BAC Information

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BAC

Clone NameB6Ng01-259O18
ChromosomeX (Build37)
Map Location 106,679,194 - 106,680,001
singlet/doubletsinglet
Overlap genenone
Upstream geneGm379, Brwd3, 5730416F02Rik, Nsbp1, Sh3bgrl, EG622976, LOC100042831, LOC213474
Downstream geneLOC245573, EG634340
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-259O18.bB6Ng01-259O18.g
ACCGA064978GA064979
length1,0421,195
definitionB6Ng01-259O18.b B6Ng01-259O18.g
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gtatgtctagtgagttatggttttcccgagattctcatagtcttttgttt
taggttttataaggcttattctcaaataaaagcagaagggttatcagtca
acaccatctttttcgctcccacaggttatgtccagaaaggtgtttctagg
ggctaacagctgtttgcaggttagaaatgtgaacttcagtgcctggtttc
ctgctgaaaacacagactgggatcttacctgtccataagacttctgcacc
aagccacacaggtctctatgttactttggttttctggccatgtgagttac
actgtcagattttgtttattggatattttctttattacatatcaaatgtt
gttccctttcttggtcccccgaaaccccttattccatcacctctgaccct
gcttctgtgagggtattcctccacccaaccatgcaatcctgcctacctgc
cctcgaattcccctacactggggcatcaaacctttacaggacaaaggtcc
tctcctcccattgatgcccaacaaggtcatcctcagcttcatatgcagct
ggagccatgagtcctaccatgtgtactccttggttggtggtttagtcact
gggagctctgggggacctagttggtttatactgttcttcttatggggtta
caaattccttcagctccttcagtcctttctctaactcctccattggggac
cctgtgctcagtccaatggttggctgccagtaactgtctccgtatttgtc
agactctcaggagagagccatatcagctcctgtcagcatgcacttctggg
catccacaatagtgtctgggtttggtgactgtatttgggatgaatcccca
ggtggggcaatgtctgtatggcctttccttcagtctctgcttcaactttt
gtctctgtatttgctcccgttcatattttgttaccgtttctaataaagga
ccaaagcacccacactttggtcttctctcttcttgagcttcatgtgtttg
tgattgtatcctggtatcccaagcttggggctaatatccact

gaattccttctttatgtcctctaccatcatcatgagctatgcttttaact
ccaggtctaccttttcaggtgtgttagggtgtcctggactgggcgaattg
gccgttctgggttctgatgatggtgagtggtcatggtttctgttagtagg
attcttgtgtttacctttgccatctggcaatctctcgagttagttgttat
agttgtctttgttaagagattgttcctctgttgattttgttaccctcaat
cagcaggcgtgggagacacgctctctcctctgagtttcagtggtcagagc
agtctctgcaggcaagctctcctctttcggggaaggtgtacagttacctg
gtgtttggacctcctcctggctgaaggtgaaggcccaaaacaggatcttt
cccagaagctgtgttactttggccaggaaggtggccggttgtctggagcc
gaagatggcgccgcctcagaagctctgtgactctcgccaggaaggtggcc
ggttgtctggagccgaagatggcaccgcctcagaagctctgtggctctcg
ccaggaaggtggccggttgtctggagctgaagatggtgccaccccagaag
ctctgcgactctcgcccgtcccagaaacggctggcactctgtattccaca
gggtcacccgtgcagcctgccctccgcggagtcccggagccaagaaggct
cccgccggcgcctgtgacacaaacctctcaggccgggcagacccccgtgc
tctcaccaggaaggtagccggctgtctagagctgaagatggcgccgtccc
agaggctctgcgactctcgcccataccagaaatggctggcctctgtattc
cacacggtcacccgtgcagcctgccctctgcggagtcccggagccaagaa
gtctcccgccgacgcctgtgacacaaacctctccgagccaccgattctta
attcaaaaaaaataaaaagcaaattgccctgtagagtcaaattccatttg
gtattatgaatgccatggcctccatcatctgcactgctcctctgcattat
cttattatctctatgtcccgcaggaatctcatggaaattctggaaacact
cagtggcttgaatttttgtggttaccttcactgtattaaattatcacagg
ttctcttctcagacgcatccctgcgtctttattcactataccgag
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chrX_106679194_106680001
seq2: B6Ng01-259O18.b_58_864

