MoG+ -Mouse Genome database with high added value-

BAC Information

BAC name
Region	Chromosome -
Gene	search by nearby gene name.
Format	rows / page	Page	1

BAC

Clone Name	B6Ng01-264F08
Chromosome	X (Build37)
Map Location	89,528,146 - 89,638,323
singlet/doublet	doublet
Overlap gene	Mageb18
Upstream gene	LOC667972, LOC667976, Mageb2, EG278167, EG667988, EG667993, EG385489, 1700084M14Rik, EG236891, LOC629542, Mageb5, LOC673766, LOC633484, LOC674396, EG278087, Mageb1, EG236892, EG236893, EG436259, EG668061
Downstream gene	EG546347, LOC629568, LOC100042663, Rp23-438h3.2, Arx, Pola1
Link	Open Mouse BAC browser

Click to get alignment info.

name	LOC667972 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:667972
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 7 Proteins pseudo : _no_value

name	LOC667976 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:667976
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 33 Proteins pseudo : _no_value

name	Mageb2 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:17146 MGI:105117
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	EG278167 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:278167 MGI:3643982
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 mRNA, 22 Proteins

name	EG667988 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:667988 MGI:3646464
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 mRNA, 22 Proteins

name	EG667993 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:667993 MGI:3643555
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 32 Proteins pseudo : _no_value

name	EG385489 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:385489 MGI:3648366
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 2 Proteins pseudo : _no_value

name	1700084M14Rik (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:73487 MGI:1920737
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 2 mRNAs, 10 ESTs, 1 Protein

name	EG236891 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:236891 MGI:3643138
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 43 Proteins

name	LOC629542 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:629542
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 3 mRNAs, 8 ESTs, 12 Proteins

name	Mageb5 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:74271 MGI:2148169
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 3 mRNAs, 8 ESTs, 13 Proteins

name	LOC673766 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:673766
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 2 Proteins pseudo : _no_value

name	LOC633484 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:633484
definition	note : melanoma antigen, family B pseudogene pseudo : _no_value

name	LOC674396 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:674396
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 7 Proteins pseudo : _no_value

name	EG278087 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:278087 MGI:3645128
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Mageb1 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:17145 MGI:105118
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	EG236892 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:236892 MGI:3643139
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 42 Proteins

name	EG236893 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:236893 MGI:3643140
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 14 Proteins

name	Mageb18 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:215641 MGI:3045344
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	EG436259 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:436259 MGI:3648071
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 10 Proteins pseudo : _no_value

name	EG668061 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:668061 MGI:3645921
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 EST, 1 Protein

name	EG546347 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:546347 MGI:3646197
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	LOC629568 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:629568
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 3 Proteins pseudo : _no_value

name	LOC100042663 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:100042663
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 2 mRNAs, 18 ESTs, 1 Protein pseudo : _no_value

name	Rp23-438h3.2 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:69357
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Arx (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:11878 MGI:1097716
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Pola1 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:18968 MGI:99660
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Mageb2 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:13624318 GeneID:17146 MGI:105117
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : melanoma antigen, family B, 2 transcript_id : NM_031171.1

name	EG278167 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:25030909 GeneID:278167 MGI:3643982
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 mRNA, 22 Proteins product : predicted gene, EG278167 transcript_id : XM_205261.1

name	EG667988 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:94407637 GeneID:667988 MGI:3646464
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 mRNA, 22 Proteins product : predicted gene, EG667988 transcript_id : XM_993696.1

name	EG236891 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:38087231 GeneID:236891 MGI:3643138
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 43 Proteins product : predicted gene, EG236891 transcript_id : XM_141933.2

name	LOC629542 (CDS detail)
type	mRNA
link	vega ensembl NCBI
xref	GI:94407643 GeneID:629542
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 3 mRNAs, 8 ESTs, 12 Proteins product : similar to Melanoma antigen, family B, 5 transcript_id : XM_204404.3

name	Mageb5 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:94407644 GeneID:74271 MGI:2148169
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 3 mRNAs, 8 ESTs, 13 Proteins product : melanoma antigen, family B, 5 transcript_id : XM_284719.3

name	EG278087 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:136255945 GeneID:278087 MGI:3645128
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : predicted gene, EG278087 transcript_id : NM_001083629.1

name	Mageb1 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:8659569 GeneID:17145 MGI:105118
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : melanoma antigen, family B, 1 transcript_id : NM_010759.1

