MoG+ -Mouse Genome database with high added value-

BAC Information

BAC name
Region	Chromosome -
Gene	search by nearby gene name.
Format	rows / page	Page	1

BAC

Clone Name	B6Ng01-259H13
Chromosome	X (Build37)
Map Location	19,106,819 - 19,279,781
singlet/doublet	doublet
Overlap gene	none
Upstream gene	LOC100043098, EG628855, LOC385333, EG628871, LOC100043953, BC049702
Downstream gene	LOC675558, LOC668995, LOC385336, Chst7, Slc9a7, LOC668277, LOC100043954, EG668996, Rp2h, LOC668283, Phf16, Rgn, Ndufb11, Rbm10, Ube1x, Pctk1
Link	Open Mouse BAC browser

Click to get alignment info.

name	LOC100043098 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:100043098
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 2 mRNAs, 3 ESTs, 1 Protein

name	EG628855 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:628855 MGI:3647357
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 4 Proteins

name	LOC385333 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:385333
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 7 Proteins pseudo : _no_value

name	EG628871 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:628871 MGI:3645666
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 5 Proteins pseudo : _no_value

name	LOC100043953 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:100043953
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 5 Proteins pseudo : _no_value

name	BC049702 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:278255 MGI:3037654
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	LOC675558 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:675558
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 2 Proteins pseudo : _no_value

name	LOC668995 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:668995
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 7 ESTs, 5 Proteins pseudo : _no_value

name	LOC385336 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:385336
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 10 mRNAs, 667 ESTs, 8 Proteins pseudo : _no_value

name	Chst7 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:60322 MGI:1891767
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Slc9a7 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:236727 MGI:2444530
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	LOC668277 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:668277
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 146 ESTs, 6 Proteins pseudo : _no_value

name	LOC100043954 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:100043954
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 22 Proteins pseudo : _no_value

name	EG668996 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:668996 MGI:3643654
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 5 Proteins

name	Rp2h (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:19889 MGI:1277953
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	LOC668283 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:668283
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 mRNA, 2 ESTs pseudo : _no_value

name	Phf16 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:382207 MGI:2148019
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Rgn (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:19733 MGI:108024
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Ndufb11 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:104130 MGI:1349919
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Rbm10 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:236732 MGI:2384310
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Ube1x (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:22201 MGI:98890
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Pctk1 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:18555 MGI:97516
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	LOC100043098 (CDS detail)
type	mRNA
link	vega ensembl NCBI
xref	GI:149271001 GeneID:100043098
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 2 mRNAs, 3 ESTs, 1 Protein product : hypothetical protein LOC100043098 transcript_id : XM_001477741.1

name	EG628855 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:149271058 GeneID:628855 MGI:3647357
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 4 Proteins product : predicted gene, EG628855 transcript_id : XM_893647.3

name	BC049702 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:142379409 GeneID:278255 MGI:3037654
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : cDNA sequence BC049702 transcript_id : NM_207524.2

name	Chst7 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:11096335 GeneID:60322 MGI:1891767
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : carbohydrate (N-acetylglucosamino) sulfotransferase 7 transcript_id : NM_021715.1

name	Slc9a7 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:118130399 GeneID:236727 MGI:2444530
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : solute carrier family 9 (sodium/hydrogen exchanger), isoform 7 transcript_id : NM_177353.3

name	EG668996 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:149271060 GeneID:668996 MGI:3643654
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 5 Proteins product : predicted gene, EG668996 transcript_id : XM_001006687.2

name	Rp2h (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:141802725 GeneID:19889 MGI:1277953
definition	exception : mismatches in transcription note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : retinitis pigmentosa 2 homolog (human) transcript_id : NM_133669.3

name	Phf16 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:40556367 GeneID:382207 MGI:2148019
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : PHD finger protein 16 transcript_id : NM_199317.1

name	Rgn (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:118130555 GeneID:19733 MGI:108024
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : regucalcin transcript_id : NM_009060.2

name	Ndufb11 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:31980892 GeneID:104130 MGI:1349919
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : NADH dehydrogenase (ubiquinone) 1 beta subcomplex, 11 transcript_id : NM_019435.2

name	Rbm10 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:21704123 GeneID:236732 MGI:2384310
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : RNA binding motif protein 10 transcript_id : NM_145627.1

