BAC Information

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BAC

Clone NameB6Ng01-256J01
ChromosomeX (Build37)
Map Location 61,962,592 - 61,963,156
singlet/doubletsinglet
Overlap genenone
Upstream geneLOC666729, EG627470, 3830417A13Rik, Slitrk4
Downstream geneLOC100040011, Ctag2
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-256J01.bB6Ng01-256J01.g
ACCGA062491GA062492
length7661,159
definitionB6Ng01-256J01.b B6Ng01-256J01.g
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattctcaacaaaggaatctctaatgaccgagacacacttcaagaacaa
aattaggaatagttctaactcaagatccagctatatccctcccagtttat
accctaaagattctccactgtactacagtgggtcttccttcactatgctt
aaagcagctttatttgtcatagccagaacctgaaaacaacctagctgtcc
cttacctgaagaatggataaagaggatgtggttctacacaatagaatact
attcagctattaaaatcatgaatttgcaggcaaatggaggaaacttgaga
atagcatcctgagtgaggtaacccagacccaaaaggacaggcatggtatg
tattcttctataagtggatatgagccataaaatataggatacccatgtta
tactacacagccccaaataaagctaattaagaaggaatacacaagtgaaa
atgtttgaatctcacgtaaaagtaggaaataaaatagtcctagaagtcag
agaggtggaggacactaggagggagagaggatggggaggacaatgagaat
gggatttcaggataaagtatggggagagacaggaaagacagtcagatggc
catgaatatgaatagaaatctgcaaatggtaggggtcaggaagttagcag
tcatctcaaggacttgccagatatgtgggataggggatgcacctgagagt
caatgggggtgatactagccgagactcacagtagtggggatgttgaaccc
actagtagggatattg

gaattctcacctgaggaataccgaatggcagagaagcacctgaaaaaatg
ttcaacatccttaatcatcagggaaatgcaaatcaaaacaaccctgagat
tccacctcacaccagtgagaatggctaagatcaaaaattcaggtgacagc
agatgctggcgaggatgtggagaaagaggaacactcctccattgttggtg
ggattgcaggcttgtacaaccactctggaaatcagtctggcggttcctca
gaaaattggacatagtactaccggaggatccagcaatacctctcctgggc
atatatccagaagaagccccaactggtaagaaggacacatgctccactat
gttcatagcagccttatttataatagccagaaactggaaagaacccagat
gcccctcaacagaggaatggatacagaaaatgtggtacatctacacaatg
gagtactactcagctattaaaaagaatgaatttatgaaattcctagccaa
atggatggacctggagagcatcatcctgagtgaggtaacacaatcacaaa
ggaactcacacaatatgtactcactgataagtggatactagcccaaaacc
taggatacccacgatataagatacaatttcctaaacacatgaaactcaag
aaaaatgaagactgaagtgtggacactatgcccctccttagaagtgggaa
caaaacacccatggaaggagttacagaaacaaagtatggagctgagatga
aaggatggaccatgtagagactgccatatccagggatccaccccataatc
agcttccaaatgctgacaccattgcatacactagcaagattttactgaaa
ggacccagatgtagctgtctcttgtgagactatgcccgggcctagcaaac
acagaagtggatgctcacagtcagctaatggatggatcacagggctccaa
tggaggagctagagaagtaccaagagctaaagggattctcaccctatagt
ggacacatatgactaacagtacccctgagctctgactctagctgcatatg
tatccaaagatgacttagtcggcccatcacttgaaagagaggccaatgaa
ccgctgaactgagtgccaggttacggaacgctcaggcctaatggggggga
gatacgtgt
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chrX_61962592_61963156
seq2: B6Ng01-256J01.b_44_608

seq1  GAATTCTCAACAAAGGAATCTCTAATGACCGAGACACACTTCAAGAACAA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTCAACAAAGGAATCTCTAATGACCGAGACACACTTCAAGAACAA  50

seq1  AATTAGGAATAGTTCTAACTCAAGATCCAGCTATATCCCTCCCAGTTTAT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATTAGGAATAGTTCTAACTCAAGATCCAGCTATATCCCTCCCAGTTTAT  100

seq1  ACCCTAAAGATTCTCCACTGTACTACAGTGGGTCTTCCTTCACTATGCTT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCCTAAAGATTCTCCACTGTACTACAGTGGGTCTTCCTTCACTATGCTT  150

seq1  AAAGCAGCTTTATTTGTCATAGCCAGAACCTGAAAACAACCTAGCTGTCC  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAGCAGCTTTATTTGTCATAGCCAGAACCTGAAAACAACCTAGCTGTCC  200

seq1  CTTACCTGAAGAATGGATAAAGAGGATGTGGTTCTACACAATAGAATACT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTACCTGAAGAATGGATAAAGAGGATGTGGTTCTACACAATAGAATACT  250

seq1  ATTCAGCTATTAAAATCATGAATTTGCAGGCAAATGGAGGAAACTTGAGA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTCAGCTATTAAAATCATGAATTTGCAGGCAAATGGAGGAAACTTGAGA  300

seq1  ATAGCATCCTGAGTGAGGTAACCCAGACCCAAAAGGACAGGCATGGTATG  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATAGCATCCTGAGTGAGGTAACCCAGACCCAAAAGGACAGGCATGGTATG  350

seq1  TATTCTTCTATAAGTGGATATGAGCCATAAAATATAGGATACCCATGTTA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATTCTTCTATAAGTGGATATGAGCCATAAAATATAGGATACCCATGTTA  400

seq1  TACTACACAGCCCCAAATAAAGCTAATTAAGAAGGAATACACAAGTGAAA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACTACACAGCCCCAAATAAAGCTAATTAAGAAGGAATACACAAGTGAAA  450

seq1  ATGTTTGAATCTCACGTAAAAGTAGGAAATAAAATAGTCCTAGAAGTCAG  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGTTTGAATCTCACGTAAAAGTAGGAAATAAAATAGTCCTAGAAGTCAG  500

seq1  AGAGGTGGAGGACACTAGGAGGGAGAGAGGATGGGGAGGACAATGAGAAT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAGGTGGAGGACACTAGGAGGGAGAGAGGATGGGGAGGACAATGAGAAT  550

seq1  GGGATTTCAGGATAA  565
      |||||||||||||||
seq2  GGGATTTCAGGATAA  565


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