name	EG236892 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:94407645 GeneID:236892 MGI:3643139
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 42 Proteins product : predicted gene, EG236892 transcript_id : XM_141934.2

name	EG236893 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:20984657 GeneID:236893 MGI:3643140
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 14 Proteins product : predicted gene, EG236893 transcript_id : XM_141935.1

name	Mageb18 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:142372036 GeneID:215641 MGI:3045344
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : melanoma antigen family B, 18 transcript_id : NM_173783.3

name	EG668061 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:94407648 GeneID:668061 MGI:3645921
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 EST, 1 Protein product : predicted gene, EG668061 transcript_id : XM_994015.1

name	EG546347 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:77539459 GeneID:546347 MGI:3646197
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : predicted gene, EG546347 transcript_id : NM_001034103.1

name	Rp23-438h3.2 (CDS detail)
type	mRNA
link	vega ensembl NCBI
xref	GI:50356001 GeneID:69357
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : hypothetical protein LOC69357 transcript_id : NM_183280.2

name	Arx (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:31982501 GeneID:11878 MGI:1097716
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : aristaless related homeobox gene (Drosophila) transcript_id : NM_007492.3

name	Pola1 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:6679408 GeneID:18968 MGI:99660
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : polymerase (DNA directed), alpha 1 transcript_id : NM_008892.1

name	Mageb2 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:13624319 GeneID:17146 MGI:105117
definition	codon_start : 1 product : melanoma antigen, family B, 2 protein_id : NP_112448.1

name	EG278167 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:25030910 GeneID:278167 MGI:3643982
definition	codon_start : 1 product : similar to putative novel member of the melanoma antigen, family B (Mageb) gene family protein_id : XP_205261.1

name	EG667988 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:94407638 GeneID:667988 MGI:3646464
definition	codon_start : 1 product : similar to putative novel member of the melanoma antigen, family B (Mageb) gene family protein_id : XP_998790.1

name	EG236891 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:38087232 GeneID:236891 MGI:3643138
definition	codon_start : 1 product : similar to putative novel member of the melanoma antigen, family B (Mageb) gene family protein_id : XP_141933.2

name	LOC629542 (CDS detail)
type	CDS
link	vega ensembl NCBI
xref	GI:25030920 GeneID:629542
definition	codon_start : 1 product : hypothetical protein protein_id : XP_204404.1

name	Mageb5 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:28528822 GeneID:74271 MGI:2148169
definition	codon_start : 1 product : melanoma antigen, family B, 5 protein_id : XP_284719.1

name	EG278087 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:136255946 GeneID:278087 MGI:3645128
definition	codon_start : 1 note : melanoma antigen, family B, 2 product : predicted gene, EG278087 protein_id : NP_001077098.1

name	Mageb1 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:8659570 CCDS:CCDS30267.1 GeneID:17145 MGI:105118
definition	codon_start : 1 product : melanoma antigen, family B, 1 protein_id : NP_034889.1

name	EG236892 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:94407646 GeneID:236892 MGI:3643139
definition	codon_start : 1 product : similar to MAGE-B3 protein_id : XP_141934.2

name	EG236893 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:20984658 GeneID:236893 MGI:3643140
definition	codon_start : 1 product : similar to melanoma antigen, family B, 1 protein_id : XP_141935.1

name	Mageb18 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:30424659 CCDS:CCDS30268.1 GeneID:215641 MGI:3045344
definition	codon_start : 1 product : melanoma antigen family B, 18 protein_id : NP_776144.1

name	EG668061 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:94407649 GeneID:668061 MGI:3645921
definition	codon_start : 1 product : similar to Predicted gene, EG546347 protein_id : XP_999109.1

name	EG546347 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:77539460 GeneID:546347 MGI:3646197
definition	codon_start : 1 product : hypothetical protein LOC546347 protein_id : NP_001029275.1

name	Rp23-438h3.2 (CDS detail)
type	CDS
link	vega ensembl NCBI
xref	GI:46518547 GeneID:69357
definition	codon_start : 1 product : hypothetical protein LOC69357 protein_id : NP_899103.1