name	Ube1x (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:141803326 GeneID:22201 MGI:98890
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : ubiquitin-activating enzyme E1, Chr X transcript_id : NM_009457.3

name	Pctk1 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:142372498 GeneID:18555 MGI:97516
definition	exception : mismatches in transcription note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : PCTAIRE-motif protein kinase 1 transcript_id : NM_011049.3

name	LOC100043098 (CDS detail)
type	CDS
link	vega ensembl NCBI
xref	GI:149271002 GeneID:100043098
definition	codon_start : 1 product : hypothetical protein protein_id : XP_001477791.1

name	EG628855 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:149271059 GeneID:628855 MGI:3647357
definition	codon_start : 1 product : hypothetical protein protein_id : XP_898740.3

name	BC049702 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:46430510 CCDS:CCDS30039.1 GeneID:278255 MGI:3037654
definition	codon_start : 1 product : hypothetical protein LOC278255 protein_id : NP_997407.1

name	Chst7 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:11096336 CCDS:CCDS30040.1 GeneID:60322 MGI:1891767
definition	GO_component : GO:0016021 - integral to membrane [Evidence IEA]; GO:0016020 - membrane [Evidence IEA] GO_function : GO:0008459 - chondroitin 6-sulfotransferase activity [Evidence IEA]; GO:0008146 - sulfotransferase activity [Evidence IEA]; GO:0016740 - transferase activity [Evidence IEA] GO_process : GO:0005975 - carbohydrate metabolism [Evidence IEA] codon_start : 1 function : This enzyme catalyzes the transfer of sulfate from 3'-phosphoadenosine 5'-phosphosulfate to position 6 of the non-reducing GlcNAc residue of oligosaccharides product : carbohydrate (N-acetylglucosamino) sulfotransferase 7 protein_id : NP_068361.1

name	Slc9a7 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:28893491 GeneID:236727 MGI:2444530
definition	GO_component : GO:0005794 - Golgi apparatus [Evidence ISS]; GO:0005802 - Golgi trans face [Evidence ISS]; GO:0016021 - integral to membrane [Evidence IEA] [Evidence ISS] GO_function : GO:0015297 - antiporter activity [Evidence IEA]; GO:0030955 - potassium ion binding [Evidence IEA]; GO:0015386 - potassium:hydrogen antiporter activity [Evidence ISS]; GO:0042803 - protein homodimerization activity [Evidence ISS]; GO:0031402 - sodium ion binding [Evidence IEA]; GO:0015385 - sodium:hydrogen antiporter activity [Evidence ISS] [Evidence IEA] GO_process : GO:0006811 - ion transport [Evidence IEA]; GO:0006813 - potassium ion transport [Evidence IEA]; GO:0006885 - regulation of pH [Evidence ISS]; GO:0006814 - sodium ion transport [Evidence IEA]; GO:0006810 - transport [Evidence IEA] codon_start : 1 product : solute carrier family 9, member 7 protein_id : NP_796327.1

name	EG668996 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:149271061 GeneID:668996 MGI:3643654
definition	codon_start : 1 product : hypothetical protein protein_id : XP_001006687.2

name	Rp2h (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:19526820 CCDS:CCDS30041.1 GeneID:19889 MGI:1277953
definition	codon_start : 1 product : retinitis pigmentosa 2 homolog protein_id : NP_598430.1

name	Phf16 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:40556368 CCDS:CCDS30042.1 GeneID:382207 MGI:2148019
definition	GO_function : GO:0005515 - protein binding [Evidence IEA]; GO:0008270 - zinc ion binding [Evidence IEA] GO_process : GO:0006355 - regulation of transcription, DNA-dependent [Evidence IEA] codon_start : 1 product : PHD finger protein 16 protein_id : NP_955021.1

name	Rgn (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:6677739 CCDS:CCDS30043.1 GeneID:19733 MGI:108024
definition	GO_component : GO:0005737 - cytoplasm [Evidence IDA]; GO:0005634 - nucleus [Evidence IDA] GO_function : GO:0005509 - calcium ion binding [Evidence IEA]; GO:0030234 - enzyme regulator activity [Evidence IEA] codon_start : 1 product : regucalcin protein_id : NP_033086.1

