BAC Information

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BAC

Clone NameB6Ng01-263N05
ChromosomeX (Build37)
Map Location 156,965,063 - 157,113,369
singlet/doubletdoublet
Overlap genePhka2, Ppef1
Upstream geneA830080D01Rik, LOC100041359, Sh3kbp1, LOC667524, Pdha1, LOC100041403, LOC100041416, LOC100041427, Gpr64
Downstream geneRs1, Gja6, Scml2, LOC414364, Prkaca-ps1
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-263N05.bB6Ng01-263N05.g
ACCGA067893GA067894
length5411,071
definitionB6Ng01-263N05.b B6Ng01-263N05.g
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(157,112,823 - 157,113,369)(156,965,063 - 156,966,126)
sequence
cacaatatgagaactgaaaagtccttacagagacgttcttgtccttctac
taaaagttaaggttttaatttttcccccatgttaaggatcaaacccgggg
gtttgctcctgctactcaagcactctgtcattgaactatattcaaaatcc
ctatgtcctgctattatggagaaatagaggtccagagagaaatacataat
tttgccaatgaatttctatatggtaccctgcaccccagcttactcagcta
gtcagtgatagggttgcattaaaaataaggtcttctatatttcagattag
acagggtgccatctttgtacttgtctgtccagactaggtagattagacaa
attcattcatttaagggactctacatttgggacatttatttccagatttt
tttttccacatagcactttcggtaaagagaaaaagtcaatatgccaaatc
aacttcatattttagcatgccagctattctaatccttcatattcaaattt
ctgtccacatggtggtggaagtagtggtggttgtgatggta

gaattcaaaataataaacattaagtgtttttcacagtatctggatgtgat
agctaattagtgtagtattattatgattaataatgatgatggtggtgata
gtaatcagttgccatattattaataacaacatcattaaaaaaccttggat
accacttgtattttgtaagaactttgcttgatggtccaataatggtgtca
caaatggcccttttggcaaaatagcattacttttggacagacgtagtagg
cttaattggtccttagtataacaaaaataaattattaagaaatgtaatat
agagttccagaatattaggtttataagaatgtcatttgggagtcactgaa
ttccagaatccaaagatgcatctgatccaacccttttatttgagataaat
cattttgttaaaatacttattttgtgatggggtagaaaagtctcaataat
gtgaacaatcagaatatttatgtagagttgggatctgtcttttgtggaac
attgccagacaacactggcttattggccatgtaggaataattggttttgt
tgaagcaagaaacctacgccttgttactgatgctatcttatttctacaga
acgtagtgaagctgatgcgaggtcttctccagtgtatgatgaggcaggta
ggtgaaatgtgacaaacttggacctacagaaaattaaaagtgacatttgt
gtcattttaattgggatagcatgcatgtttacattctgaactttctcaag
aagaaaaccacaatattttgcttaatttctctttttaaaattatcctcaa
taatttttatgctatataaccatagtctcaaaggacaattttctttcaaa
gaccctctttcagagatcctatgtgtataaaagaggacatgtcttttttt
aatttaagaaaagcaatatttaaaaccactcagaaaggccgtgcgctact
tcttacttcttctgtgtgtttttctttcagattgaagcctcttgagcttt
acacgaatgtcatttatggaatgagttagtggtattggcaccctattacc
cagcctgaaggccagaagttc
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chrX_157112823_157113369
seq2: B6Ng01-263N05.b_46_592 (reverse)

seq1  TACCATCACAACCACCACTACTTCCACCACCATGTGGACAGAAATTTGAA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACCATCACAACCACCACTACTTCCACCACCATGTGGACAGAAATTTGAA  50

seq1  TATGAAGGATTAGAATAGCTGGCATGCTAAAATATGAAGTTGATTTGGCA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATGAAGGATTAGAATAGCTGGCATGCTAAAATATGAAGTTGATTTGGCA  100

