BAC Information

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BAC

Clone NameB6Ng01-258N08
ChromosomeX (Build37)
Map Location 65,004,782 - 65,005,943
singlet/doubletsinglet
Overlap genenone
Upstream geneLOC666824, LOC627734, EG666828, Gm1140, LOC666842
Downstream geneLOC619873, 4933436I01Rik, LOC100040194, EG236844, LOC385372, LOC627888, LOC434788, Fmr1
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-258N08.bB6Ng01-258N08.g
ACCGA064170GA064171
length1,165492
definitionB6Ng01-258N08.b B6Ng01-258N08.g
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattctctatataagatgttgaactataataaaaaatcagttctgtctc
ttttgattttcagattctaaaaatatcttacccacactacatcactaatc
atcataacatatttatgtataagatacagcagcatgaatttgtcctaagg
gtcatatgatatcaactatcagaactatccaaaggcacatgtggataaga
caccagttatgatataaaactacttattttcataacaaaggtattgataa
ttatactagtgcacagtatgtgggtctccctttcttcaggagtcattggt
cacctgcccatgaggacagaggcagcagaagcagctagcacaggctggaa
agtcatggctattttagaaggacttctggagagacagctttagtgagaca
gctctactttactgtttcaggggtgagtatataagggctcttagggttaa
ggggaagggctcattggtcataacacaatacctaattatcatacagcatg
aagggcttagcaggtcttatgtgctgaatcatgaagtgcttgcaggaagc
tcagtgtagtgtcatcctccagatatgatcaggtacctgtgcttagagac
actctacaaataatgtcagtggagaaggtgaagccctgctgagaaaggga
gtcctccattttgcctgagctcagagaggtatatggacatggtggactgt
taccacaatagcagtgctttacaaaaacaataaactaattctactacatc
aataattaaaattaatacattaataattgtatttactaggtcaaatatct
aaaatatgtacagacaaaatgacttgtgccttatttttctcattttctat
ggataatctatattgggttctgcaaagtcagcactgtcaaccagagttgc
ttcaatgttgttcaaatagaaaatcatcaacacccaaaaagcttagcttc
tagcttaaatgataggctttatcgaattcctagaccatgggacgaaacga
aaaaaacaggagacatgaaaaaaaaaagcattggaaatttacacattatg
gtgtttaataaaggagacagaggatgctaatacgtttaaggttgatggat
ctacaaacacaggatgggtaatagaggcatcaggatctcttaacatttat
gttcaaggatagtct

gaattccatcaaaagcttgatttttgggtctgtttccttggaaaaatctt
ttgtcagccctttagtctgagtcaaagtcaatcttggtttcagaggcttg
cattttgtgtacagcagaatgatagatcctgtttttgcatctactctgtt
agcctgtctttttattggaagattgtgcccatttgtgaggagctgccctt
gcaattaccattacaagatggcgctgacatccggtgttctaactggtaaa
caagtagtctgcacatgtgctggggtattttttcattccttgtgccctgc
ctgtccggtggcatcatctgggatgatggtgagcaaccagtcagggtgaa
atacgtctccaacagctcttgtggtctatttaaggaccgagtttcctgtg
ttctgggtctcctccccagaagctgatcatctttctctcgagatgcatta
aagctttgctgcagaaggatccgaatgtgtcctgtgtgtgtg
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chrX_65004782_65005943
seq2: B6Ng01-258N08.b_50_1214

seq1  GAATTCTCTATATAAGATGTTGAACTATAATAAAAAATCAGTTCTGTCTC  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTCTATATAAGATGTTGAACTATAATAAAAAATCAGTTCTGTCTC  50

seq1  TTTTGATTTTCAGATTCTAAAAATATCTTACCCACACTACATCACTAATC  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTGATTTTCAGATTCTAAAAATATCTTACCCACACTACATCACTAATC  100

seq1  ATCATAACATATTTATGTATAAGATACAGCAGCATGAATTTGTCCTAAGG  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCATAACATATTTATGTATAAGATACAGCAGCATGAATTTGTCCTAAGG  150

seq1  GTCATATGATATCAACTATCAGAACTATCCAAAGGCACATGTGGATAAGA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTCATATGATATCAACTATCAGAACTATCCAAAGGCACATGTGGATAAGA  200

seq1  CACCAGTTATGATATAAAACTACTTATTTTCATAACAAAGGTATTGATAA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACCAGTTATGATATAAAACTACTTATTTTCATAACAAAGGTATTGATAA  250

seq1  TTATACTAGTGCACAGTATGTGGGTCTCCCTTTCTTCAGGAGTCATTGGT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTATACTAGTGCACAGTATGTGGGTCTCCCTTTCTTCAGGAGTCATTGGT  300

