BAC Information

Click to search

BAC

Clone NameB6Ng01-257L14
ChromosomeX (Build37)
Map Location 63,953,181 - 63,954,226
singlet/doubletsinglet
Overlap genenone
Upstream geneLOC671840, Slitrk2
Downstream geneLOC666824, LOC627734, EG666828, Gm1140, LOC666842
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-257L14.bB6Ng01-257L14.g
ACCGA063347GA063348
length1,103733
definitionB6Ng01-257L14.b B6Ng01-257L14.g
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattcacgcctagtcactgcccatctcggggcgtagtaatggggtgatg
ggcgagtaaagaatcaggagctgtcacgccacatcaggtgctgaaacgtc
acgctgcaggctatataagcagcgccattttctgggttcggggccgtctt
cctcctgagaagtaagcaataaagccttttgccgcagaagattccggttg
tcctgagtgtgttcttgccttcggggacaaaagctccggatagtggttga
aagttctgttctaagatcctgagaagttagctgcatttctagtatcagat
gtggttttccttttgttgagcaacttataaaggcctattatagacctgtt
tgttacctccatggtatgtatcccaccactgcacacttggggttatggtc
ctttgatgcttcttgcagtttataggtatcactgagtaagagtatgggtt
gttcccctctcaaagcttacatagcaccttctgaaatgggccaaattttt
acatttccactatccaaagtttgagaatggtggtgattatttggctggtg
aatgacacttttgctgaagacccgtaagagttttttcttttttttttttt
ttaattttttatttgaaataaattttcttcacacaatatattccagttat
ggcttctctttcctggactcctaccaggttcaacctcccagcctccctat
gtacatccattctcattcttgctcatttgaaaacaagtggacatgtaaaa
ataataataataaaataaaaacaagcaatccctaataggacgaaacaaac
aaaaagaaacaaacaaacaaacaaaaagccaaagtaaaagcataagaaac
acatatagatacagagatatatacattcacacacaaagaaatcccataat
agcacacaaacggaaactgtaatgtataaacaaaatattttacaagatta
agaaataaataaaaacaagcaaacacacaagaactccaaaagaccatcaa
gtttgttttgtgatgatcatctactgctaggcacaggtctgctattgaag
atggtttgtatactagtgagaactctactgcaaaactattctttcctcta
tga

gaattcatgaagttcttaggcaaatgattggatgtagaaaatatcctgag
tgaggtgactcagtcacaaaggaacaaacatggtatgtattcattgataa
atggatattagtccaaaagtttagaatacccatgattcaattcacagacc
atataaagcctaagtagaaggaagactaaattgtggatgcttcagtgctt
tttagatcggtggacaaaatactcaatggaggaagtatggagactaagtg
tggagcagagactgaggaaaggacatcccgagactgcccaacccggggat
ccatcccatatacagccaccaaaccagtacattattgtggattccaggaa
gtgcttgctgacaggagcctgatatggctgtctcctgagaggctctgtta
gagcctgacaaacacagagtagaaagcttgcagccaaccattggactgag
ctcgagtgtcccagattgaggagatggagaagggactgaaggagctgagt
ggatttgcagccccatggagggatcaacagtgtcaacaggccagaccctc
cagagttcccaggaactggaccaccaaccaaagaacgcacatggagcaac
ccagtgtgctggccacatacgtggcagaacgtgacctcgttggacatcag
tgggaggagaggcctgagggcctgacggtgttcaatgccagagcaggagg
atgggagtgggtttgtggaggagcatcttcatt
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chrX_63953181_63954226
seq2: B6Ng01-257L14.b_104_1146 (reverse)

seq1  TCATAGAGGAAAG-ATAGTTTTTGCCAGTAGAG-TCTCACTAGGTATACA  48
      ||||||||||||| ||||||||   |||||||| |||||||| |||||||
seq2  TCATAGAGGAAAGAATAGTTTT--GCAGTAGAGTTCTCACTA-GTATACA  47

seq1  AACCATCCTTCAATAGCAGGCCCTGTGCCTAGCAGTAGATGATCATCACA  98
      |||||| ||||||||||| | |||||||||||||||||||||||||||||
seq2  AACCAT-CTTCAATAGCA-GACCTGTGCCTAGCAGTAGATGATCATCACA  95

seq1  AAACAAACTTGATGGTCTTTTTGGAGTTCTTGTGTGTTTGCTTGTTTTTA  148
      ||||||||||||||||| ||||||||||||||||||||||||||||||||
seq2  AAACAAACTTGATGGTC-TTTTGGAGTTCTTGTGTGTTTGCTTGTTTTTA  144

