BAC Information

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BAC

Clone NameB6Ng01-255J12
ChromosomeX (Build37)
Map Location 60,296,476 - 60,297,528
singlet/doubletsinglet
Overlap genenone
Upstream geneLOC385367, LOC671741, 4933402E13Rik, 4931400O07Rik, 1700019B21Rik, LOC671878, LOC666695, EG627420
Downstream genenone
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-255J12.bB6Ng01-255J12.g
ACCGA061764GA061765
length1,1961,183
definitionB6Ng01-255J12.b B6Ng01-255J12.g
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattcagtaaggaagttacctattcagcaactaattaggcattacaaag
atggagccagcagctcagggctggtctgcagagtgtttactaagacagtt
aggactgtcttaaccaaataagggtttaccatgagaaaagttagagaatc
ctactgagacaggtttcttcactaagcccaaagaaatcaggcagaactat
agagcataaataaattttatgcctcagtccagcctttttttaaaaaaaaa
atgttaataactgggagtagatgtagcctccaacaagcctgaagcaggcc
gagccagaccttgactttgttgccactaaggagataacttagggtggagc
ctgcctccctggatcactctattgttcagccattgcagctgctgctacct
gctgtgatttggcctagctaatctggagaccacacatagtcacctgaagc
tgggctccaaggatgatttggcgggaatgggcttcccctctcctttataa
agcatgtctgccattaaaaatttgagccttgatcagaatactgttttggt
tccatctctctctctctcttgtctgcctagtttccttttctttcagctcc
aagatgcttcccaggctcgaacctggacatgagagctgcaggctggcccc
aacatgagttgtgtttctattgatataaatgttggttttatttcctcaaa
tgaaaggatgagagaagaactgtacacaagattcaaattgacctctctca
ccttctgattatttttattatttatttcaccacatgttcatttatttaac
catttgtgttgtctgtttttgtcaacatgaattgctctgcttggagaacc
tgcctgtggacttcataaactgaattgcactgcattgagtgaatgaacag
aatggaaccaaatggaactgcatgaactcaactgaactcaactgcactca
actgcactcaactgaactcaacataacttcacctttcttgctgcactttt
tagtagcctctttcctgtctgttcttattagtgatggtgtccctacatga
ctcattccctcaaatctatctttaatgacatcagattagctctaggcaag
cttattggttgttttctgataaatttagagatccagatattggtgagaaa
tgcctgtgttgtggaaactgaacagtgatgtggcaagcatgtcagt

gaattcacaacagaggactctaatggttgagaagcagttaaggagatgtt
caacacccttagtcatcagggaagtgcaaatcacagtgacactgatattc
tgtcttatatctgtcagatgtcttaagatcaaaaaaattaagccacaact
cgttgtggcaagaatgtggagcaaagggcatactcctacattgctagcag
gaatatgaacttgtagaactactttgaagatcaatttggtggtttctcag
aaaattgtcaatagttctcacctcatgacccagatatgccatttctggga
atataaccaaaaaatgttccaccatttcacaaggacacttgctcaactat
atttttagcaaatttactaataagagccagaaaatgaaaacaatgtagat
gcccctcaactgaagaatgattaaagaaaaggtggcatatatacataata
gaatattgctcagctattaaatacaatgatattatgaaactttcaggcaa
atgtatggaataagaaaagatcatgctaagaatggtaacccaaaccagca
ctgggtcaccttgggtgcagagtcagcagacacctccaaggtccctagag
gactctccactcaatctaagaccaccagtgagtgaaacacaacttctgtt
ccattccaattgcacaggacatgagacagcattagggaaacagaaaaccc
tgcctgaccagggtcacaagtcccttctggtcggcaacagcaccaagtca
actgggcactgagtaagcagacacccccaaggtccctagaagacagcttc
tgaggcagaccccatttcaggctccagacatccaggcaacttccttgcca
gaggagaggtgttggccccagcctggagggctttgctggagcatctgggg
gagccatcttgggttcctagatctgtctgagactagtctgcacagtgaga
gtgtggactgcagaagctaacagcttctgggacagcagaagccacacagc
ttctgaggcagaccctgtttcagttcagacatctgggtactctctgcaga
ggagagtgttcagccctgcccgggcggtggggcgcttgcttgagcactgg
agagcatattgatccagatctcagactagctgctctagttgaagtggact
acgaagactaacagccttaatggaaccagggct
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chrX_60296476_60297528
seq2: B6Ng01-255J12.b_205_1243

seq1  GACAGGTTTCTTCACTAAGCCCAAAGAAATCAGGCAGAACTATAGAGCAT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GACAGGTTTCTTCACTAAGCCCAAAGAAATCAGGCAGAACTATAGAGCAT  50

seq1  AAATAAATTTTATGCCTCAGTCCAGCCTTTTTTTAAAAAAAAAATGTTAA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAATAAATTTTATGCCTCAGTCCAGCCTTTTTTTAAAAAAAAAATGTTAA  100