seq1  TATTGACTTTTTCTCTTTACCGAAAGTGCTATGTGGAAAAAAAAATCTGG  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATTGACTTTTTCTCTTTACCGAAAGTGCTATGTGGAAAAAAAAATCTGG  150

seq1  AAATAAATGTCCCAAATGTAGAGTCCCTTAAATGAATGAATTTGTCTAAT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAATAAATGTCCCAAATGTAGAGTCCCTTAAATGAATGAATTTGTCTAAT  200

seq1  CTACCTAGTCTGGACAGACAAGTACAAAGATGGCACCCTGTCTAATCTGA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTACCTAGTCTGGACAGACAAGTACAAAGATGGCACCCTGTCTAATCTGA  250

seq1  AATATAGAAGACCTTATTTTTAATGCAACCCTATCACTGACTAGCTGAGT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATATAGAAGACCTTATTTTTAATGCAACCCTATCACTGACTAGCTGAGT  300

seq1  AAGCTGGGGTGCAGGGTACCATATAGAAATTCATTGGCAAAATTATGTAT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGCTGGGGTGCAGGGTACCATATAGAAATTCATTGGCAAAATTATGTAT  350

seq1  TTCTCTCTGGACCTCTATTTCTCCATAATAGCAGGACATAGGGATTTTGA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCTCTCTGGACCTCTATTTCTCCATAATAGCAGGACATAGGGATTTTGA  400

seq1  ATATAGTTCAATGACAGAGTGCTTGAGTAGCAGGAGCAAACCCCCGGGTT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATATAGTTCAATGACAGAGTGCTTGAGTAGCAGGAGCAAACCCCCGGGTT  450

seq1  TGATCCTTAACATGGGGGAAAAATTAAAACCTTAACTTTTAGTAGAAGGA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGATCCTTAACATGGGGGAAAAATTAAAACCTTAACTTTTAGTAGAAGGA  500

seq1  CAAGAACGTCTCTGTAAGGACTTTTCAGTTCTCATATTGTGGAATTC  547
      |||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAGAACGTCTCTGTAAGGACTTTTCAGTTCTCATATTGTGGAATTC  547


seq1: chrX_156965063_156966126
seq2: B6Ng01-263N05.g_65_1135

seq1  GAATTCAAAATAATAAACATTAAGTGTTTTTCACAGTATCTGGATGTGAT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCAAAATAATAAACATTAAGTGTTTTTCACAGTATCTGGATGTGAT  50

seq1  AGCTAATTAGTGTAGTATTATTATGATTAATAATGATGATGGTGGTGATA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCTAATTAGTGTAGTATTATTATGATTAATAATGATGATGGTGGTGATA  100

seq1  GTAATCAGTTGCCATATTATTAATAACAACATCATTAAAAAACCTTGGAT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTAATCAGTTGCCATATTATTAATAACAACATCATTAAAAAACCTTGGAT  150

seq1  ACCACTTGTATTTTGTAAGAACTTTGCTTGATGGTCCAATAATGGTGTCA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCACTTGTATTTTGTAAGAACTTTGCTTGATGGTCCAATAATGGTGTCA  200

seq1  CAAATGGCCCTTTTGGCAAAATAGCATTACTTTTGGACAGACGTAGTAGG  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAATGGCCCTTTTGGCAAAATAGCATTACTTTTGGACAGACGTAGTAGG  250

seq1  CTTAATTGGTCCTTAGTATAACAAAAATAAATTATTAAGAAATGTAATAT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTAATTGGTCCTTAGTATAACAAAAATAAATTATTAAGAAATGTAATAT  300

seq1  AGAGTTCCAGAATATTAGGTTTATAAGAATGTCATTTGGGAGTCACTGAA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAGTTCCAGAATATTAGGTTTATAAGAATGTCATTTGGGAGTCACTGAA  350

seq1  TTCCAGAATCCAAAGATGCATCTGATCCAACCCTTTTATTTGAGATAAAT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCCAGAATCCAAAGATGCATCTGATCCAACCCTTTTATTTGAGATAAAT  400

