MoG+ -Mouse Genome database with high added value-

BAC Information

BAC name
Region	Chromosome -
Gene	search by nearby gene name.
Format	rows / page	Page	1

BAC

Clone Name	B6Ng01-250C19
Chromosome	X (Build37)
Map Location	139,283,361 - 139,284,495
singlet/doublet	singlet
Overlap gene	none
Upstream gene	LOC633596, EG666488, LOC622901, EG436234, EG622956, Gucy2f, LOC623006, LOC100039023, Nxt2, EG434858, Kcne1l, Acsl4, Ppia-psx_1100.1, EG633736, EG245651, LOC100039086, EG436235, Tmem164
Downstream gene	Ammecr1, Rgag1, LOC209541, Chrdl1, Pak3, Capn6
Link	Open Mouse BAC browser

Click to get alignment info.

name	LOC633596 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:633596
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 5 mRNAs, 345 ESTs, 7 Proteins

name	EG666488 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:666488 MGI:3646868
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 4 ESTs, 4 Proteins pseudo : _no_value

name	LOC622901 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:622901
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 9 ESTs, 22 Proteins pseudo : _no_value

name	EG436234 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:436234 MGI:3647840
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 3 Proteins pseudo : _no_value

name	EG622956 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:622956 MGI:3647018
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 3 Proteins pseudo : _no_value

name	Gucy2f (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:245650 MGI:105119
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	LOC623006 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:623006
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 10 mRNAs, 659 ESTs, 8 Proteins pseudo : _no_value

name	LOC100039023 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:100039023
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 EST, 4 Proteins pseudo : _no_value

name	Nxt2 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:237082 MGI:2147914
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	EG434858 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:434858 MGI:3642955
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA pseudo : _no_value

name	Kcne1l (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:66240 MGI:1913490
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Acsl4 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:50790 MGI:1354713
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 3 mRNAs

name	Ppia-psx_1100.1 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:606537
definition	note : peptidylprolyl isomerase A pseudogene x_1100.1 pseudo : _no_value

name	EG633736 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:633736 MGI:3646446
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 18 ESTs, 5 Proteins

name	EG245651 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:245651 MGI:3643395
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 EST, 9 Proteins

name	LOC100039086 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:100039086
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 EST, 5 Proteins

name	EG436235 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:436235 MGI:3647841
definition	note : predicted gene, EG436235 pseudo : _no_value

name	Tmem164 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:209497 MGI:2148020
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Ammecr1 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:56068 MGI:1860206
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Rgag1 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:209540 MGI:2685231
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 mRNA

name	LOC209541 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:209541
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 56 Proteins pseudo : _no_value

name	Chrdl1 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:83453 MGI:1933172
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Pak3 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:18481 MGI:1339656
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Capn6 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:12338 MGI:1100850
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	LOC633596 (CDS detail)
type	mRNA
link	vega ensembl NCBI
xref	GI:149272406 GeneID:633596
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 5 ESTs, 2 Proteins product : similar to high mobility group nucleosomal binding domain 2, transcript variant 2 transcript_id : XM_001472120.1

name	LOC633596 (CDS detail)
type	mRNA
link	vega ensembl NCBI
xref	GI:149272408 GeneID:633596
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 5 mRNAs, 345 ESTs, 6 Proteins product : similar to high mobility group nucleosomal binding domain 2, transcript variant 1 transcript_id : XM_001472085.1

name	Gucy2f (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:56119097 GeneID:245650 MGI:105119
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : guanylate cyclase 2f transcript_id : NM_001007576.1

name	Nxt2 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:142378725 GeneID:237082 MGI:2147914
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : nuclear transport factor 2-like export factor 2 transcript_id : NM_172782.2

name	Kcne1l (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:10946897 GeneID:66240 MGI:1913490
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : potassium voltage-gated channel, Isk-related family, member 1-like transcript_id : NM_021487.1

name	Acsl4 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:75992924 GeneID:50790 MGI:1354713
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : acyl-CoA synthetase long-chain family member 4 transcript_id : NM_001033600.1

name	Acsl4 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:75992926 GeneID:50790 MGI:1354713
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : acyl-CoA synthetase long-chain family member 4 transcript_id : NM_019477.3

name	Acsl4 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:75992923 GeneID:50790 MGI:1354713
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : acyl-CoA synthetase long-chain family member 4 transcript_id : NM_207625.2

name	EG633736 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:149272417 GeneID:633736 MGI:3646446
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 18 ESTs, 5 Proteins product : predicted gene, EG633736 transcript_id : XM_001472450.1

name	EG245651 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:94408385 GeneID:245651 MGI:3643395
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 EST, 9 Proteins product : predicted gene, EG245651 transcript_id : XM_142195.5