seq1  GTATGTCTAGTGAGTTATGGTTTTCAAGAGATTCTCATAGTCTTTTGTTT  50
      |||||||||||||||||||||||||  |||||||||||||||||||||||
seq2  GTATGTCTAGTGAGTTATGGTTTTCCCGAGATTCTCATAGTCTTTTGTTT  50

seq1  TAGGTTTTATAAGGCTTATTCTCAAATAAAAGCAGAAGGGTTATCAGTCA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGGTTTTATAAGGCTTATTCTCAAATAAAAGCAGAAGGGTTATCAGTCA  100

seq1  ACACCATCTTTTTCGCTCCCACAGGTTATGTCCAGAAAGGTGTTTCTAGG  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACACCATCTTTTTCGCTCCCACAGGTTATGTCCAGAAAGGTGTTTCTAGG  150

seq1  GGCTAACAGCTGTTTGCAGGTTAGAAATGTGAACTTCAGTGCCTGGTTTC  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGCTAACAGCTGTTTGCAGGTTAGAAATGTGAACTTCAGTGCCTGGTTTC  200

seq1  CTGCTGAAAACACAGACTGGGATCTTACCTGTCCATAAGACTTCTGCACC  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGCTGAAAACACAGACTGGGATCTTACCTGTCCATAAGACTTCTGCACC  250

seq1  AAGCCACACAGGTCTCTATGTTACTTTGGTTTTCTGGCCATGTGAGTTAC  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGCCACACAGGTCTCTATGTTACTTTGGTTTTCTGGCCATGTGAGTTAC  300

seq1  ACTGTCAGATTTTGTTTATTGGATATTTTCTTTATTACATATCAAATGTT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTGTCAGATTTTGTTTATTGGATATTTTCTTTATTACATATCAAATGTT  350

seq1  GTTCCCTTTCTTGGTCCCCCGAAACCCCTTATTCCATCACCTCTGACCCT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTCCCTTTCTTGGTCCCCCGAAACCCCTTATTCCATCACCTCTGACCCT  400

seq1  GCTTCTGTGAGGGTATTCCTCCACCCAACCATGCAATCCTGCCTACCTGC  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTTCTGTGAGGGTATTCCTCCACCCAACCATGCAATCCTGCCTACCTGC  450

seq1  CCTCGAATTCCCCTACACTGGGGCATCAAACCTTTACAGGACAAAGGTCC  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTCGAATTCCCCTACACTGGGGCATCAAACCTTTACAGGACAAAGGTCC  500

seq1  TCTCCTCCCATTGATGCCCAACAAGGTCATCCTCAGCTTCATATGCAGCT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTCCTCCCATTGATGCCCAACAAGGTCATCCTCAGCTTCATATGCAGCT  550

seq1  GGAGCCATGAGTCCTACCATGTGTACTCCTTGGTTGGTGGTTTAGTCACT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGAGCCATGAGTCCTACCATGTGTACTCCTTGGTTGGTGGTTTAGTCACT  600

seq1  GGGAGCTCTGGGGGACCTAGTTGGTTTATACTGTTCTTCTTATGGGGTTA  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGAGCTCTGGGGGACCTAGTTGGTTTATACTGTTCTTCTTATGGGGTTA  650

seq1  CAAATTCCTTCAGCTCCTTCAGTCCTTTCTCTAACTCCTCCATTGGGGAC  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAATTCCTTCAGCTCCTTCAGTCCTTTCTCTAACTCCTCCATTGGGGAC  700

seq1  CCTGTGCTCAGTCCAATGGTTGGCTGCCAGTAACTGTCTCCGTATTTGTC  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTGTGCTCAGTCCAATGGTTGGCTGCCAGTAACTGTCTCCGTATTTGTC  750

seq1  AGACTCTCAGGAGAGAGCCATATCAGGCTCCTGTCAGCATGCACTTCTGG  800
      ||||||||||||||||||||||||| ||||||||||||||||||||||||
seq2  AGACTCTCAGGAGAGAGCCATATCA-GCTCCTGTCAGCATGCACTTCTGG  799

seq1  GCATCCAC  808
      ||||||||
seq2  GCATCCAC  807


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