name	Ndufb11 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:9506933 GeneID:104130 MGI:1349919
definition	GO_component : GO:0016020 - membrane [Evidence IEA]; GO:0005739 - mitochondrion [Evidence IDA] GO_function : GO:0008137 - NADH dehydrogenase (ubiquinone) activity [Evidence IEA]; GO:0003954 - NADH dehydrogenase activity [Evidence IEA]; GO:0016491 - oxidoreductase activity [Evidence IEA] codon_start : 1 note : nuclear protein 15.6 product : neuronal protein 15.6 protein_id : NP_062308.1

name	Rbm10 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:21704124 GeneID:236732 MGI:2384310
definition	GO_component : GO:0005622 - intracellular [Evidence IEA]; GO:0005634 - nucleus [Evidence IEA] GO_function : GO:0046872 - metal ion binding [Evidence IEA]; GO:0000166 - nucleotide binding [Evidence IEA]; GO:0003723 - RNA binding [Evidence IEA]; GO:0008270 - zinc ion binding [Evidence IEA] codon_start : 1 product : RNA binding motif protein 10 protein_id : NP_663602.1

name	Ube1x (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:6678483 CCDS:CCDS30044.1 GeneID:22201 MGI:98890
definition	GO_function : GO:0005524 - ATP binding [Evidence IEA]; GO:0003824 - catalytic activity [Evidence IEA]; GO:0016874 - ligase activity [Evidence IEA]; GO:0000166 - nucleotide binding [Evidence IEA]; GO:0004839 - ubiquitin activating enzyme activity [Evidence IEA] GO_process : GO:0006464 - protein modification [Evidence IEA]; GO:0006512 - ubiquitin cycle [Evidence IEA]; GO:0006511 - ubiquitin-dependent protein catabolism [Evidence IEA] codon_start : 1 product : ubiquitin-activating enzyme E1, Chr X protein_id : NP_033483.1

name	Pctk1 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:7242173 CCDS:CCDS30045.1 GeneID:18555 MGI:97516
definition	GO_function : GO:0005524 - ATP binding [Evidence IEA]; GO:0016301 - kinase activity [Evidence IEA]; GO:0000166 - nucleotide binding [Evidence IEA]; GO:0004672 - protein kinase activity [Evidence IEA]; GO:0004674 - protein serine/threonine kinase activity [Evidence IEA]; GO:0016740 - transferase activity [Evidence IEA] GO_process : GO:0006468 - protein amino acid phosphorylation [Evidence IEA] codon_start : 1 product : PCTAIRE-motif protein kinase 1 protein_id : NP_035179.1

name	LOC385333 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:385333
definition	number : 1 pseudo : _no_value

name	LOC385333 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:385333
definition	number : 2 pseudo : _no_value

name	EG628871 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:628871
definition	number : 1 pseudo : _no_value

name	EG628871 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:628871
definition	number : 2 pseudo : _no_value

name	EG628871 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:628871
definition	number : 3 pseudo : _no_value

name	EG628871 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:628871
definition	number : 4 pseudo : _no_value

name	LOC100043953 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:100043953
definition	number : 1 pseudo : _no_value

name	LOC675558 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:675558
definition	number : 1 pseudo : _no_value

name	LOC675558 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:675558
definition	number : 2 pseudo : _no_value

name	LOC675558 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:675558
definition	number : 3 pseudo : _no_value

name	LOC100043954 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:100043954
definition	number : 1 pseudo : _no_value

name	LOC668995 (CDS detail)
type	misc_RNA
link	vega ensembl NCBI
xref	GI:149271003 GeneID:668995
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 7 ESTs, 5 Proteins product : similar to rat ribosomal protein L36 pseudo : _no_value transcript_id : XR_033384.1

name	LOC385336 (CDS detail)
type	misc_RNA
link	vega ensembl NCBI
xref	GI:149271004 GeneID:385336
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 10 mRNAs, 667 ESTs, 8 Proteins product : similar to ribosomal protein L23a pseudo : _no_value transcript_id : XR_033388.1

name	LOC668277 (CDS detail)
type	misc_RNA
link	vega ensembl NCBI
xref	GI:149271005 GeneID:668277
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 146 ESTs, 6 Proteins product : similar to 37kDa oncofetal antigen pseudo : _no_value transcript_id : XR_033431.1