name	Arx (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:26024213 CCDS:CCDS30271.1 GeneID:11878 MGI:1097716
definition	GO_component : GO:0005634 - nucleus [Evidence IEA]; GO:0005667 - transcription factor complex [Evidence IEA] GO_function : GO:0003677 - DNA binding [Evidence IEA]; GO:0043565 - sequence-specific DNA binding [Evidence IEA]; GO:0003700 - transcription factor activity [Evidence IEA] GO_process : GO:0007275 - development [Evidence IEA]; GO:0030900 - forebrain development [Evidence IMP]; GO:0001764 - neuron migration [Evidence IMP]; GO:0042127 - regulation of cell proliferation [Evidence IMP]; GO:0045449 - regulation of transcription [Evidence IEA]; GO:0006355 - regulation of transcription, DNA-dependent [Evidence IEA]; GO:0006350 - transcription [Evidence IEA] codon_start : 1 product : aristaless related homeobox gene protein_id : NP_031518.2

name	Pola1 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:6679409 CCDS:CCDS30272.1 GeneID:18968 MGI:99660
definition	GO_component : GO:0005658 - alpha DNA polymerase:primase complex [Evidence IDA] [Evidence ISS]; GO:0000785 - chromatin [Evidence ISS]; GO:0005635 - nuclear envelope [Evidence ISS]; GO:0005730 - nucleolus [Evidence ISS]; GO:0005654 - nucleoplasm [Evidence ISS]; GO:0005634 - nucleus [Evidence ISS] [Evidence IDA] GO_function : GO:0008408 - 3'-5' exonuclease activity [Evidence IEA]; GO:0003889 - alpha DNA polymerase activity [Evidence ISS]; GO:0003682 - chromatin binding [Evidence ISS]; GO:0003677 - DNA binding [Evidence ISS] [Evidence IEA]; GO:0003896 - DNA primase activity [Evidence ISS]; GO:0003887 - DNA-directed DNA polymerase activity [Evidence IDA]; GO:0046872 - metal ion binding [Evidence IEA]; GO:0000166 - nucleotide binding [Evidence ISS] [Evidence IEA]; GO:0016779 - nucleotidyltransferase activity [Evidence IEA]; GO:0005515 - protein binding [Evidence ISS]; GO:0046982 - protein heterodimerization activity [Evidence IPI]; GO:0005529 - sugar binding [Evidence ISS]; GO:0016740 - transferase activity [Evidence IEA]; GO:0008270 - zinc ion binding [Evidence IEA] GO_process : GO:0008283 - cell proliferation [Evidence ISS]; GO:0006260 - DNA replication [Evidence IDA] [Evidence IMP]; GO:0006270 - DNA replication initiation [Evidence ISS]; GO:0000731 - DNA synthesis during DNA repair [Evidence ISS]; GO:0006303 - double-strand break repair via nonhomologous end joining [Evidence ISS]; GO:0006273 - lagging strand elongation [Evidence ISS]; GO:0006272 - leading strand elongation [Evidence ISS]; GO:0009268 - response to pH [Evidence ISS]; GO:0009615 - response to virus [Evidence ISS]; GO:0000084 - S phase of mitotic cell cycle [Evidence ISS] codon_start : 1 note : DNA polymerase alpha 1, 180 kDa; G7a/Bat6Hom product : polymerase (DNA directed), alpha 1 protein_id : NP_032918.1

name	LOC667972 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:667972
definition	number : 4 pseudo : _no_value

name	LOC667976 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:667976
definition	number : 3 pseudo : _no_value

name	LOC667976 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:667976
definition	number : 2 pseudo : _no_value

name	LOC667976 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:667976
definition	number : 1 pseudo : _no_value

name	EG667993 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:667993
definition	number : 2 pseudo : _no_value

name	EG667993 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:667993
definition	number : 1 pseudo : _no_value

name	EG385489 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:385489
definition	number : 1 pseudo : _no_value

name	LOC673766 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:673766
definition	number : 1 pseudo : _no_value

name	LOC674396 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:674396
definition	number : 2 pseudo : _no_value

name	LOC674396 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:674396
definition	number : 1 pseudo : _no_value

name	EG436259 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:436259
definition	number : 2 pseudo : _no_value

name	EG436259 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:436259
definition	number : 1 pseudo : _no_value

name	LOC629568 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:629568
definition	number : 1 pseudo : _no_value

name	LOC629568 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:629568
definition	number : 2 pseudo : _no_value