name	LOC100039086 (CDS detail)
type	mRNA
link	vega ensembl NCBI
xref	GI:149272412 GeneID:100039086
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 EST, 5 Proteins product : similar to HL23 ribosomal protein transcript_id : XM_001472223.1

name	Tmem164 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:54633299 GeneID:209497 MGI:2148020
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : transmembrane protein 164 transcript_id : NM_177592.3

name	Ammecr1 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:118130687 GeneID:56068 MGI:1860206
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : Alport syndrome, mental retardation, midface hypoplasia and elliptocytosis chromosomal region gene 1 homolog (human) transcript_id : NM_019496.3

name	Rgag1 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:149272415 GeneID:209540 MGI:2685231
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 mRNA product : retrotransposon gag domain containing 1 transcript_id : XM_001472365.1

name	Chrdl1 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:31560015 GeneID:83453 MGI:1933172
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : chordin-like 1 transcript_id : NM_031258.2

name	Pak3 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:117606271 GeneID:18481 MGI:1339656
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : p21 (CDKN1A)-activated kinase 3 transcript_id : NM_008778.2

name	Capn6 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:34328102 GeneID:12338 MGI:1100850
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : calpain 6 transcript_id : NM_007603.2

name	LOC633596 (CDS detail)
type	CDS
link	vega ensembl NCBI
xref	GI:149272407 GeneID:633596
definition	codon_start : 1 product : hypothetical protein isoform 2 protein_id : XP_001472170.1

name	LOC633596 (CDS detail)
type	CDS
link	vega ensembl NCBI
xref	GI:149272409 GeneID:633596
definition	codon_start : 1 product : hypothetical protein isoform 1 protein_id : XP_001472135.1

name	Gucy2f (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:56119098 CCDS:CCDS30446.1 GeneID:245650 MGI:105119
definition	GO_function : GO:0005524 - ATP binding [Evidence IEA]; GO:0004383 - guanylate cyclase activity [Evidence ISS]; GO:0016849 - phosphorus-oxygen lyase activity [Evidence IEA]; GO:0004713 - protein-tyrosine kinase activity [Evidence IEA] GO_process : GO:0009190 - cyclic nucleotide biosynthesis [Evidence IEA]; GO:0007242 - intracellular signaling cascade [Evidence IEA]; GO:0006468 - protein amino acid phosphorylation [Evidence IEA] codon_start : 1 product : guanylate cyclase 2f protein_id : NP_001007577.1

name	Nxt2 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:27370162 GeneID:237082 MGI:2147914
definition	GO_function : GO:0005515 - protein binding [Evidence IPI] GO_process : GO:0006810 - transport [Evidence IEA] codon_start : 1 exception : mismatches in translation product : nuclear transport factor 2-like export factor 2 protein_id : NP_766370.1

name	Kcne1l (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:10946898 CCDS:CCDS30447.1 GeneID:66240 MGI:1913490
definition	GO_component : GO:0016020 - membrane [Evidence IEA] codon_start : 1 note : minK-like protein product : potassium voltage-gated channel, Isk-related family, member 1-like protein_id : NP_067462.1

name	Acsl4 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:46518528 CCDS:CCDS30448.1 GeneID:50790 MGI:1354713
definition	EC_number : 6.2.1.3 GO_component : GO:0016020 - membrane [Evidence IEA]; GO:0005777 - peroxisome [Evidence IEA] GO_function : GO:0003824 - catalytic activity [Evidence IEA]; GO:0016874 - ligase activity [Evidence IEA]; GO:0004467 - long-chain-fatty-acid-CoA ligase activity [Evidence IEA] [Evidence ISS]; GO:0000287 - magnesium ion binding [Evidence IEA] GO_process : GO:0006631 - fatty acid metabolism [Evidence IEA]; GO:0006629 - lipid metabolism [Evidence IEA]; GO:0008152 - metabolism [Evidence IEA]; GO:0019217 - regulation of fatty acid metabolism [Evidence TAS] codon_start : 1 note : isoform 1 is encoded by transcript variant 1; fatty acid-Coenzyme A ligase, long chain 4 product : acyl-CoA synthetase long-chain family member 4 isoform 1 protein_id : NP_997508.1

name	Acsl4 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:75992925 GeneID:50790 MGI:1354713
definition	EC_number : 6.2.1.3 GO_component : GO:0016020 - membrane [Evidence IEA]; GO:0005777 - peroxisome [Evidence IEA] GO_function : GO:0003824 - catalytic activity [Evidence IEA]; GO:0016874 - ligase activity [Evidence IEA]; GO:0004467 - long-chain-fatty-acid-CoA ligase activity [Evidence IEA] [Evidence ISS]; GO:0000287 - magnesium ion binding [Evidence IEA] GO_process : GO:0006631 - fatty acid metabolism [Evidence IEA]; GO:0006629 - lipid metabolism [Evidence IEA]; GO:0008152 - metabolism [Evidence IEA]; GO:0019217 - regulation of fatty acid metabolism [Evidence TAS] codon_start : 1 note : isoform 2 is encoded by transcript variant 3; fatty acid-Coenzyme A ligase, long chain 4 product : acyl-CoA synthetase long-chain family member 4 isoform 2 protein_id : NP_001028772.1

