BAC Information

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BAC

Clone NameB6Ng01-261O24
ChromosomeX (Build37)
Map Location 156,432,479 - 156,433,594
singlet/doubletsinglet
Overlap genenone
Upstream geneLOC100040371, Rps6ka3, Eif1ay, Mtap7d2, A830080D01Rik, LOC100041359, Sh3kbp1
Downstream geneLOC667524, Pdha1, LOC100041403, LOC100041416, LOC100041427, Gpr64, Phka2, Ppef1, Rs1, Gja6
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-261O24.bB6Ng01-261O24.g
ACCGA066485GA066486
length1,138989
definitionB6Ng01-261O24.b B6Ng01-261O24.g
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattcattgctactgcataactgtaattttgctactggaatgaactgca
atgtaaatagctgtgttttccaatggtcttaggtgacctctttgaaaagg
tcacccccaaaggaagtgacctacaggttgagaaccgctgcgacagtatt
tcagtgcatgaagatgccacagtttgttttctattatgaataagcattcg
agttgcttctgtctggagataatcatgaatagtgctgctgttatgaatag
tctagtacttaggcttttgacaactttatgcgatgtaatgctcttatgta
aagtataaagtacagtggatttgggtatattcacagttatagtgccatca
ccactgtcaaattttagattatttctattagccctcaaataacaactcac
tcttgtagaaccacctggaatctagtgagaactgcattaatcctttctaa
gggcagcgaccccagtgacctagccactttatactaggaccacctcttaa
aggtcccattatctttataccaccacactgaacataaaatatttcaacac
ataaaccttgagagacacagccaaatcatatataaaaccatggcttccaa
atactcatatgaactgggagcaattaccatttttatgtttagaatagcta
ttcgattcgttagatttcacaagaccaaaatttcaaaccttgtaagatga
gtttgtttataatgtcctgagaatgaaaattctgcatcaagaatgctgct
tgttcctaaagcctatggcttatggaagtatgctgcatgaaaataataag
cactgtgcatttcattgtacagtggatatcagacacgagataatacaatg
aatctagacgaggttaaagacaaagaatgatgtctttcatatcgaacaga
gtctccaaccaccaaatgaactcagtggctctttaaagggctgtgggtga
cagatgccaatgaggaagtcattaaagcacagaagaaggtgaaatcagca
gtccatgccaaaagttcccagtgttttagtgatctttgaaggaacaattg
atttttccttcagtaaaaggagagcaaggatgattgtttgggggaataag
atgcaaatccctcagttcccttttcccttgactgacac
gaattccacttcaaacacctacctaaacctgaagagcatcttccaaagta
tcccacagttcagaaatatcagttccagtatgggttctggttggtgggaa
gttgtgtgaacagtatggtcaggaaagccctcaccaaagaggtaatgttt
gaacaaatgtcactgggttgagaaacaagatgtgaaagtatgtatgcaac
gaatattcttggtggacaagttaacatgcacaacagacctgaggtgggaa
taaccttggtgtgctcaaaaatagcaagaaacaccagtgtggttatgtaa
ccctagaatttggaaggtagaagaaagacgctaaagagtcccaagccctg
tacaaccactctggaaatccgtctggcggttcctcagaaaattggacata
gtactaccagaggatcctgcaatacctctcctgggcatatatccagaaga
tgttccaaccggtaagaaggacacatgctccactatgttcatagcagcct
tatttataatagccagaagctggaaagaacccagatgcccctcaacagag
gaatggatacagaaaatgtggtacacttacacaatggagtactactcagc
tattaaaaagaatgaattttatgaaattcctagccaaatggatggacctg
gagggtatcttcctgagtgaggtaacccaatcacaaaggaactcacacaa
tatgtactcactgataagtggatattagcccagaaacttagaatacccaa
gatataagatacaatttgctaaacgcatgaaactcaaagaagaaggaaga
ccaaagtgtggacacttttgcacccttcttagaattggggaacaaaaaca
cctatgggaaaggagtttacagagacaaagttttgaagctgagataaaaa
ggatgggatcatctagaaactgcccatatccgggaatccattcccataat
cagcttccaacgctgacaccattgcatacactagcaaga
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chrX_156432479_156433594
seq2: B6Ng01-261O24.b_46_1183

seq1  GAATTCATTGCTACTGCATAACTGTAATTTTGCTACTGGAATGAACTGCA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCATTGCTACTGCATAACTGTAATTTTGCTACTGGAATGAACTGCA  50

seq1  ATGTAAATAGCTGTGTTTTCCAATGGTCTTAGGTGACCTCTTTGAAAAGG  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGTAAATAGCTGTGTTTTCCAATGGTCTTAGGTGACCTCTTTGAAAAGG  100

seq1  TCACCCCCAAAGGAAGTGACCTACAGGTTGAGAACCGCTGCGACAGTATT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCACCCCCAAAGGAAGTGACCTACAGGTTGAGAACCGCTGCGACAGTATT  150

seq1  TCAGTGCATGAAGATGCCACAGTTTGTTTTCTATTATGAATAAGCATTCG  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCAGTGCATGAAGATGCCACAGTTTGTTTTCTATTATGAATAAGCATTCG  200