name	1700084M14Rik (CDS detail)
type	misc_RNA
link	vega ensembl MGI NCBI
xref	GI:149271818 GeneID:73487 MGI:1920737
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 2 mRNAs, 10 ESTs, 1 Protein product : RIKEN cDNA 1700084M14 gene transcript_id : XR_001621.2

name	LOC100042663 (CDS detail)
type	misc_RNA
link	vega ensembl NCBI
xref	GI:149271822 GeneID:100042663
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 2 mRNAs, 18 ESTs, 1 Protein product : hypothetical protein LOC100042663 pseudo : _no_value transcript_id : XR_033643.1

clone name	MSMg01-425F10
singlet/doublet	singlet
plural/unique	plural

clone name	MSMg01-502I13
singlet/doublet	singlet
plural/unique	plural

clone name	MSMg01-150J20
singlet/doublet	singlet
plural/unique	plural

clone name	MSMg01-534F17
singlet/doublet	singlet
plural/unique	plural

clone name	MSMg01-209A05
singlet/doublet	singlet
plural/unique	plural

clone name	MSMg01-425F10
singlet/doublet	singlet
plural/unique	plural

clone name	MSMg01-343O14
singlet/doublet	singlet
plural/unique	plural

clone name	MSMg01-457M24
singlet/doublet	singlet
plural/unique	plural

clone name	MSMg01-184D09
singlet/doublet	doublet
plural/unique	plural

clone name	MSMg01-115I09
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-211D20
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-261A01
singlet/doublet	singlet
plural/unique	plural

clone name	MSMg01-361P11
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-354L03
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-205K05
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-092H13
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-407L15
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-397M17
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-267F10
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-183G09
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-323C06
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-164N07
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-089A14
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-148G24
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-124P20
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-055D02
singlet/doublet	singlet
plural/unique	plural

clone name	MSMg01-294N10
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-178C24
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-147K24
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-507G03
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-387B17
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-404G03
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-182F01
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-124K06
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-068M16
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-084H24
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-415F04
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-420E18
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-309E11
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-280D08
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-111L21
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-031J02
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-308A21
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-036L14
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-238B10
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-298E24
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-116G15
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-011E06
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-198H23
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-151F24
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-215B20
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-113D08
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-113D08
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-064F20
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-216H16
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-168I02
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-217F23
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-256E09
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-238L08
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-019O03
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-177O17
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-262B20
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-236F01
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-122J06
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-173G10
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-343M11
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-084K12
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-298D13
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-264F08
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-064E15
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-004O05
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-044D06
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-332F01
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-017D23
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-063P19
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-311F03
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-134I21
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-293M13
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-071D02
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-289F16
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-084O16
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-117P08
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-197F16
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-022K12
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-132M13
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-027M21
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-018I23
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-163P02
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-267L06
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-105E02
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-192I12
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-319P20
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-095P13
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-069A18
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-283L14
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-062O19
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-048M14
singlet/doublet	singlet
plural/unique	unique

