BAC Information

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BAC

Clone NameB6Ng01-263B02
ChromosomeX (Build37)
Map Location 119,281,923 - 119,423,408
singlet/doubletdoublet
Overlap genenone
Upstream geneLOC385419, EG434907, EG245575, LOC100039544
Downstream geneNap1l3, 3110007F17Rik, LOC100039751
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-263B02.bB6Ng01-263B02.g
ACCGA067328GA067329
length947929
definitionB6Ng01-263B02.b B6Ng01-263B02.g
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(119,422,781 - 119,423,408)(119,281,923 - 119,282,508)
sequence
gaattccacaggaatatccacagagtcaattaacacgaactcctggggga
tcctagagactcagtcaccaaccaaattatgcctaacatgctataactat
ctttcataaaaacacagatgcatacatttaaccaggttataattacatag
aatgatgcaactatcacatgagcaaccatagcgtttataaatattagaaa
atgtggcaatgttccctgagggacacttttgaagtatcctaaaagttaaa
cacaataaccattgaaacttaatttatgttataatacctaataaagaaac
aaaagaaaatagtaatatctgtacaaacacatctttaacaaaataccatg
caaatattattgccgattagaatcttccttttgcaactgatcatgtgtct
ttagctggtatttggaactacctccctctactaagtgttctatatttcct
tcacactcagtaagcacctcatcaggtttggtacttttccttgaggaatg
actcataactgcatccttttagggtatgtttcttttgtaatctggtctaa
tagtgttgttgtagtagctcattttcaaatgacactgttgcatcaaaaca
tgcttaaaggacctcctgaaatcaaaacatactctttcctacctacatta
tggaaaagtaacacaatttccacttggtaatcaggatcaatcgccactgc
tgccactgttatttttttttttctagtcttagcttaaagtgacttttctc
aacctgtgggctacaacccctatggaaaacctcaatatccagaaatatat
ttacattattattcataacagtatcaaaattacagttatagatcatcaat
aaaaatgactttatgtttggggatcacatgaggatctatagtaaagtatg
tcaatgttagaaaggtttagagccactgtctgaaaaggcttcataaa

gaattctcacctgaggaatactgaatggcagagaagcgcctgaaaaaaat
gttcaacatccttaatcatcagggaaatgcaaatcaaaacaaccctgaga
ttccacctcacaccagtcagaatggctaagatcaaaaattcaggagacag
tagttgctggcgagaatgtggagaaagaggaacactcctccattgttgat
gggattgcaagcttgtacaaccactctggaaatcagtctggcggttcctt
agaaaattggacatagtactaccggaggatccagcaatacctctcctggg
catatatccagaagatgtcccaaccggtaagaaggacacatgctccacta
tgttcatagcagccttatttattgtagccagaagctggaaagaacccaga
tgcccctcaacagaggaatggatacagaaattgtggtacatttacacaat
ggagtactactcagctattaaaaagaatgaatttatgaaattcctagcaa
aattggatggacctggagggcatcatcctgagtgaggtaacacaatcaca
aaggaactcacacaataagtactcactgataagtggatattagcccaaaa
cttaggatacgcaagatacaagatacaatttcctaaacacatgaaactca
agaagaatgaagactgaagtgtggacactgtgccccttcttagaattggg
aacaaacacccatggaaggagttacagagacaaagtttggagctgtgaca
aaaggatggaccatctagagactgccatatccagggatccaccccataaa
tcagcttccaaaacgctgacaccattgcacacactaactttaaaaacagt
gaataagcaaatgtgatgaaaacacaaacacacacacacatggagagaga
gagagagagagagagagatgagacagaga
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chrX_119422781_119423408
seq2: B6Ng01-263B02.b_46_673 (reverse)

seq1  GTTTTGATTTCAGGAGGTCCTTTAAGCATGTTTTGATGCAACAGTGTCAT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTTTGATTTCAGGAGGTCCTTTAAGCATGTTTTGATGCAACAGTGTCAT  50

seq1  TTGAAAATGAGCTACTACAACAACACTATTAGACCAGATTACAAAAGAAA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGAAAATGAGCTACTACAACAACACTATTAGACCAGATTACAAAAGAAA  100

seq1  CATACCCTAAAAGGATGCAGTTATGAGTCATTCCTCAAGGAAAAGTACCA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATACCCTAAAAGGATGCAGTTATGAGTCATTCCTCAAGGAAAAGTACCA  150

seq1  AACCTGATGAGGTGCTTACTGAGTGTGAAGGAAATATAGAACACTTAGTA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACCTGATGAGGTGCTTACTGAGTGTGAAGGAAATATAGAACACTTAGTA  200

seq1  GAGGGAGGTAGTTCCAAATACCAGCTAAAGACACATGATCAGTTGCAAAA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGGGAGGTAGTTCCAAATACCAGCTAAAGACACATGATCAGTTGCAAAA  250