seq1  CATTTTGTTAAAATACTTATTTTGTGATGGGGTAGAAAAGTCTCAATAAT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATTTTGTTAAAATACTTATTTTGTGATGGGGTAGAAAAGTCTCAATAAT  450

seq1  GTGAACAATCAGAATATTTATGTAGAGTTGGGATCTGTCTTTTGTGGAAC  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGAACAATCAGAATATTTATGTAGAGTTGGGATCTGTCTTTTGTGGAAC  500

seq1  ATTGCCAGACAACACTGGCTTATTGGCCATGTAGGAATAATTGGTTTTGT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTGCCAGACAACACTGGCTTATTGGCCATGTAGGAATAATTGGTTTTGT  550

seq1  TGAAGCAAGAAACCTACGCCTTGTTACTGATGCTATCTTATTTCTACAGA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAAGCAAGAAACCTACGCCTTGTTACTGATGCTATCTTATTTCTACAGA  600

seq1  ACGTAGTGAAGCTGATGCGAGGTCTTCTCCAGTGTATGATGAGGCAGGTA  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACGTAGTGAAGCTGATGCGAGGTCTTCTCCAGTGTATGATGAGGCAGGTA  650

seq1  GGTGAAATGTGACAAACTTGGACCTACAGAAAATT-AAAGTGACATTTGT  699
      ||||||||||||||||||||||||||||||||||| ||||||||||||||
seq2  GGTGAAATGTGACAAACTTGGACCTACAGAAAATTAAAAGTGACATTTGT  700

seq1  GTCATTTTAATTGGGATAGCATGCATG-TTACATTCTGAACTTTCTCAAG  748
      ||||||||||||||||||||||||||| ||||||||||||||||||||||
seq2  GTCATTTTAATTGGGATAGCATGCATGTTTACATTCTGAACTTTCTCAAG  750

seq1  AAGAAAACCACAATATTTTGCTTAATTTCTCTTTTTAAAATTATCCTCAA  798
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGAAAACCACAATATTTTGCTTAATTTCTCTTTTTAAAATTATCCTCAA  800

seq1  TAATTTTTATGCTATATAACCATAGTCTCAAAGGACAA-TTTCTTTCAAA  847
      |||||||||||||||||||||||||||||||||||||| |||||||||||
seq2  TAATTTTTATGCTATATAACCATAGTCTCAAAGGACAATTTTCTTTCAAA  850

seq1  GACCCTCTTTCAGAGAT-CTATGTGTATAAAAGAGGACATGTCTTTTTTT  896
      ||||||||||||||||| ||||||||||||||||||||||||| ||||||
seq2  GACCCTCTTTCAGAGATCCTATGTGTATAAAAGAGGACATGTC-TTTTTT  899

seq1  TTAATTAAGAAAAGCAATA-TTAAAACCACTCAGAAA-GCCGTGCGCTAC  944
      | | ||||||||||||||| ||||||||||||||||| ||||||||||||
seq2  TAATTTAAGAAAAGCAATATTTAAAACCACTCAGAAAGGCCGTGCGCTAC  949

seq1  TTCTTACTTCTTCTGTGTGTTTTTCCTTCAGATTGA--GCTCTTGAGCTT  992
      ||||||||||||||||||||||||| ||||||||||   ||||||||| |
seq2  TTCTTACTTCTTCTGTGTGTTTTTCTTTCAGATTGAAGCCTCTTGAGC-T  998

seq1  TTACA-GAATGTCATTATTGGGAATGAGTTAGTGGGTAATGGCACCC-AT  1040
      ||||| |||||||||| |  ||||||||||||| |||| |||||||| ||
seq2  TTACACGAATGTCATT-TATGGAATGAGTTAGT-GGTATTGGCACCCTAT  1046

seq1  TACCAAGCCTGAAGGCCAG-AGTTC  1064
      |||| |||||||||||||| |||||
seq2  TACCCAGCCTGAAGGCCAGAAGTTC  1071


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