name	Acsl4 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:75992927 GeneID:50790 MGI:1354713
definition	EC_number : 6.2.1.3 GO_component : GO:0016020 - membrane [Evidence IEA]; GO:0005777 - peroxisome [Evidence IEA] GO_function : GO:0003824 - catalytic activity [Evidence IEA]; GO:0016874 - ligase activity [Evidence IEA]; GO:0004467 - long-chain-fatty-acid-CoA ligase activity [Evidence IEA] [Evidence ISS]; GO:0000287 - magnesium ion binding [Evidence IEA] GO_process : GO:0006631 - fatty acid metabolism [Evidence IEA]; GO:0006629 - lipid metabolism [Evidence IEA]; GO:0008152 - metabolism [Evidence IEA]; GO:0019217 - regulation of fatty acid metabolism [Evidence TAS] codon_start : 1 note : isoform 2 is encoded by transcript variant 2; fatty acid-Coenzyme A ligase, long chain 4 product : acyl-CoA synthetase long-chain family member 4 isoform 2 protein_id : NP_062350.3

name	EG633736 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:149272418 GeneID:633736 MGI:3646446
definition	codon_start : 1 product : similar to 60S ribosomal protein L38 protein_id : XP_001472500.1

name	EG245651 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:38086823 GeneID:245651 MGI:3643395
definition	codon_start : 1 product : similar to Coiled-coil-helix-coiled-coil-helix domain containing 2 protein_id : XP_142195.3

name	LOC100039086 (CDS detail)
type	CDS
link	vega ensembl NCBI
xref	GI:149272413 GeneID:100039086
definition	codon_start : 1 product : similar to HL23 ribosomal protein protein_id : XP_001472273.1

name	Tmem164 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:54633300 CCDS:CCDS30451.1 GeneID:209497 MGI:2148020
definition	GO_component : GO:0016021 - integral to membrane [Evidence IEA] codon_start : 1 product : hypothetical protein LOC209497 protein_id : NP_808260.2

name	Ammecr1 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:9506383 CCDS:CCDS30452.1 GeneID:56068 MGI:1860206
definition	GO_component : GO:0005575 - cellular_component [Evidence ND] GO_function : GO:0003674 - molecular_function [Evidence ND] GO_process : GO:0008150 - biological_process [Evidence ND] codon_start : 1 product : AMMECR1 protein protein_id : NP_062369.1

name	Rgag1 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:149272416 GeneID:209540 MGI:2685231
definition	codon_start : 1 product : retrotransposon gag domain containing 1 protein_id : XP_001472415.1

name	Chrdl1 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:31560016 CCDS:CCDS30453.1 GeneID:83453 MGI:1933172
definition	GO_process : GO:0030154 - cell differentiation [Evidence IEA]; GO:0007275 - development [Evidence IEA]; GO:0007399 - nervous system development [Evidence IEA]; GO:0001503 - ossification [Evidence IEA] codon_start : 1 note : ventroptin-beta; ventroptin-alpha; verntroptin-beta; neuralin 1 product : chordin-like 1 protein_id : NP_112548.2

name	Pak3 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:117606272 CCDS:CCDS30454.1 GeneID:18481 MGI:1339656
definition	GO_function : GO:0005524 - ATP binding [Evidence IEA]; GO:0003824 - catalytic activity [Evidence IEA]; GO:0016301 - kinase activity [Evidence IEA]; GO:0000287 - magnesium ion binding [Evidence IEA]; GO:0046872 - metal ion binding [Evidence IEA]; GO:0000166 - nucleotide binding [Evidence IEA]; GO:0005515 - protein binding [Evidence IPI]; GO:0004672 - protein kinase activity [Evidence IEA]; GO:0004674 - protein serine/threonine kinase activity [Evidence IEA]; GO:0016740 - transferase activity [Evidence IEA] GO_process : GO:0007275 - development [Evidence IEA]; GO:0006468 - protein amino acid phosphorylation [Evidence IEA] codon_start : 1 note : Cdc42/Rac effector kinase product : p21 (CDKN1A)-activated kinase 3 protein_id : NP_032804.2