seq1  GGAAGATTCTAATCGGCAATAATATTTGCATGGTATTTTGTTAAAGATGT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGAAGATTCTAATCGGCAATAATATTTGCATGGTATTTTGTTAAAGATGT  300

seq1  GTTTGTACAGATATTACTATTTTCTTTTGTTTCTTTATTAGGTATTATAA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTTGTACAGATATTACTATTTTCTTTTGTTTCTTTATTAGGTATTATAA  350

seq1  CATAAATTAAGTTTCAATGGTTATTGTGTTTAACTTTTAGGATACTTCAA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATAAATTAAGTTTCAATGGTTATTGTGTTTAACTTTTAGGATACTTCAA  400

seq1  AAGTGTCCCTCAGGGAACATTGCCACATTTTCTAATATTTATAAACGCTA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGTGTCCCTCAGGGAACATTGCCACATTTTCTAATATTTATAAACGCTA  450

seq1  TGGTTGCTCATGTGATAGTTGCATCATTCTATGTAATTATAACCTGGTTA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGTTGCTCATGTGATAGTTGCATCATTCTATGTAATTATAACCTGGTTA  500

seq1  AATGTATGCATCTGTGTTTTTATGAAAGATAGTTATAGCATGTTAGGCAT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATGTATGCATCTGTGTTTTTATGAAAGATAGTTATAGCATGTTAGGCAT  550

seq1  AATTTGGTTGGTGACTGAGTCTCTAGGATCCCCCAGGAGTTCGTGTTAAT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATTTGGTTGGTGACTGAGTCTCTAGGATCCCCCAGGAGTTCGTGTTAAT  600

seq1  TGACTCTGTGGATATTCCTGTGGAATTC  628
      ||||||||||||||||||||||||||||
seq2  TGACTCTGTGGATATTCCTGTGGAATTC  628


seq1: chrX_119281923_119282508
seq2: B6Ng01-263B02.g_406_995

seq1  ATGCTCCACTATGTTCATAGCAGCCTTATTTATTGTAGCCAGAAGCTGGA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGCTCCACTATGTTCATAGCAGCCTTATTTATTGTAGCCAGAAGCTGGA  50

seq1  AAGAACCCAGATGCCCCTCAACAGAGGAATGGATACAGAAATTGTGGTAC  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGAACCCAGATGCCCCTCAACAGAGGAATGGATACAGAAATTGTGGTAC  100

seq1  ATTTACACAATGGAGTACTACTCAGCTATTAAAAAGAATGAATTTATGAA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTTACACAATGGAGTACTACTCAGCTATTAAAAAGAATGAATTTATGAA  150

seq1  ATTCCTAGCAAAATTGGATGGACCTGGAGGGCATCATCCTGAGTGAGGTA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTCCTAGCAAAATTGGATGGACCTGGAGGGCATCATCCTGAGTGAGGTA  200

seq1  ACACAATCACAAAGGAACTCACACAATAAGTACTCACTGATAAGTGGATA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACACAATCACAAAGGAACTCACACAATAAGTACTCACTGATAAGTGGATA  250

seq1  TTAGCCCAAAACTTAGGATACGCAAGATACAAGATACAATTTCCTAAACA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAGCCCAAAACTTAGGATACGCAAGATACAAGATACAATTTCCTAAACA  300

seq1  CATGAAACTCAAGAAGAATGAAGACTGAAGTGTGGACACTGTGCCCCTTC  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATGAAACTCAAGAAGAATGAAGACTGAAGTGTGGACACTGTGCCCCTTC  350

seq1  TTAGAATTGGGAACAAACACCCATGGAAGGAGTTACAGAGACAAAGTTTG  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAGAATTGGGAACAAACACCCATGGAAGGAGTTACAGAGACAAAGTTTG  400

seq1  GAGCTGTGACAAAAGGATGGACCATCTAGAGACTGCCATATCCAGGGATC  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGCTGTGACAAAAGGATGGACCATCTAGAGACTGCCATATCCAGGGATC  450

seq1  CACCCCAT-AATCAGCTTCC-AAACGCTGACACCATTGCACACACTAACT  498
      |||||||| ||||||||||| |||||||||||||||||||||||||||||
seq2  CACCCCATAAATCAGCTTCCAAAACGCTGACACCATTGCACACACTAACT  500

seq1  TTAAAAACAGTGAATAAGCAAATGTGATG-AAACACAAACACACACACAC  547
      ||||||||||||||||||||||||||||| ||||||||||||||||||||
seq2  TTAAAAACAGTGAATAAGCAAATGTGATGAAAACACAAACACACACACAC  550

seq1  ATGGAGAGAGAGAGAGAGAGAGAGAGAGA-GAGAGAGAGA  586
      ||||||||||||||||||||||||||||| |||| |||||
seq2  ATGGAGAGAGAGAGAGAGAGAGAGAGAGATGAGACAGAGA  590


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