seq1  CACCTGCCCATGAGGACAGAGGCAGCAGAAGCAGCTAGCACAGGCTGGAA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACCTGCCCATGAGGACAGAGGCAGCAGAAGCAGCTAGCACAGGCTGGAA  350

seq1  AGTCATGGCTATTTTAGAAGGACTTCTGGAGAGACAGCTTTAGTGAGACA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTCATGGCTATTTTAGAAGGACTTCTGGAGAGACAGCTTTAGTGAGACA  400

seq1  GCTCTACTTTACTGTTTCAGGGGTGAGTATATAAGGGCTCTTAGGGTTAA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTCTACTTTACTGTTTCAGGGGTGAGTATATAAGGGCTCTTAGGGTTAA  450

seq1  GGGGAAGGGCTCATTGGTCATAACACAATACCTAATTATCATACAGCATG  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGGAAGGGCTCATTGGTCATAACACAATACCTAATTATCATACAGCATG  500

seq1  AAGGGCTTAGCAGGTCTTATGTGCTGAATCATGAAGTGCTTGCAGGAAGC  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGGGCTTAGCAGGTCTTATGTGCTGAATCATGAAGTGCTTGCAGGAAGC  550

seq1  TCAGTGTAGTGTCATCCTCCAGATATGATCAGGTACCTGTGCTTAGAGAC  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCAGTGTAGTGTCATCCTCCAGATATGATCAGGTACCTGTGCTTAGAGAC  600

seq1  ACTCTACAAATAATGTCAGTGGAGAAGGTGAAGCCCTGCTGAGAAAGGGA  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTCTACAAATAATGTCAGTGGAGAAGGTGAAGCCCTGCTGAGAAAGGGA  650

seq1  GTCCTCCATTTTGCCTGAGCTCAGAGAGGTATATGGACATGGTGGACTGT  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTCCTCCATTTTGCCTGAGCTCAGAGAGGTATATGGACATGGTGGACTGT  700

seq1  TACCACAATAGCAGTGCTTTACAAAAACAATAAACTAATTCTACTACATC  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACCACAATAGCAGTGCTTTACAAAAACAATAAACTAATTCTACTACATC  750

seq1  AATAATTAAAATTAATACATTAATAATTGTATTTACTAGGTCAAATATCT  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATAATTAAAATTAATACATTAATAATTGTATTTACTAGGTCAAATATCT  800

seq1  AAAATATGTACAGACAAAATGACTTGTGCCTTATTTTTCTCATTTTCTAT  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAATATGTACAGACAAAATGACTTGTGCCTTATTTTTCTCATTTTCTAT  850

seq1  GGATAATCTATATT-GGTTCTGCAAAGTCAGCACTGTCAACCAGAGTTGC  899
      |||||||||||||| |||||||||||||||||||||||||||||||||||
seq2  GGATAATCTATATTGGGTTCTGCAAAGTCAGCACTGTCAACCAGAGTTGC  900

seq1  TTCAATGTTGTTCAAATAGAAAATCATCAACACCCAAAAAGCTTAGCTTC  949
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCAATGTTGTTCAAATAGAAAATCATCAACACCCAAAAAGCTTAGCTTC  950

seq1  TAGCTTAAATGATAGGCTTTATCGAATTCCTAGACCAT-GGACGAAACG-  997
      |||||||||||||||||||||||||||||||||||||| |||||||||| 
seq2  TAGCTTAAATGATAGGCTTTATCGAATTCCTAGACCATGGGACGAAACGA  1000

seq1  AAAAAACA-GAGACATG-AAAAAAAAAGCATTGAAAATTTAACACATTAT  1045
      |||||||| |||||||| ||||||||||||||| |||||| |||||||||
seq2  AAAAAACAGGAGACATGAAAAAAAAAAGCATTGGAAATTT-ACACATTAT  1049

seq1  -GTGTTT-ATAAA-GAGACAGAGGAATGCTAATACGTTTAA-GTTGATGG  1091
       |||||| ||||| |||||||||| |||||||||||||||| ||||||||
seq2  GGTGTTTAATAAAGGAGACAGAGG-ATGCTAATACGTTTAAGGTTGATGG  1098

seq1  ATCTACAAAACAACAGGAT-GGTAATAGAGCATTCAGGAATCTCTTTTAC  1140
      |||||||||   ||||||| ||||||||||   ||||| ||||| || ||
seq2  ATCTACAAA--CACAGGATGGGTAATAGAGGCATCAGG-ATCTC-TTAAC  1144

seq1  ATTTTATGTCATAGAATAGTCT  1162
      | |||||||   || |||||||
seq2  A-TTTATGTTCAAGGATAGTCT  1165


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