name	Capn6 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:34328103 CCDS:CCDS30455.1 GeneID:12338 MGI:1100850
definition	GO_component : GO:0005622 - intracellular [Evidence IEA] GO_function : GO:0004198 - calpain activity [Evidence IEA]; GO:0004197 - cysteine-type endopeptidase activity [Evidence IEA] GO_process : GO:0006508 - proteolysis [Evidence IEA] codon_start : 1 exception : mismatches in translation product : calpain 6 protein_id : NP_031629.2

name	EG436234 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:436234
definition	number : 1 pseudo : _no_value

name	EG622956 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:622956
definition	number : 1 pseudo : _no_value

name	LOC209541 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:209541
definition	number : 1 pseudo : _no_value

name	EG666488 (CDS detail)
type	misc_RNA
link	vega ensembl MGI NCBI
xref	GI:149272405 GeneID:666488 MGI:3646868
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 4 ESTs, 4 Proteins product : predicted gene, EG666488 pseudo : _no_value transcript_id : XR_035647.1

name	LOC622901 (CDS detail)
type	misc_RNA
link	vega ensembl NCBI
xref	GI:149272411 GeneID:622901
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 9 ESTs, 22 Proteins product : similar to heat shock protein 1, beta pseudo : _no_value transcript_id : XR_030584.1

name	LOC623006 (CDS detail)
type	misc_RNA
link	vega ensembl NCBI
xref	GI:149272414 GeneID:623006
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 10 mRNAs, 659 ESTs, 8 Proteins product : similar to retinoblastoma-binding protein mRbAp46 pseudo : _no_value transcript_id : XR_030613.1

name	LOC100039023 (CDS detail)
type	misc_RNA
link	vega ensembl NCBI
xref	GI:149272410 GeneID:100039023
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 EST, 4 Proteins product : similar to 60S ribosomal protein pseudo : _no_value transcript_id : XR_030569.1

name	EG434858 (CDS detail)
type	misc_RNA
link	vega ensembl MGI NCBI
xref	GI:85060509 GeneID:434858 MGI:3642955
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : predicted gene, EG434858 pseudo : _no_value transcript_id : NR_002883.1

clone name	MSMg01-341P16
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-352B10
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-306H20
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-321O24
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-393D14
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-529K22
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-173L21
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-117L06
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-372H14
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-271M03
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-524B08
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-486P01
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-117P22
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-047J16
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-072B01
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-499I10
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-466F20
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-333O03
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-378K11
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-064P22
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-067A06
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-465A02
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-497D22
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-160B24
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-045F14
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-333C14
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-323C08
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-308C16
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-075H07
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-501P02
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-445M18
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-512J12
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-441M13
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-205D05
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-385P20
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-311G18
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-133H04
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-503G02
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-333N10
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-371O13
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-177H21
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-084C22
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-307F07
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-543P19
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-300L15
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-173K03
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-470K18
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-317F05
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-435B24
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-442I20
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-062N07
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-047F01
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-464D20
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-543P19
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-157J09
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-453E19
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-410L15
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-380F20
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-523K03
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-538M20
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-494N12
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-086F15
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-153K12
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-387N22
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-129B05
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-498A14
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-337F16
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-343B14
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-141B18
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-508C20
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-306O19
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-306O17
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-120J10
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-303M01
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-342O02
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-232A17
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-182F03
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-142O14
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-247H06
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-158B21
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-240N09
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-058G22
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-321G07
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-269G03
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-333J13
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-016J17
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-023C13
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-047H09
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-242E07
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-200C11
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-180A11
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-036C05
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-340G09
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-184E02
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-227N05
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-224M04
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-092H10
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-122N14
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-016B04
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-179B22
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-349P10
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-305N04
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-068P12
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-041L07
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-042N24
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-186C08
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-015J01
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-032H16
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-159J14
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-250C19
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-328D05
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-087E01
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-009I22
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-173O15
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-283I13
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-003E06
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-074P10
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-005N03
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-003E06
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-136J17
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-102L06
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-045B01
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-110O07
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-330E09
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-054O04
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-144J10
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-106A19
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-049M09
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-001O21
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-095J05
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-088C10
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-062P07
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-010D16
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-002P03
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-041N07
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-104L03
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-290I10
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-091N24
singlet/doublet	doublet
plural/unique	unique