name	LOC668283 (CDS detail)
type	misc_RNA
link	vega ensembl NCBI
xref	GI:149271006 GeneID:668283
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 mRNA, 2 ESTs product : similar to general transcription factor IIa precursor pseudo : _no_value transcript_id : XR_033437.1

clone name	MSMg01-348A08
singlet/doublet	doublet
plural/unique	plural

clone name	MSMg01-387O17
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-048J01
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-387I19
singlet/doublet	singlet
plural/unique	plural

clone name	MSMg01-541P07
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-446A11
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-141A22
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-496K15
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-500P18
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-124M12
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-313C02
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-361N24
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-081C12
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-082J09
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-297O05
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-303B10
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-432N09
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-063M11
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-126K04
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-056H05
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-154K11
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-481O16
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-465F23
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-052P06
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-376C23
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-516F17
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-212N22
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-356K20
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-198G22
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-454N20
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-092K02
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-412D17
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-102G09
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-157D03
singlet/doublet	singlet
plural/unique	plural

clone name	MSMg01-419I19
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-433J24
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-453M04
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-123H15
singlet/doublet	singlet
plural/unique	plural

clone name	MSMg01-449K16
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-461L22
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-106A11
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-269G21
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-204I01
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-120M07
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-308F19
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-108K06
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-108J14
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-043A12
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-006P15
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-086C05
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-175E08
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-080P23
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-094O19
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-200I14
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-169J19
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-205B17
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-167E12
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-231B07
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-083A11
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-190I24
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-105J11
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-084G16
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-105E16
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-289M03
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-233E14
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-082B16
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-325O11
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-150O11
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-253N18
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-253E20
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-213I03
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-259H13
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-193L23
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-254J15
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-218O19
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-063B13
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-236J19
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-062D10
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-029D15
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-114D20
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-067I13
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-136N15
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-264L01
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-336O16
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-184H09
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-080C13
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-056B17
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-110G01
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-068A20
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-185K24
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-030E23
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-034E14
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-019N23
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-320H13
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-243J06
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-068I02
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-092N11
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-265F10
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-287D03
singlet/doublet	doublet
plural/unique	unique

