BAC Information

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BAC

Clone NameB6Ng01-257P17
ChromosomeX (Build37)
Map Location 43,142,857 - 43,143,851
singlet/doubletsinglet
Overlap genenone
Upstream geneWdr40b, LOC665585, 1110059M19Rik, LOC100040038, EG385346
Downstream geneLOC100040075, Actrt1, EG245405, LOC665632
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-257P17.bB6Ng01-257P17.g
ACCGA063540GA063541
length9941,191
definitionB6Ng01-257P17.b B6Ng01-257P17.g
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattctgtaatttcttccagctctagagcacagtggttatctctaccca
tttttctacaataaagaaactatgagctgctcatttaaaaatatctgtca
ccacaatgttaatgtctttggttcatgtgttttgtagaagatcaaatatt
aattttaggagaaattataaaataaagaataaagaaaatataaaataaag
aatacacacacacacacacacacacacacatatatatatatatatatata
tatatatatatatataccctcatgcacaaagaagtaactgtaaactgaaa
aacaaggtgaacttacaaatgcaaactgtgaataagtaaataaatacaaa
tcagtatatgattagaaaaattgcatatattcaaaaatagataaaatgag
gtacacatcaatctactcattgattatcctgttgataacatgttatttta
acagtttctgctctggaaaattcacttaaataaaatagtttaaatgaata
aataatctcatttagtaattacatatgaattaaaattttttattaccaaa
tactacaccaaacaataaaagttttggagctatttaattcattttatgtt
tatagtagcagtcaaagaaatatgatcacaattaaattccataatatatt
ttgttttatatttcttctctatgatgtcgaactttaaacatgtctacatt
gtacttgatacaacttgagcgtcatcgtcattatcatcaataacttcaaa
ttcacccataatacaataggtagatgtgcaacttctttctaagaaaaaac
atatctttcttattagttgtggacatagaaattacatataaataatgaga
agaattttaattcatcaacatggctgctctgggcaagggataatatccaa
aagtatgaagaggctgaaatacagacatgtcgttgattacagtatgatca
cagtagtgagtgtggtgaataggagtgtgtatatgttgtgttat
gaattcaataactcacttagagagatacaggagaacactgctaaagagtt
acaagtccttaaagaaaaacaggaaaacactgctaaagagttacaagtcc
ttaaagaaaaacaggaaaacacaaccaaacaggtagaagtccttatagaa
aaacaggaaaacacatccaaacaggtgatggaaatgaacaaaaccatact
agacctaaaaagggaaatagacacaataaagaaaacccaaagtgaggcaa
cgctggagatagaaaccctaggaaagaaatctggaaccatagatgccagc
atcagcaacagaatacaagagatggaagagagaatctcaggtgcagaaga
ctccatagagaacatcagcacaacaatcaaagaaaatggaaaatgcaaaa
cgatcctaactaaaaacatccaggaaatccaggacacaatgagaagacca
aacctatggataataggagtggatgagaatgaagattttcaaccccaagg
accagcaatcatcttcaacaaaattattgaggaaaacttcccaaatctaa
agaaagagatgcccatgaacatacaagaagcctacagaactccaaataga
ctggaccagaaaagaaattcctcccgacacataataatcagaacatcaaa
tgcactaaataaagatagaatactaaaagcagtaagggaaaaaggtcaag
taacatataaaggcaagcctatcagaattacaccagatttttcaccagag
actatgaaagccagaagagcctggacagatgttatacagacactaagaga
acacaaatgccagcccaggctactatacccagccaaactctcaattacca
tagatggagaaaccaaagtattccacgacaaaactaaattcacccattat
ctctccacgaatccagcccttcaaaggataataacagaaaaaaccaatac
aaggacaggaaccacgccctagaaaaacaagagataatccctcacaacct
aaagagaagagcacaagaacagaatgccactttaacaagaaaaaataaca
ggaagctacaatttactttctttaatatctcctaatatcaatgtactcat
ccataaggacgtagactaacgactggctaccgacaggaacctacattctg
ctgctttacaggtaaacccaatctctcttcagaggtcatag
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chrX_43142857_43143851
seq2: B6Ng01-257P17.b_46_1039 (reverse)

seq1  ATAACAC-ACATATACACACTCCTATTCACCACACTCACTACTGTGATCA  49
      ||||||| ||||||||||||||||||||||||||||||||||||||||||
seq2  ATAACACAACATATACACACTCCTATTCACCACACTCACTACTGTGATCA  50

seq1  TACTGTAATCAACGACATGTCTGTATTTCAGCCTCTTCATACTTTTGGAT  99
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACTGTAATCAACGACATGTCTGTATTTCAGCCTCTTCATACTTTTGGAT  100