BAC End Information

BAC end	BAC-end 1	BAC-end 2
end name	B6Ng01-250C19.b	B6Ng01-250C19.g
ACC	GA057795	GA057796
length	1,234	1,156
definition	B6Ng01-250C19.b	B6Ng01-250C19.g
singlet/doublet	---	singlet
BLAST hit	no hit data	unique
sequence	gaattctttgttcagttctgagccccattttttaagggggttatttgatt ttctgaggtccaccttcttgagttctttatatatgttggatattagtccc ctatctgatttaggataggtaaagatcctttcccagtctgttggtggtct ttttgtcttatagacagtgtcttttgccttgcagaaactttggagtttca ttaggtcccatttgtcaattctcgatcttacagcacaagccattgctgtt ctgttcaggaatttttcccctgtgcccatatcttcaaggcttttccccac tttctcctctataagtttcagtgtctctggttttatgtgaagttccttga tccacttagatttgaccttagtacaaggagataagcatggatcgattcgc attcttctacatgataacaaccagttgtgccagcaccaattgttgaaaat gctgtctttcttccactggatggttttggctcccttgtcgaagatcaagt gaccataggtgtgtgggttcatttctgggtcttcaattctattccattgg tccacttgtctgtctctataccagtaccatgcagtttttatcacaattgc tctgtagtaaagctttaggtcaggcatggtgattccaccagaggttcttt tatccttgagaagagtttttgctatcctcggttttttgttattccagatg aatttgcaaattgctccttctaattcgttgaagaattgagttggaatttt aatggggattgcattgaatctgtagattgcttttggcaagatagccattt ttacaatgttggtcctgccaatccatgagcatgggagatctttccatctt ctgagatcttctttaatttctttcttcagggacttgaagtttttatcata cagatctttcacttccttcgttagagtcacgccgagatattttatattat ttgtggctatgagaaggtgttgtttccctaatttcttttctcagcctgtt ttattctttgtgtagagaaggccattgaccttgtttgagttaattttata tccagcttcttccaccgagccttgtttatcaagtttaggagtctcctgtt ggaattttaaggtcacttataataatctatccatatcatctctgcaaggt gaatatttggctctcctctttccattgaatccttgatccttgattgcaac gtccttcgcctaatcttctcgagtactcatgtgt	gaattcttgataactgcccatctgtgtttgcccggggttttcagtttcaa gagggaaagctaaatgggagactgcagctaagaaaagctcttggtttttt gttgttgttttgttgttgttttggcaaccgtattgaaaggtaccatctcc atacctgaaacccccaagcctgatagaagaaatctctgaagaaatggaag ggattatgttaagtgccatttagaaacgaggctaattttgccaaaaagct tggatgtcatctctttaaaatgacaaaaaagagtggagctatagagccgg gtgtggtggcgcacgcctttaatcccagcactcgggaggcagaggcagag gcaggcagatttctgagttcgaggccagcctggtctacaaagtgagttcc aggacagcctgggctatacagagaaaccctgtctcaaaaaaaaaaaaaaa aaaaagagtggagctatagttcagttacagagttcttgtctaacgagtgt gaggccctggattgaatgcctagcaccacccagaaaaatggctctgtaac aatatacagattccccatctgtggggaatcataccaagtctgacagtaga aagccccaatatacactattttgcctataactgcctataatatagcataa tttgtaaattaggcccagtcagacattaataactcagaataggtgtgata atgtgctgcaatataattgtcagcatcactactcttgtttgtgacattat taagtaaaataaggcttctgtgagccctaagactgtagtagtgcagtttt caatctgattacgagagaactgttaagtgggctaacagggtaggtacagg gagatgcagtagacaaagggatagctcacaccctgaacaagaaagatagt gcaatggtgtcagattttcttcatactgcccctaacacaatccaatttga aaacacaaatactatttttctgggaacctttccatgtaataattggtcgt actgtggtgacctgcggggttatggtgaattcacagaaggaaatgggaag ctttcataatgttcagtgggttactgtttttattctccaagcctttagtg gggagttgtctcagtgagcctgttcagaggatggacttatgcgcgatgat aacagg
quality values	Open. Hide. 38 31 17 28 62 47 47 62 62 47 62 62 22 14 47 62 62 62 47 47 62 62 62 49 62 54 44 62 62 62 62 59 43 43 20 32 49 38 49 37 59 59 62 59 62 62 59 62 59 62 62 62 62 62 62 62 62 54 62 62 59 56 62 62 62 62 62 62 62 62 62 62 62 62 62 62 54 62 62 62 62 62 62 62 62 62 62 62 62 59 62 62 59 59 59 62 62 62 62 62 62 59 62 62 62 62 62 62 62 62 62 59 62 62 54 62 62 62 62 62 62 62 62 62 59 62 62 62 62 62 62 62 62 62 59 62 59 62 62 62 62 62 62 62 62 62 62 59 59 54 62 54 54 62 62 62 62 62 62 62 62 59 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 59 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 59 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 59 59 56 54 62 56 62 59 54 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 59 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 59 59 62 62 62 62 59 62 62 62 59 54 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 59 62 62 62 62 62 62 62 62 62 59 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 59 62 62 62 62 62 59 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 54 62 62 62 49 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 46 62 62 49 54 62 62 62 62 62 62 54 54 62 62 62 62 56 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 54 54 62 62 62 41 62 62 62 52 62 62 62 62 62 62 62 62 62 62 62 58 58 52 58 54 58 58 58 58 54 58 54 58 54 58 58 58 58 58 58 58 49 58 54 54 58 42 54 58 54 58 58 58 58 58 58 58 49 58 52 58 54 48 58 58 58 48 58 58 58 58 54 47 58 52 54 54 46 58 58 52 58 58 43 47 58 36 28 47 54 48 30 48 44 50 42 42 34 58 58 54 53 54 58 58 50 40 52 46 50 51 51 51 58 28 58 49 29 58 24 50 58 58 58 58 49 50 49 50 52 52 58 50 49 33 54 50 58 58 58 58 42 28 14 19 34 53 