BAC End Information

BAC end	BAC-end 1	BAC-end 2
end name	B6Ng01-259H13.b	B6Ng01-259H13.g
ACC	GA064644	GA064645
length	131	1,162
definition	B6Ng01-259H13.b	B6Ng01-259H13.g
singlet/doublet	doublet	doublet
BLAST hit	unique	unique
Map location.	(19,106,819 - 19,106,949)	(19,278,646 - 19,279,781)
sequence	catatcttccttccagagtagtatcaagatcaggtcaaacaggttgaata acaaaaaatttactctaatagggacattgaaaatttatgcccatcctctc ttctcttctcctctcctctcctctccactcc	gaattcctttgatcactgatgggtgaagcacactttgcatgtggaaaatt ctgaaaacagaaggatacataaattagattgatttcaaggtttcttaaaa tcaatcctcttagctctttacaaccctgaatctttgtactctcccttact ttcctaactgttatttggtttgttggggcatgctgacctttatcttagag tctgtatcccaggaaacaagcacaatacctctcaaatgccttggctgctt atatcactctgttgcttacatcattgtttctgcttcctgagagcaccagc taacatccatgcctcatctaatactactgattgttttgggtgaggggcca ggctacggatgcaacttcaactatgatgtttatgctgggctctaataccc agctaagacctggtagaccaatagaggtcccagcttccccagcagctcca cttgagtgcagtagaaaagaaagttctgtggggatgactttgatgaataa gagaggatggatgagtttctcggggttgtgtcactgtgaaccagctggat gttgtgcataagctatagccagttcggtaatattacctgcaagggcttta tgccctaccacctgtatatgcctccttacctacataggtcctcccacttg cttatgccttcctaggtacaaaagctctcccacctgcataaagcctccta cttgcctctgtctttcatttgcataagccctcctcctgcctctgccttct ttcccatctgcatataagcccttctactggccttttcctcttcttttgca taagccctctacctatcttcccacctgcataagccctcccacctacatgc cctctcacctgcatttacctcttctaatctgtttactcttttttcccata agcatttgctcagcctgccttgtatattctccctcactgaaaggtactcc cttttgtgccttgcttccaccacacccctacctcctttactaggctttcc tttcctaaattgccttccccaagatgagcccctttcctttacaattctag ggaataaaaccatcaaaataggaatgtgttcttagcacataggatatcaa tttgccctgggtaataaaaaagcattgaatcatctgcatttaaggcctgt ttccaccataaa
quality values	Open. Hide. 36 12 62 62 59 59 59 62 54 62 59 62 59 29 22 59 62 59 59 62 59 59 49 59 49 41 43 38 59 46 28 20 28 33 44 46 48 48 62 62 59 62 59 62 62 59 62 62 62 62 62 62 62 62 62 62 62 59 59 62 62 62 62 62 49 49 62 62 62 62 49 62 54 54 59 56 59 62 62 62 62 62 62 59 62 62 62 59 59 62 62 59 59 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 14 18 13 10 13 10 13 21 25 18 13 13 5	Open. Hide. 62 47 51 44 62 62 62 62 62 56 56 44 59 35 17 43 45 33 20 24 38 49 56 59 62 59 62 62 62 62 62 62 59 62 62 62 54 54 62 62 62 62 62 62 54 62 62 62 59 62 62 62 62 62 62 59 59 59 49 32 49 56 59 62 59 59 62 62 62 62 62 54 54 54 42 54 56 62 62 62 62 59 62 62 62 59 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 54 54 62 62 62 62 62 62 62 62 59 62 62 62 62 62 62 62 59 59 54 54 62 62 62 62 62 62 62 62 59 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 59 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 59 62 62 62 54 59 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 59 62 59 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 59 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 59 59 62 62 62 62 62 62 62 62 62 59 62 62 62 62 62 62 62 62 62 62 59 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 59 62 62 62 62 62 59 62 62 62 62 62 62 59 59 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 59 62 62 62 62 62 62 59 62 62 62 62 62 62 62 62 59 62 62 62 62 62 62 62 59 59 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 54 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 49 47 62 62 62 62 62 62 62 54 62 62 62 62 62 62 62 62 62 62 62 62 62 62 41 62 62 54 47 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 54 62 62 62 62 62 62 62 62 62 62 52 62 62 62 62 62 49 54 42 62 62 62 62 52 62 54 47 62 54 62 62 46 62 58 52 58 58 54 54 54 54 53 58 54 42 50 54 52 54 52 51 52 52 52 54 58 54 54 54 44 49 45 54 58 58 49 42 54 58 54 54 54 54 47 46 42 34 52 58 50 58 54 54 51 54 54 58 54 58 54 58 58 58 47 52 45 54 45 54 42 42 42 52 38 54 52 52 58 50 50 58 40 50 51 58 49 58 51 58 41 39 52 50 54 49 54 48 51 51 41 51 34 45 31 50 41 41 45 58 58 50 58 51 50 50 42 49 40 32 50 48 52 58 49 40 50 47 58 58 50 50 58 52 58 50 50 46 33 58 50 46 51 50 39 32 32 58 40 53 52 58 53 39 35 51 58 52 50 39 41 31 33 19 9 19 19 33 39 50 32 41 51 50 40 58 19 58 43 40 37 43 50 50 41 41 53 24 58 39 41 58 34 33 39 38 41 38 45 40 33 35 42 37 46 29 42 26 15 35 51 47 20 28 40 19 54 18 13 33 27 54 54 45 42 53 42 45 28 37 32 29 53 52 51 45 21 21 29 17 21 22 33 54 35 52 38 26 40 31 24 21 42 30 33 41 45 52 54 27 13 9 54 35 40 33 31 33 33 52 29 28 52 40 41 25 33 14 20 30 31 32 31 32 17 31 41 16 47 46 34 21 31 27 32 17 25 24 41 32 31 39 52 19 31 41 28 32 38 40 9 23 21 51 25 21 31 31 35 28 51 32 26 26 35 25 18 51 51 51 51 29 30 37 23 14 26 40 31 32 32 33 31 51 31 35 33 31 18 9 5 6 9 9 46 18 37 11 8 8 20 26 26 31 36 31 31 15 21 46 30 30 29 20 30 13 15 7 46 8 31 35 8 18 21 31 27 41 16 6 46 31 27 25 11 9 14 11 10 15 32 18 15 36 31 19 16 13 9 5 13 16 7 41 39 30 11 18 9 35 10 15 39 17 47 31 35 31 11 21 25 31 13 30 48 31 14 25 27 36 35 8 8 36 11 38 7 14 17 22 9 13 23 11 7 41 38 7 14 11 10 25 15 19 22 8 10 16 22 17 21 34 13 22 26 20 48 30 9 21 21 12 6 7 10 23 26 18 32 11 19 8 11 5 33 39 33 7 6 14 17 32 26 39 36 24 9 14 19 24 8 13 18 32 7 11 9 10 8 8 16 28 12 23 7 13 10 18 4 3 4 16 8 16 9 7 9 11 9 28 9 8 7 29 9 10 8 10 4 7 28 6 3 3 13 17 47 28 10 7 26 15 8 11 27 9 10 27 16 7 9 5 14 18 12 10 15 28 10 22 23 9 10 7 20 6 22 7 19 7 3 4 7 4 4 4 10 8 24 25