seq1  ATTATCCCTTG-CCAGAGCAGCCATGTTGATGAATTAAAATTCTTCTCAT  148
      ||||||||||| ||||||||||||||||||||||||||||||||||||||
seq2  ATTATCCCTTGCCCAGAGCAGCCATGTTGATGAATTAAAATTCTTCTCAT  150

seq1  TATTTATATGTAATTTCTATGTCCACAACTAATTAAGAAAGATATGTTTT  198
      |||||||||||||||||||||||||||||||| |||||||||||||||||
seq2  TATTTATATGTAATTTCTATGTCCACAACTAA-TAAGAAAGATATGTTTT  199

seq1  TTCTTAGAAAGAAGTTGCACATCTACCTATTGTATTATGGGTGAATTTGA  248
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCTTAGAAAGAAGTTGCACATCTACCTATTGTATTATGGGTGAATTTGA  249

seq1  AGTTATTGATGATAATGACGATGACGCTCAAGTTGTATCAAGTACAATGT  298
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTTATTGATGATAATGACGATGACGCTCAAGTTGTATCAAGTACAATGT  299

seq1  AGACATGTTTAAAGTTCGACATCATAGAGAAGAAATATAAAACAAAATAT  348
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGACATGTTTAAAGTTCGACATCATAGAGAAGAAATATAAAACAAAATAT  349

seq1  ATTATGGAATTTAATTGTGATCATATTTCTTTGACTGCTACTATAAACAT  398
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTATGGAATTTAATTGTGATCATATTTCTTTGACTGCTACTATAAACAT  399

seq1  AAAATGAATTAAATAGCTCCAAAACTTTTATTGTTTGGTGTAGTATTTGG  448
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAATGAATTAAATAGCTCCAAAACTTTTATTGTTTGGTGTAGTATTTGG  449

seq1  TAATAAAAAATTTTAATTCATATGTAATTACTAAATGAGATTATTTATTC  498
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAATAAAAAATTTTAATTCATATGTAATTACTAAATGAGATTATTTATTC  499

seq1  ATTTAAACTATTTTATTTAAGTGAATTTTCCAGAGCAGAAACTGTTAAAA  548
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTTAAACTATTTTATTTAAGTGAATTTTCCAGAGCAGAAACTGTTAAAA  549

seq1  TAACATGTTATCAACAGGATAATCAATGAGTAGATTGATGTGTACCTCAT  598
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAACATGTTATCAACAGGATAATCAATGAGTAGATTGATGTGTACCTCAT  599

seq1  TTTATCTATTTTTGAATATATGCAATTTTTCTAATCATATACTGATTTGT  648
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTATCTATTTTTGAATATATGCAATTTTTCTAATCATATACTGATTTGT  649

seq1  ATTTATTTACTTATTCACAGTTTGCATTTGTAAGTTCACCTTGTTTTTCA  698
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTTATTTACTTATTCACAGTTTGCATTTGTAAGTTCACCTTGTTTTTCA  699

seq1  GTTTACAGTTACTTCTTTGTGCATGAGGGTATATATATATATATATATAT  748
      |||||||||||||||||||||||||||||  |||||||||||||||||||
seq2  GTTTACAGTTACTTCTTTGTGCATGAGGG--TATATATATATATATATAT  747

seq1  ATATATATATATATATATATGTGTGTGTGTGTGTGTGTGTGTGTATTCTT  798
      |||||||||||||||||| |||||||||||||||||||||||||||||||
seq2  ATATATATATATATATATGTGTGTGTGTGTGTGTGTGTGTGTGTATTCTT  797

seq1  TATTTTATATTTTCTTTATTCTTTATTTTATAATTTCTCCTAAAATTAAT  848
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATTTTATATTTTCTTTATTCTTTATTTTATAATTTCTCCTAAAATTAAT  847

seq1  ATTTGATCTTCTACAAAACACATGAACCAAAGACATTAACATTGTGGTGA  898
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTTGATCTTCTACAAAACACATGAACCAAAGACATTAACATTGTGGTGA  897

seq1  CAGATATTTTTAAATGAGCAGCTCATAGTTTCTTTATTGTAGAAAAATGG  948
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGATATTTTTAAATGAGCAGCTCATAGTTTCTTTATTGTAGAAAAATGG  947

seq1  GTAGAGATAACCACTGTGCTCTAGAGCTGGAAGAAATTACAGAATTC  995
      |||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTAGAGATAACCACTGTGCTCTAGAGCTGGAAGAAATTACAGAATTC  994