seq1  AGTTGCTTCTGTCTGGAGATAATCATGAATAGTGCTGCTGTTATGAATAG  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTTGCTTCTGTCTGGAGATAATCATGAATAGTGCTGCTGTTATGAATAG  250

seq1  TCTAGTACTTAGGCTTTTGACAACTTTATGCGATGTAATGCTCTTATGTA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTAGTACTTAGGCTTTTGACAACTTTATGCGATGTAATGCTCTTATGTA  300

seq1  AAGTATAAAGTACAGTGGATTTGGGTATATTCACAGTTATAGTGCCATCA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGTATAAAGTACAGTGGATTTGGGTATATTCACAGTTATAGTGCCATCA  350

seq1  CCACTGTCAAATTTTAGATTATTTCTATTAGCCCTCAAATAACAACTCAC  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCACTGTCAAATTTTAGATTATTTCTATTAGCCCTCAAATAACAACTCAC  400

seq1  TCTTGTAGAACCACCTGGAATCTAGTGAGAACTGCATTAATCCTTTCTAA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTTGTAGAACCACCTGGAATCTAGTGAGAACTGCATTAATCCTTTCTAA  450

seq1  GGGCAGCGACCCCAGTGACCTAGCCACTTTATACTAGGACCACCTCTTAA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGCAGCGACCCCAGTGACCTAGCCACTTTATACTAGGACCACCTCTTAA  500

seq1  AGGTCCCATTATCTTTATACCACCACACTGAACATAAAATATTTCAACAC  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGTCCCATTATCTTTATACCACCACACTGAACATAAAATATTTCAACAC  550

seq1  ATAAACCTTGAGAGACACAGCCAAATCATATATAAAACCATGGCTTCCAA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATAAACCTTGAGAGACACAGCCAAATCATATATAAAACCATGGCTTCCAA  600

seq1  ATACTCATATGAACTGGGAGCAATTACCATTTTTATGTTTAGAATAGCTA  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATACTCATATGAACTGGGAGCAATTACCATTTTTATGTTTAGAATAGCTA  650

seq1  TTCGATTCGTTAGATTTCACAAGACCAAAATTTCAAACCTTGTAAGATGA  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCGATTCGTTAGATTTCACAAGACCAAAATTTCAAACCTTGTAAGATGA  700

seq1  GTTTGTTTATAATGTCCTGAGAATGAAAATTCTGCATCAAGAATGCTGCT  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTTGTTTATAATGTCCTGAGAATGAAAATTCTGCATCAAGAATGCTGCT  750

seq1  TGTTCCTAAAGCCTATGGCTTATGGAAGTATGCTGCATGAAAATAATAAG  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTTCCTAAAGCCTATGGCTTATGGAAGTATGCTGCATGAAAATAATAAG  800

seq1  CACTGTGCA-TTCATTGTACAGTGGATATCAGACACGAGATAATACAATG  849
      ||||||||| ||||||||||||||||||||||||||||||||||||||||
seq2  CACTGTGCATTTCATTGTACAGTGGATATCAGACACGAGATAATACAATG  850

seq1  AATCTAGACGAGG-TAAAGACAAAGAATGATG-CTTTCATATCGAACAGA  897
      ||||||||||||| |||||||||||||||||| |||||||||||||||||
seq2  AATCTAGACGAGGTTAAAGACAAAGAATGATGTCTTTCATATCGAACAGA  900

seq1  GTCTCCAA-CACCAAATGAACTCAGTGGC-CTTTAAA-GGCTGT-GGTGA  943
      |||||||| |||||||||||||||||||| ||||||| |||||| |||||
seq2  GTCTCCAACCACCAAATGAACTCAGTGGCTCTTTAAAGGGCTGTGGGTGA  950

seq1  CAGATGCCAATGAGGAAG-CA-TAAAGCACAGAAG-AGGTGAAATCAGCA  990
      |||||||||||||||||| || ||||||||||||| ||||||||||||||
seq2  CAGATGCCAATGAGGAAGTCATTAAAGCACAGAAGAAGGTGAAATCAGCA  1000

seq1  GT-CATG-CAAAAG-TCCCAGTG-TTTAGTGATC-TTGAAGGAACAATTG  1035
      || |||| |||||| |||||||| |||||||||| |||||||||||||||
seq2  GTCCATGCCAAAAGTTCCCAGTGTTTTAGTGATCTTTGAAGGAACAATTG  1050

seq1  ATTTT--CTTCAGTAAAA-GAGAGC-AGGATGATTGTT--GGGGAAATAG  1079
      |||||  ||||||||||| |||||| ||||||||||||  ||||||  ||
seq2  ATTTTTCCTTCAGTAAAAGGAGAGCAAGGATGATTGTTTGGGGGAATAAG  1100

seq1  ATGGAAAATCCTCCAGT--CCTTTCCCATTGACTGACAC  1116
      || | ||||||  ||||  ||||| || |||||||||||
seq2  AT-GCAAATCCCTCAGTTCCCTTTTCCCTTGACTGACAC  1138