Alignment Information

BAC End 1

BAC End 2

seq1: chrX_19106819_19106949
seq2: B6Ng01-259H13.b_48_178

seq1  CATATCTTCCTTCCAGAGTAGTATCAAGATCAGGTCAAACAGGTTGAATA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATATCTTCCTTCCAGAGTAGTATCAAGATCAGGTCAAACAGGTTGAATA  50

seq1  ACAAAAAATTTACTCTAATAGGGACATTGAAAATTTATGCCCATCCTCTC  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAAAAAATTTACTCTAATAGGGACATTGAAAATTTATGCCCATCCTCTC  100

seq1  TTCTCTTCTCCTCTCCTCTCCTCTCCTCTCC  131
      |||||||||||||||||||||||||| ||||
seq2  TTCTCTTCTCCTCTCCTCTCCTCTCCACTCC  131

seq1: chrX_19278646_19279781
seq2: B6Ng01-259H13.g_67_1228 (reverse)

seq1  TTTATGGTGG-AACAGGC--TTAATGCAGAATGAT--CATGC--TTTTAT  43
      |||||||||| |||||||  | ||||||| |||||   ||||  ||||||
seq2  TTTATGGTGGAAACAGGCCTTAAATGCAG-ATGATTCAATGCTTTTTTAT  49

seq1  TA--CAAGGC-AATTGATATCCTATGTGCTAAG-ACACA-TCCTATTTTG  88
      ||  || ||| |||||||||||||||||||||| ||||| ||||||||||
seq2  TACCCAGGGCAAATTGATATCCTATGTGCTAAGAACACATTCCTATTTTG  99

seq1  AT-GTTTTAT--CCTAG-ATTGTAAAGGAA--GGGCTCATCTTGGG--AA  130
      || |||||||  ||||| ||||||||||||  ||||||||||||||  | 
seq2  ATGGTTTTATTCCCTAGAATTGTAAAGGAAAGGGGCTCATCTTGGGGAAG  149

seq1  GCAA-TTAAGAAAGGAAAGCCTAGTAAAGGAGGTA-GGGTGT-GTGGAAG  177
      |||| ||| |||||||||||||||||||||||||| |||||| |||||||
seq2  GCAATTTAGGAAAGGAAAGCCTAGTAAAGGAGGTAGGGGTGTGGTGGAAG  199

seq1  CAAGGCAC-AAAGGGAGTACC-TTCAGTGAGGGAGAATATAC-AGGCAGG  224
      |||||||| |||||||||||| |||||||||||||||||||| |||||||
seq2  CAAGGCACAAAAGGGAGTACCTTTCAGTGAGGGAGAATATACAAGGCAGG  249

seq1  CTGAGCAAATGCTTATGGG-AAAAAGAGTAAACAGATTAGAAGAGGTAAA  273
      ||||||||||||||||||| ||||||||||||||||||||||||||||||
seq2  CTGAGCAAATGCTTATGGGAAAAAAGAGTAAACAGATTAGAAGAGGTAAA  299

seq1  TGCAGGTGAGAGGGCATGTAGGTGGGAGGGCTTATGCAGGTGGGAAGATA  323
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCAGGTGAGAGGGCATGTAGGTGGGAGGGCTTATGCAGGTGGGAAGATA  349

