BAC Information

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BAC

Clone NameB6Ng01-261G10
ChromosomeX (Build37)
Map Location 107,218,890 - 107,219,435
singlet/doubletsinglet
Overlap genenone
Upstream geneSh3bgrl, EG622976, LOC100042831, LOC213474, LOC245573
Downstream geneEG634340, LOC668530, LOC100043316, Pou3f4
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-261G10.bB6Ng01-261G10.g
ACCGA066080GA066081
length5401,191
definitionB6Ng01-261G10.b B6Ng01-261G10.g
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
tacatgttctgctcctctgacctgggaaccttacaaggtgaccagccaaa
tgcctctgggaaatattataattagtgagttaatctagactcagtatgat
aaatatctgatgttctttctccctcgtgtgtatattaacttttgatctct
aattcattgttcaatttgcagtaaaaacaaaaagctagaaaaaagccatt
gagggtgccttaagcaacaatagttgaatataggtagtataaaaattgag
aggagtgatattaagtatatagagccttaaccagagaagaataaaggaga
tagcactgaaagtgataggggaatcaagacaaaggactatgaaaaagaca
tgtcaaaatgaatattgaactaaccagtaccctcagagctcatgtctctg
gctgcataggtagcagaagatgccctagttgtccatcattgggaagagaa
gcccctaggtcttgcaaactttatatgctccagtacaggggaatgccagg
gccaagaagtagaagaggttgggtaggggagaagggcggg

gaattcaagaaggtggactccagaaaatcaaataatcccattgaaaaatg
gggctcagagctaaacaaagagttttcacctgaggaatactgaatggctg
agaagcacctgaaaaaatgttcaccatccttaatcatcaggggaatgcaa
atcaaaacaacctgagattattccatctcacaccagtcagaatggctaag
atcataaattcaggtgacatcagatgctggcaaggatatggagaaagagg
aacactcctctattgttggtgggattgcaagcttgtacaaccacgctgga
aatcagtctgtctgttcctcagaaaattggacatagtactactggaggat
cctgcaatacctctcctgggcatatatccagaacatgttccaactagtaa
gaaagacacattctctactatgttcatagcagccttatttattatagcaa
gaagctgggaagaacctagatgcctctcaacagaggaatggatacaaaaa
aatgttgtttatttacacaatggagtactactcagctattaaaaagaatg
aatttatgaaattcctaggcaaagggttggacctggaggatatcatcctg
agtgaggtaacccaatcacaaaataactcacacaatatgtactcactgat
aattggatattagcccagaaacttagaatacccaagatataagatacaat
ttatgaaacacatgaaactcaagaagaatcaagaacaaagtttggacact
ttgccccttcttagaattgggaacaaaacacccatggaagtagttacaga
gacaaagtttggagcagagacaaaaggatggaccatctagagcctgccat
atcctgggatccatcccataatcagcctccaaacgctgacacgattgcac
acactagcaagattttgctgaaaggaccctgatatagctgttctcttgtg
agactatgctgaggcctagcaaacacagaagtggatgctcacagtcggct
attggatggatcataggcccccaatgaggagctagagtagaccaagagct
aaggatctgcacctattttgtgaacatcaatatgactaccagtatcagag
cctctttgtctctagctgcatattgttatcaaatggcctaagtctgtcat
tcgtgaagagagctcaattgtgttcaatgctaacactggtt
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chrX_107218890_107219435
seq2: B6Ng01-261G10.b_49_594

seq1  GAATTCTACATGTTCTGCTCCTCTGACCTGGGAACCTTACAAGGTGACCA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTACATGTTCTGCTCCTCTGACCTGGGAACCTTACAAGGTGACCA  50

seq1  GCCAAATGCCTCTGGGAAATATTATAATTAGTGAGTTAATCTAGACTCAG  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCCAAATGCCTCTGGGAAATATTATAATTAGTGAGTTAATCTAGACTCAG  100

seq1  TATGATAAATATCTGATGTTCTTTCTCCCTCGTGTGTATATTAACTTTTG  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATGATAAATATCTGATGTTCTTTCTCCCTCGTGTGTATATTAACTTTTG  150

seq1  ATCTCTAATTCATTGTTCAATTTGCAGTAAAAACAAAAAGCTAGAAAAAA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCTCTAATTCATTGTTCAATTTGCAGTAAAAACAAAAAGCTAGAAAAAA  200

seq1  GCCATTGAGGGTGCCTTAAGCAACAATAGTTGAATATAGGTAGTATAAAA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCCATTGAGGGTGCCTTAAGCAACAATAGTTGAATATAGGTAGTATAAAA  250

seq1  ATTGAGAGGAGTGATATTAAGTATATAGAGCCTTAACCAGAGAAGAATAA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTGAGAGGAGTGATATTAAGTATATAGAGCCTTAACCAGAGAAGAATAA  300

seq1  AGGAGATAGCACTGAAAGTGATAGGGGAATCAAGACAAAGGACTATGAAA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGAGATAGCACTGAAAGTGATAGGGGAATCAAGACAAAGGACTATGAAA  350

seq1  AAGACATGTCAAAATGAATATTGAACTAACCAGTACCCTCAGAGCTCATG  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGACATGTCAAAATGAATATTGAACTAACCAGTACCCTCAGAGCTCATG  400

seq1  TCTCTGGCTGCATAGGTAGCAGAAGATGCCCTAGTTGTCCATCATTGGGA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTCTGGCTGCATAGGTAGCAGAAGATGCCCTAGTTGTCCATCATTGGGA  450

seq1  AGAGAAGCCCCTAGGTCTTGCAAACTTTATATGCTCCAGTACAGGGGAAT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAGAAGCCCCTAGGTCTTGCAAACTTTATATGCTCCAGTACAGGGGAAT  500

seq1  GCCAGGGCCAAGAAGTAGAAGAGGTTGGGTAGGGGAGAAGGGCGGG  546
      ||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCCAGGGCCAAGAAGTAGAAGAGGTTGGGTAGGGGAGAAGGGCGGG  546


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