29 32 37 29 31 54 39 50 58 25 46 58 58 47 50 32 58 48 49 50 49 47 50 41 46 37 40 50 39 58 52 39 49 49 33 39 58 50 58 58 28 49 18 28 58 50 51 29 49 46 50 40 38 39 46 54 33 16 24 41 41 54 54 54 53 53 30 33 49 40 37 40 49 35 51 47 37 49 39 53 32 49 37 53 32 19 41 42 42 54 54 32 44 35 29 39 46 45 37 24 45 29 37 44 23 31 54 54 54 17 23 29 19 37 28 53 34 42 35 51 15 16 32 24 34 28 42 23 33 37 40 16 12 23 41 39 18 42 32 35 31 49 36 53 30 41 23 31 34 53 45 27 34 18 37 42 32 41 31 31 43 40 17 29 24 28 26 24 31 31 51 31 26 30 33 51 18 15 31 46 31 24 31 28 34 11 28 46 22 31 25 27 8 14 18 24 18 42 48 48 48 33 31 20 26 29 31 24 25 28 17 31 34 29 28 46 41 31 30 26 38 35 29 11 19 19 30 27 38 21 25 27 42 22 34 35 27 26 26 27 32 16 39 23 31 18 24 30 48 46 29 27 13 14 26 14 31 17 44 21 32 21 26 31 27 38 18 8 5 17 22 24 15 17 29 23 31 18 25 17 14 48 21 19 44 24 31 23 31 24 43 24 19 15 43 32 9 19 29 26 19 14 32 21 8 24 7 36 31 8 16 16 23 14 13 39 26 30 18 30 12 14 6 16 15 17 7 4 6 12 16 17 18 23 27 10 6 8 21 5 4 4 32 11 19 25 13 27 15 11 15 24 38 33 21 21 6 13 10 15 18 15 16 18 12 6 6 3 6 6 6 10 10 27 5 20 5 24 5 4 4 3 3 26 15 7 10 8 6 6 27 6 30 20 8 17 9 19 6 11 8 7 5 10 16 22 7 15 10 8 7 7 8 28 23 20 7 5 4 10 6 5 5 5 7 11 9 6 4 4 5 4 8 5 11 8 20 9 7 9 8 7 13 7 4 3 1 4 11 4 5 14 8 3 3 6 10 4 9 8 7 8 13 4 17 12 2 7 7 6 4 5 6 20 4 8 9 14 18 3 5 2 3 3 5 3 6 7 14 5 2 3 5 8 6 9 4 3 3 6 7 13 5 6 3 3 2 1 1 5 14 10 6 7 5 15 5 4 3 8 11 4 5 6 15 5 4 4 4 7 3 2 2 3 4 3 2 3 11 4 4 5	Open. Hide. 62 59 59 59 62 62 62 62 62 59 62 34 34 34 32 38 28 32 33 27 56 59 62 62 54 62 62 62 62 59 62 62 62 62 62 62 62 62 62 54 62 59 59 62 62 62 62 59 51 59 62 62 62 62 62 62 62 62 62 59 59 50 48 48 59 62 62 62 62 62 59 59 62 62 62 62 62 62 59 62 62 62 62 62 62 62 62 62 62 62 54 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 54 54 62 62 62 62 59 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 59 62 62 62 62 62 62 59 62 62 62 62 62 62 62 56 59 59 62 62 62 62 54 49 62 62 62 62 62 62 62 62 62 62 62 62 59 62 62 62 62 62 62 62 62 62 62 62 62 54 62 62 59 59 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 59 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 59 59 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 59 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 59 62 62 62 62 62 62 62 62 62 62 59 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 56 56 56 50 49 46 56 62 56 62 51 62 62 62 62 62 56 62 62 62 62 56 62 62 56 62 37 56 62 56 46 56 62 62 62 62 56 62 43 56 56 56 56 56 40 38 56 27 41 47 62 62 56 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 52 54 62 42 62 62 62 62 48 62 62 62 54 54 54 58 58 52 58 58 58 54 45 58 58 58 52 58 58 52 54 54 58 54 54 58 58 58 58 58 58 54 38 58 54 54 58 52 58 58 54 52 58 47 37 54 54 54 52 54 40 52 54 58 58 54 58 58 58 47 52 49 52 53 33 58 58 58 40 58 58 49 41 47 58 49 48 49 50 51 40 58 52 58 58 58 58 58 54 48 58 41 46 49 48 50 54 54 58 58 51 37 50 52 54 47 50 50 50 51 49 50 31 49 53 42 47 58 49 54 39 41 58 46 49 49 32 50 51 52 58 51 50 50 53 52 40 33 46 30 50 54 51 38 52 41 33 49 50 52 40 32 27 58 47 50 42 16 58 32 38 50 43 33 29 41 50 49 54 53 54 46 54 37 35 53 38 35 41 35 26 38 39 50 50 44 49 34 39 53 32 49 53 34 47 37 32 53 45 52 52 30 47 42 54 31 52 40 40 37 30 30 51 33 33 53 26 26 46 53 33 37 54 54 44 38 45 35 22 46 25 33 25 39 32 47 32 31 53 16 52 40 40 18 26 53 24 33 18 29 40 31 32 15 35 37 26 32 45 23 32 24 33 52 51 42 31 16 18 31 31 28 31 31 16 21 16 30 19 51 20 41 19 31 29 26 25 30 27 9 8 31 28 18 31 51 26 22 31 31 38 28 9 6 40 33 23 31 15 46 25 24 31 25 18 42 19 32 8 14 11 29 26 24 16 6 22 9 31 18 32 46 22 31 47 26 30 21 31 23 27 11 12 21 27 32 31 41 28 24 13 46 5 19 16 34 14 44 46 37 29 30 25 31 22 26 30 21 16 13 16 31 34 24 31 18 17 15 11 29 14 48 48 19 28 13 30 12 11 11 20 31 21 29 31 41 30 21 21 31 26 26 31 31 22 21 42 16 30 9 25 18 24 9 7 17 21 43 19 15 9 19 9 22 21 23 13 7 15 4 7 31 39 31 5 6 14 19 39 9 28 16 24 33 6 43 17 37 10 10 18 15 22 33 13 14 6 14 19 29 11 21 24 29 8 5 13 20 24 16 5 4 15 4 12 28 13 14 6 7 5 5 33 47 6 14 10 15 24 13 8 10 6 7 7 6 13 14 10 16 12 8 5 3 3 5 15 40 22 6 6 28 14 18 18 18 27 8 29 11 17 7 11 10 17 4 9 12 21 17 15 6 4 10 14 20 4 6 11 15 8 6 6 14 16 8 4 7 4 7 8 10 11 10 11 4 6 13 8 7 26 9 15 10 7 6 30 28 8 19 5 10 5 2 3 5 5 6 6 4 5 4 6 4 6 10 5 8 7 8 21 5 8 13 5 11 5 7 7 5 2 1 2 6 7 7 5 3 6 18 3 3 4 11 7 5 3 3 6 4 12 30