seq1  TTTATTTCTTAATCTTGT-AAATATTTTGTTTATACATTACAGTTTCCGT  197
      |||||||||||||||||| |||||||||||||||||||||||||||||||
seq2  TTTATTTCTTAATCTTGTAAAATATTTTGTTTATACATTACAGTTTCCGT  194

seq1  TTGTGTGCTATTATGGGATTTCTTTGTGTGTGAATGTATATATCTCTGTA  247
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGTGTGCTATTATGGGATTTCTTTGTGTGTGAATGTATATATCTCTGTA  244

seq1  TCTATATGTGTTTCTTATGCTTTTACTTTGGCTTTTTGTTTGTTTGTTTG  297
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTATATGTGTTTCTTATGCTTTTACTTTGGCTTTTTGTTTGTTTGTTTG  294

seq1  TTTCTTTTTGTTTGTTTCGTCCTATTAGGGATTGCTTGTTTTTATTTTAT  347
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTCTTTTTGTTTGTTTCGTCCTATTAGGGATTGCTTGTTTTTATTTTAT  344

seq1  TATTATTATTTTTACATGTCCACTTGTTTTCAAATGAGCAAGAATGAGAA  397
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATTATTATTTTTACATGTCCACTTGTTTTCAAATGAGCAAGAATGAGAA  394

seq1  TGGATGTACATAGGGAGGCTGGGAGGTTGAACCTGGTAGGAGTCCAGGAA  447
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGATGTACATAGGGAGGCTGGGAGGTTGAACCTGGTAGGAGTCCAGGAA  444

seq1  AGAGAAGCCATAACTGGAATATATTGTGTGAAGAAAATTTATTTCAAATA  497
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAGAAGCCATAACTGGAATATATTGTGTGAAGAAAATTTATTTCAAATA  494

seq1  AAAAATTAAAAAAAAAAAAAAAGAAAAAACTCTTACGGGTCTTCAGCAAA  547
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAAATTAAAAAAAAAAAAAAAGAAAAAACTCTTACGGGTCTTCAGCAAA  544

seq1  AGTGTCATTCACCAGCCAAATAATCACCACCATTCTCAAACTTTGGATAG  597
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTGTCATTCACCAGCCAAATAATCACCACCATTCTCAAACTTTGGATAG  594

seq1  TGGAAATGTAAAAATTTGGCCCATTTCAGAAGGTGCTATGTAAGCTTTGA  647
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGAAATGTAAAAATTTGGCCCATTTCAGAAGGTGCTATGTAAGCTTTGA  644

seq1  GAGGGGAACAACCCATACTCTTACTCAGTGATACCTATAAACTGCAAGAA  697
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGGGGAACAACCCATACTCTTACTCAGTGATACCTATAAACTGCAAGAA  694

seq1  GCATCAAAGGACCATAACCCCAAGTGTGCAGTGGTGGGATACATACCATG  747
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCATCAAAGGACCATAACCCCAAGTGTGCAGTGGTGGGATACATACCATG  744

seq1  GAGGTAACAAACAGGTCTATAATAGGCCTTTATAAGTTGCTCAACAAAAG  797
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGGTAACAAACAGGTCTATAATAGGCCTTTATAAGTTGCTCAACAAAAG  794

seq1  GAAAACCACATCTGATACTAGAAATGCAGCTAACTTCTCAGGATCTTAGA  847
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAAACCACATCTGATACTAGAAATGCAGCTAACTTCTCAGGATCTTAGA  844

seq1  ACAGAACTTTCAACCACTATCCGGAGCTTTTGTCCCCGAAGGCAAGAACA  897
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAGAACTTTCAACCACTATCCGGAGCTTTTGTCCCCGAAGGCAAGAACA  894

seq1  CACTCAGGACAACCGGAATCTTCTGCGGCAAAAGGCTTTATTGCTTACTT  947
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACTCAGGACAACCGGAATCTTCTGCGGCAAAAGGCTTTATTGCTTACTT  944

seq1  CTCAGGAGGAAGACGGCCCCGAACCCAGAAAATGGCGCTGCTTATATAGC  997
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCAGGAGGAAGACGGCCCCGAACCCAGAAAATGGCGCTGCTTATATAGC  994

seq1  CTGCAGCGTGACGTTTCAGCACCTGATGTGGCGTGACAGCTCCTGATTC  1046
      |||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGCAGCGTGACGTTTCAGCACCTGATGTGGCGTGACAGCTCCTGATTC  1043


| Home | SequenceCutter | Blast | Download |