BAC Information

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BAC

Clone NameB6Ng01-255A21
ChromosomeX (Build37)
Map Location 112,427,371 - 112,428,029
singlet/doubletsinglet
Overlap genenone
Upstream geneLOC100039201, Klhl4, Gm1866, EG546361, EG237009, 4930524E20Rik, LOC237008, EG664969, EG546362
Downstream geneLOC100039255, LOC623913, LOC546363, LOC100039277
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-255A21.bB6Ng01-255A21.g
ACCGA061359GA061360
length1,0111,173
definitionB6Ng01-255A21.b B6Ng01-255A21.g
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattctacacagatttcttatactaaatgcattgtaaagcagagcactt
tgtgttcacagtttagtttctaggtatgctttaaatattacatattttcc
cttgtttccttaaatcgcactgtattcttttctaacatcattttttcctc
cacacattttcaataattaagagctgctgtctgctacatcagtaaaatag
ctggatctgctataaaacaaatgaaaacctggcaaaatttctgtcagagt
aaactatttcagatctctgtttgctaactaaaagcttagaacaaaggtat
caacacaaggacgatttccaggtgctttagctgattctcacctatttgca
agacaacacctcaatgttagcctatttggtttaggtaatttgtaattttc
attgcttaagaattgcatacatgtgtataataggccaatctcccatccat
gcttagattttgattagctaggcatattttgtgtgtatagacatagctgt
tgcgacttcatgtgtgcaattagcattgtcgtatctaggaaatatttagt
tgcagaggtacactacctctgactcttaatttttttttgacccatttctg
agatgattcctcatattcaatgggaggctgggtgtgggggtgcatgcaag
tagaacatgctgaagaaggagacatgagcttttcactgatgatagaggaa
gtatacataagtgatcccaaataatctatcagagctaacaaacactttaa
gcaaagtggatggatgtaaaattaactcaacaacaacaacaacaacaaca
acaaacaaacaaaaatagtagccttcctttatacaaataatatacaggtt
tagaaaaaatgtagagaaacaacaagcttcacaatagtcacaaataatat
aatatatcttggagtaactctaaccaagaaagtgaaacaacttcaagtct
ctgaagaaagaaattgaaaaagatatcagaaaatggaaagattgcccatg
ctcatggcaaa

gaattctcacctgaggaataccgaatggtagagaagcacttgaaaaaaat
gttcaacatccttaatcatcagggaaatgcaaatcaaaacaaccctgaga
ttccacctcacaccagtcagaatggctaagatcaaaaattcaggtgacag
cagatgctggcgtggatgtggagaaagaggaacactcctccattgttggt
gggattgcaggcttgtacaaccaccatggaaatcagtctggcggttcctc
agaaaactggacatagtactaccggaggatccagcaatacctctcctggg
catatatccagaagatgccccaactggtaagaaggacacatgctccacta
tgttcatagcagccttatttataatagccagaagctggaaagaacctaga
tgcccctcaacagaggaatggatatagaaaatgtggtacatctacacaat
ggagtactactcagctattaaaaagaatgaatttatgaaattcctagcca
aatggatggacctggagggcatcatcctgagtgaggtaacacattcacaa
agaaactcacacaatatgtactcactgataagtggatattagccccaaac
ctaggatacccaagatataagatataatttgctaaacacatgaaactcaa
gaagaatgaagactgaagtgtggacactatgcccctccttagatttggga
acaaaacacccatggaaggagttacagagacaaagtttggagctgagatg
aaaggatggaccatgtagagactgccatatccagggatccaccctataat
cagcatccaaacgctgacaccattgcatacactagcaagattttattgaa
aggacccagatgtagctgtctcttgtgagactatgcccgggccctagcaa
acacagagtggatgctccacagtcagctaatggatggatcatagggctcc
cagtgagagctagagaagtagcccagaagctaaagggatctgcacctata
gtgacacaatatgacttacagtaccccggagctctgactctagctgcatt
attaatcaagatgacttagtcggccatcaacttgcaaagagagccattgg
aacttgcaacttaatgccagatcagatccataggctaataggggaactgc
gtggatctacggggaatgtgtgt
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chrX_112427371_112428029
seq2: B6Ng01-255A21.b_45_703 (reverse)

seq1  CATGTTCTACTTGCATGCACCCCCACACCCAGCCTCCCATTGAATATGAG  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATGTTCTACTTGCATGCACCCCCACACCCAGCCTCCCATTGAATATGAG  50

seq1  GAATCATCTCAGAAATGGGTCAAAAAAAAATTAAGAGTCAGAGGTAGTGT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATCATCTCAGAAATGGGTCAAAAAAAAATTAAGAGTCAGAGGTAGTGT  100

seq1  ACCTCTGCAACTAAATATTTCCTAGATACGACAATGCTAATTGCACACAT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCTCTGCAACTAAATATTTCCTAGATACGACAATGCTAATTGCACACAT  150

seq1  GAAGTCGCAACAGCTATGTCTATACACACAAAATATGCCTAGCTAATCAA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAGTCGCAACAGCTATGTCTATACACACAAAATATGCCTAGCTAATCAA  200

seq1  AATCTAAGCATGGATGGGAGATTGGCCTATTATACACATGTATGCAATTC  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATCTAAGCATGGATGGGAGATTGGCCTATTATACACATGTATGCAATTC  250

seq1  TTAAGCAATGAAAATTACAAATTACCTAAACCAAATAGGCTAACATTGAG  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAAGCAATGAAAATTACAAATTACCTAAACCAAATAGGCTAACATTGAG  300

seq1  GTGTTGTCTTGCAAATAGGTGAGAATCAGCTAAAGCACCTGGAAATCGTC  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGTTGTCTTGCAAATAGGTGAGAATCAGCTAAAGCACCTGGAAATCGTC  350

seq1  CTTGTGTTGATACCTTTGTTCTAAGCTTTTAGTTAGCAAACAGAGATCTG  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTGTGTTGATACCTTTGTTCTAAGCTTTTAGTTAGCAAACAGAGATCTG  400

seq1  AAATAGTTTACTCTGACAGAAATTTTGCCAGGTTTTCATTTGTTTTATAG  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAATAGTTTACTCTGACAGAAATTTTGCCAGGTTTTCATTTGTTTTATAG  450

seq1  CAGATCCAGCTATTTTACTGATGTAGCAGACAGCAGCTCTTAATTATTGA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGATCCAGCTATTTTACTGATGTAGCAGACAGCAGCTCTTAATTATTGA  500

seq1  AAATGTGTGGAGGAAAAAATGATGTTAGAAAAGAATACAGTGCGATTTAA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAATGTGTGGAGGAAAAAATGATGTTAGAAAAGAATACAGTGCGATTTAA  550

seq1  GGAAACAAGGGAAAATATGTAATATTTAAAGCATACCTAGAAACTAAACT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGAAACAAGGGAAAATATGTAATATTTAAAGCATACCTAGAAACTAAACT  600

seq1  GTGAACACAAAGTGCTCTGCTTTACAATGCATTTAGTATAAGAAATCTGT  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGAACACAAAGTGCTCTGCTTTACAATGCATTTAGTATAAGAAATCTGT  650

seq1  GTAGAATTC  659
      |||||||||
seq2  GTAGAATTC  659


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