Alignment Information

BAC End 1

BAC End 2

seq1: chrX_139283361_139284495
seq2: B6Ng01-250C19.g_69_1224 (reverse)

seq1  CCTGTTTACAATCGCGCATATGTCCATCCTCTG-ACA-GCTCACTGAG--  46
      |||| |||  |||||||||| |||||||||||| ||| ||||||||||  
seq2  CCTG-TTATCATCGCGCATAAGTCCATCCTCTGAACAGGCTCACTGAGAC  49

seq1  CACTCCCACTTAAAGGCTTGGAGA--TAAAACAGT-ACCCACTGAACATT  93
       ||||||   ||||||||||||||   |||||||| ||||||||||||||
seq2  AACTCCCCACTAAAGGCTTGGAGAATAAAAACAGTAACCCACTGAACATT  99

seq1  ATG-AAGCTTCCATTTTCCTTCTGTGATTTCA-CATA--CCCGCAGGTCA  139
      ||| ||||||||  ||||||||||||| |||| ||||  |||||||||||
seq2  ATGAAAGCTTCCCATTTCCTTCTGTGAATTCACCATAACCCCGCAGGTCA  149

seq1  CCACAGTACGAC--AATATTACATGG-AAGGTT-CCAGAAATA-AGTATT  184
      ||||||||||||  | |||||||||| |||||| ||||||| | ||||||
seq2  CCACAGTACGACCAATTATTACATGGAAAGGTTCCCAGAAAAATAGTATT  199

seq1  TGTGTTTTC-AATTGGATTGTGTTAGGGGCAGTATGAAG-AAATCTGACA  232
      ||||||||| ||||||||||||||||||||||||||||| ||||||||||
seq2  TGTGTTTTCAAATTGGATTGTGTTAGGGGCAGTATGAAGAAAATCTGACA  249