seq1  GGTAGAGGGCTTATGCAAAAGAAGAGGAAAAGGCCAGTAGAAGGGCTTAT  373
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTAGAGGGCTTATGCAAAAGAAGAGGAAAAGGCCAGTAGAAGGGCTTAT  399

seq1  ATGCAGATGGGAAAGAAGGCAGAGGCAGGAGGAGGGCTTATGCAAATGAA  423
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGCAGATGGGAAAGAAGGCAGAGGCAGGAGGAGGGCTTATGCAAATGAA  449

seq1  AGACAGAGGCAAGTAGGAGGCTTTATGCAGGTGGGAGAGCTTTTGTACCT  473
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGACAGAGGCAAGTAGGAGGCTTTATGCAGGTGGGAGAGCTTTTGTACCT  499

seq1  AGGAAGGCATAAGCAAGTGGGAGGACCTATGTAGGTAAGGAGGCATATAC  523
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGAAGGCATAAGCAAGTGGGAGGACCTATGTAGGTAAGGAGGCATATAC  549

seq1  AGGTGGTAGGGCATAAAGCCCTTGCAGGTAATATTACCGAACTGGCTATA  573
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGTGGTAGGGCATAAAGCCCTTGCAGGTAATATTACCGAACTGGCTATA  599

seq1  GCTTATGCACAACATCCAGCTGGTTCACAGTGACACAACCCCGAGAAACT  623
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTTATGCACAACATCCAGCTGGTTCACAGTGACACAACCCCGAGAAACT  649

seq1  CATCCATCCTCTCTTATTCATCAAAGTCATCCCCACAGAACTTTCTTTTC  673
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATCCATCCTCTCTTATTCATCAAAGTCATCCCCACAGAACTTTCTTTTC  699

seq1  TACTGCACTCAAGTGGAGCTGCTGGGGAAGCTGGGACCTCTATTGGTCTA  723
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACTGCACTCAAGTGGAGCTGCTGGGGAAGCTGGGACCTCTATTGGTCTA  749

seq1  CCAGGTCTTAGCTGGGTATTAGAGCCCAGCATAAACATCATAGTTGAAGT  773
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCAGGTCTTAGCTGGGTATTAGAGCCCAGCATAAACATCATAGTTGAAGT  799

seq1  TGCATCCGTAGCCTGGCCCCTCACCCAAAACAATCAGTAGTATTAGATGA  823
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCATCCGTAGCCTGGCCCCTCACCCAAAACAATCAGTAGTATTAGATGA  849

seq1  GGCATGGATGTTAGCTGGTGCTCTCAGGAAGCAGAAACAATGATGTAAGC  873
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGCATGGATGTTAGCTGGTGCTCTCAGGAAGCAGAAACAATGATGTAAGC  899

seq1  AACAGAGTGATATAAGCAGCCAAGGCATTTGAGAGGTATTGTGCTTGTTT  923
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACAGAGTGATATAAGCAGCCAAGGCATTTGAGAGGTATTGTGCTTGTTT  949

seq1  CCTGGGATACAGACTCTAAGATAAAGGTCAGCATGCCCCAACAAACCAAA  973
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTGGGATACAGACTCTAAGATAAAGGTCAGCATGCCCCAACAAACCAAA  999

seq1  TAACAGTTAGGAAAGTAAGGGAGAGTACAAAGATTCAGGGTTGTAAAGAG  1023
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAACAGTTAGGAAAGTAAGGGAGAGTACAAAGATTCAGGGTTGTAAAGAG  1049

seq1  CTAAGAGGATTGATTTTAAGAAACCTTGAAATCAATCTAATTTATGTATC  1073
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTAAGAGGATTGATTTTAAGAAACCTTGAAATCAATCTAATTTATGTATC  1099

seq1  CTTCTGTTTTCAGAATTTTCCACATGCAAAGTGTGCTTCACCCATCAGTG  1123
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTCTGTTTTCAGAATTTTCCACATGCAAAGTGTGCTTCACCCATCAGTG  1149

seq1  ATCAAAGGAATTC  1136
      |||||||||||||
seq2  ATCAAAGGAATTC  1162

BAC Information

Search Parameter

Search Result

BAC

BAC End Information

Alignment Information