seq1  TAACTGGGAGTAGATGTAGCCTCCAACAAGCCTGAAGCAGGCCGAGCCAG  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAACTGGGAGTAGATGTAGCCTCCAACAAGCCTGAAGCAGGCCGAGCCAG  150

seq1  ACCTTGACTTTGTTGCCACTAAGGAGATAACTTAGGGTGGAGCCTGCCTC  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCTTGACTTTGTTGCCACTAAGGAGATAACTTAGGGTGGAGCCTGCCTC  200

seq1  CCTGGATCACTCTATTGTTCAGCCATTGCAGCTGCTGCTACCTGCTGTGA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTGGATCACTCTATTGTTCAGCCATTGCAGCTGCTGCTACCTGCTGTGA  250

seq1  TTTGGCCTAGCTAATCTGGAGACCACACATAGTCACCTGAAGCTGGGCTC  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTGGCCTAGCTAATCTGGAGACCACACATAGTCACCTGAAGCTGGGCTC  300

seq1  CAAGGATGATTTGGCGGGAATGGGCTTCCCCTCTCCTTTATAAAGCATGT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAGGATGATTTGGCGGGAATGGGCTTCCCCTCTCCTTTATAAAGCATGT  350

seq1  CTGCCATTAAAAATTTGAGCCTTGATCAGAATACTGTTTTGGTTCCATCT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGCCATTAAAAATTTGAGCCTTGATCAGAATACTGTTTTGGTTCCATCT  400

seq1  CTCTCTCTCTCTTGTCTGCCTAGTTTCCTTTTCTTTCAGCTCCAAGATGC  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCTCTCTCTCTTGTCTGCCTAGTTTCCTTTTCTTTCAGCTCCAAGATGC  450

seq1  TTCCCAGGCTCGAACCTGGACATGAGAGCTGCAGGCTGGCCCCAACATGA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCCCAGGCTCGAACCTGGACATGAGAGCTGCAGGCTGGCCCCAACATGA  500

seq1  GTTGTGTTTCTATTGATATAAATGTTGGTTTTATTTCCTCAAATGAAAGG  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTGTGTTTCTATTGATATAAATGTTGGTTTTATTTCCTCAAATGAAAGG  550

seq1  ATGAGAGAAGAACTGTACACAAGATTCAAATTGACCTCTCTCACCTTCTG  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGAGAGAAGAACTGTACACAAGATTCAAATTGACCTCTCTCACCTTCTG  600

seq1  ATTATTTTTATTATTTATTTCACCACATGTTCATTTATTTAACCATTTGT  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTATTTTTATTATTTATTTCACCACATGTTCATTTATTTAACCATTTGT  650

seq1  GTTGTCTGTTTTTGTCAACATGAATTGCTCTGCTTGGAGAACCTGCCTGT  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTGTCTGTTTTTGTCAACATGAATTGCTCTGCTTGGAGAACCTGCCTGT  700

seq1  GGACTTCATAAACTGAATTGCACTGCATTGAGTGAATGAACAGAATGGAA  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGACTTCATAAACTGAATTGCACTGCATTGAGTGAATGAACAGAATGGAA  750

seq1  CCAAATGGAACTGCATGAACTCAACTGAACTCAACTGCACTCAACTGCAC  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCAAATGGAACTGCATGAACTCAACTGAACTCAACTGCACTCAACTGCAC  800

seq1  TCAACTGAACTCAACATAACTTCACCTTTCTTGCTGCACTTTTTAGTAGC  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCAACTGAACTCAACATAACTTCACCTTTCTTGCTGCACTTTTTAGTAGC  850

seq1  CTCTTTCCTGTCTGTTCTTATTAGTGATGGTGTTCCCTACCATTGACTCA  900
      |||||||||||||||||||||||||||||||| |||||||   |||||||
seq2  CTCTTTCCTGTCTGTTCTTATTAGTGATGGTG-TCCCTAC--ATGACTCA  897

seq1  TTCCCTCAAATCTATCTTTAATTGACCATCAGATTAGCCTCTAGGCAAGC  950
      ||||||||||||||||||||| ||| ||||||||||| ||||||||||||
seq2  TTCCCTCAAATCTATCTTTAA-TGA-CATCAGATTAG-CTCTAGGCAAGC  944

seq1  CTATTGGTTGTTTTCTTGATAATGTAGGAGGATCAAGGATATTGGTGAG-  999
       |||||||||||||| ||||||  |  || |||| | |||||||||||| 
seq2  TTATTGGTTGTTTTC-TGATAAATTTAGA-GATCCA-GATATTGGTGAGA  991

seq1  ATGGCCTGTGTTGTGGAAAACAGGAACAGAGTGAGTTGTGCAGAGCATGT  1049
      |  ||||||||||||||||    ||||  |||||  ||||   |||||||
seq2  AATGCCTGTGTTGTGGAAA--CTGAAC--AGTGA--TGTGGCAAGCATGT  1035

seq1  CAGT  1053
      ||||
seq2  CAGT  1039


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