seq1  CCATTGCACTATCTTTCTTGTTCAGGGTGTGAGCTATCCCTTTGTCTACT  282
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCATTGCACTATCTTTCTTGTTCAGGGTGTGAGCTATCCCTTTGTCTACT  299

seq1  GCATCT-CCTGTACCTA-CCTGTTAG-CCACTTAACAGTTCTCTCGTAAT  329
      |||||| |||||||||| |||||||| |||||||||||||||||||||||
seq2  GCATCTCCCTGTACCTACCCTGTTAGCCCACTTAACAGTTCTCTCGTAAT  349

seq1  CAGATTGAAAACTGCACTACTACAGTCTTAGGGCTCACAGAAGCCTTATT  379
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGATTGAAAACTGCACTACTACAGTCTTAGGGCTCACAGAAGCCTTATT  399

seq1  TTACTTAATAATGTCACAAACAAGAGTAGTGATGCTGACAATTATATTGC  429
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTACTTAATAATGTCACAAACAAGAGTAGTGATGCTGACAATTATATTGC  449

seq1  AGCACATTATCACACCTATTCTGAGTTATTAATGTCTGACTGGGCCTAAT  479
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCACATTATCACACCTATTCTGAGTTATTAATGTCTGACTGGGCCTAAT  499

seq1  TTACAAATTATGCTATATTATAGGCAGTTATAGGCAAAATAGTGTATATT  529
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTACAAATTATGCTATATTATAGGCAGTTATAGGCAAAATAGTGTATATT  549

seq1  GGGGCTTTCTACTGTCAGACTTGGTATGATTCCCCACAGATGGGGAATCT  579
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGGCTTTCTACTGTCAGACTTGGTATGATTCCCCACAGATGGGGAATCT  599

seq1  GTATATTGTTACAGAGCCATTTTTCTGGGTGGTGCTAGGCATTCAATCCA  629
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTATATTGTTACAGAGCCATTTTTCTGGGTGGTGCTAGGCATTCAATCCA  649

seq1  GGGCCTCACACTCGTTAGACAAGAACTCTGTAACTGAACTATAGCTCCAC  679
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGCCTCACACTCGTTAGACAAGAACTCTGTAACTGAACTATAGCTCCAC  699

seq1  TC-TTTTTTTTTTTTTTTTTTTGAGACAGGGTTTCTCTGTATAGCCCAGG  728
      || |||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTTTTTTTTTTTTTTTTTTTTGAGACAGGGTTTCTCTGTATAGCCCAGG  749

seq1  CTGTCCTGGAACTCACTTTGTAGACCAGGCTGGCCTCGAACTCAGAAATC  778
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGTCCTGGAACTCACTTTGTAGACCAGGCTGGCCTCGAACTCAGAAATC  799

seq1  TGCCTGCCTCTGCCTCTGCCTCCCGAGTGCTGGGATTAAAGGCGTGCGCC  828
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCCTGCCTCTGCCTCTGCCTCCCGAGTGCTGGGATTAAAGGCGTGCGCC  849

seq1  ACCACACCCGGCTCTATAGCTCCACTCTTTTTTGTCATTTTAAAGAGATG  878
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCACACCCGGCTCTATAGCTCCACTCTTTTTTGTCATTTTAAAGAGATG  899

seq1  ACATCCAAGCTTTTTGGCAAAATTAGCCTCGTTTCTAAATGGCACTTAAC  928
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACATCCAAGCTTTTTGGCAAAATTAGCCTCGTTTCTAAATGGCACTTAAC  949

seq1  ATAATCCCTTCCATTTCTTCAGAGATTTCTTCTATCAGGCTTGGGGGTTT  978
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATAATCCCTTCCATTTCTTCAGAGATTTCTTCTATCAGGCTTGGGGGTTT  999

seq1  CAGGTATGGAGATGGTACCTTTCAATACGGTTGCCAAAACAACAACAAAA  1028
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGGTATGGAGATGGTACCTTTCAATACGGTTGCCAAAACAACAACAAAA  1049

seq1  CAACAACAAAAAACCAAGAGCTTTTCTTAGCTGCAGTCTCCCATTTAGCT  1078
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAACAACAAAAAACCAAGAGCTTTTCTTAGCTGCAGTCTCCCATTTAGCT  1099

seq1  TTCCCTCTTGAAACTGAAAACCCCGGGCAAACACAGATGGGCAGTTATCA  1128
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCCCTCTTGAAACTGAAAACCCCGGGCAAACACAGATGGGCAGTTATCA  1149

seq1  AGAATTC  1135
      |||||||
seq2  AGAATTC  1156

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Alignment Information