BAC End Information

BAC end	BAC-end 1	BAC-end 2
end name	B6Ng01-264F08.b	B6Ng01-264F08.g
ACC	GA068264	GA068265
length	1,138	1,161
definition	B6Ng01-264F08.b	B6Ng01-264F08.g
singlet/doublet	doublet	doublet
BLAST hit	unique	unique
Map location.	(89,528,146 - 89,529,160)	(89,637,152 - 89,638,323)
sequence	gaattctcaactgaggaataccaaatgtttgagaagcacctaaaacatgt tcaacatcttaataatcagggaaatgcaaatcaaaacaaccctgagattc tacctcacaccagtcagaatggctaaaataaaaaattcaggtgacagcag atgctggtgaggatgtggagaaagagaaacactcttccattgctcgtgga attgcaagctgctacaaccactctggacatcagtttggcggttcctcaga aaattggacatagtactacctgaggacccagctataccactcctgggcat atacccaaaagatgctccaacatataacaaggacacatgctctactatgt tcatagcagccgtaattataatagccagaagctagaaagaacccagatgt ctctcaacagaggaatggatacagaaaatgtagtacatttacacaatggt gtactactcagcaattaaaaacaatgagtttatgaaattcttagacaaat ggatggatctggaggatatcattctgagtgaggtaacctgagagttttaa gatgaaataaaccctttgttccccaagttcctcttggtcatagcatgttt tcacagcaatagaaacctaactaagacaggtcatgtcatagttccctgaa ttatttttaaaattatttattcactttttatcccaatattagccatgctt tcctcccagtaaccccacaggcaaaaccctcctccattctacctttccct tatcatttgagaatggaaatccccaatctaggtctatctttgtctctcta tttctctctctctgtctctctctctctctctctctctctctctctcacac acacacacacacacacacacacacacacacacacacttacacataaacac acacacacacacacacacatacatacatacactctaccctacccctcact ctgaacatcaagtcactgaaaggactaggcacatccttttcccactgaga ctagaccagtgtcccagttaggggaacagcatccacagcaagtaacaacc tccagttgttgcgtacccacctgaagaccagcctggatacatgcatcata atttgtgcatgaaagataactttattttagttttctga	gaattcctgacattggcccagttgaatgtataatagatgggcacatatag aatatataggcttcagtcctttctatctcagtcttaacttagccagattc taagtgtctttatggaaccaagtatgggctctccatgtagacaaacatat tttaaactatccttattatctgactttgccatcatatttgagcagctata gatatgatgaattggatggaaacaatagagaatttaaatcaaatattgga atgacagctacaagcagcaatttataacatattgctttaaaatgtagtgt gttttgcctttctagagtattggattattgctcagcataaaataaccatt ttgtgagatatattttaaagtttttgatttgttttcatgtttttgaatca atgtcttgctatgtagcccaagatgtcacaaaattttctatgtagtccag gttgatataaaatttgtaattctctagcctcagtttcctttctgatatat atgtatgtatttatgcattatatatgtatagaatatgtatatatacatat ataagtgagatttgatcttttatgtaattgatttaatttgacatgtttat taagcaactagagcagttatttttatggaaagtctatcttcttaacattc tttaagccgttactactaactaaatttttgattgtcaacattagcatctc tttgatagcttctaaaaaatgatttatttatttatttatctatgtatatg agcacaccatagttatcttcagacataccagaagagggcatcagatccca ttacagatggttgtgagccactatgtggttgctgggaattaaactcagga cctctggaagagcagttagtgctcttaaccgctgagccatctctccaacc ctctttggtagctttttaaatatagcaatttaaagatcttactcaaggaa aatgttataattaattaatagaactgggcatcaatattttctctatttcc tctggttatttcatgtactggacccagaagtgataatacttctctttcat ttgtatttctacacatactgctgagattcagttagatttagaataactat catatgcctgtttcatgtgtaagcctctcattagccatgagtaaaggatc tgatttttttt
quality values	Open. Hide. 58 31 35 31 62 62 62 41 29 54 62 62 62 54 49 62 49 39 42 62 47 44 44 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 59 62 59 62 62 62 62 59 59 62 62 62 62 59 62 62 62 59 62 62 62 54 62 62 62 62 62 62 59 59 62 62 59 59 62 62 59 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 59 54 54 54 62 62 62 62 62 62 62 62 62 62 62 62 62 59 59 62 59 62 62 62 62 62 62 62 62 62 59 62 62 62 62 62 62 62 62 62 62 62 62 62 62 59 62 62 54 62 59 62 62 62 62 62 62 59 62 62 62 62 62 62 62 62 54 59 62 59 59 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 59 62 62 62 62 62 62 59 62 62 62 62 62 62 62 62 62 62 59 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 59 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 59 59 62 59 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 54 62 62 59 59 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 59 62 62 62 62 62 62 62 62 62 62 62 62 59 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 59 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 49 43 59 62 62 62 62 62 62 59 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 49 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 54 62 62 62 54 54 62 62 62 62 62 43 62 47 47 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 54 54 62 62 62 62 62 62 62 62 62 62 43 62 62 62 62 62 62 62 62 62 62 49 58 58 58 58 58 54 58 58 58 58 58 58 58 58 58 58 58 58 58 58 54 58 58 54 58 54 54 58 58 58 58 58 58 58 58 58 58 54 46 58 47 58 58 54 54 58 58 58 58 58 58 52 41 58 58 54 58 51 47 58 53 46 46 51 58 58 54 53 53 58 58 58 58 51 54 58 53 58 58 53 58 43 50 58 58 58 39 51 53 53 58 58 58 33 54 58 58 49 49 58 53 52 58 58 50 51 58 51 42 58 53 58 58 58 43 50 50 50 58 40 41 51 54 50 38 41 53 42 51 44 43 50 58 51 58 58 42 44 54 52 49 38 31 34 52 49 49 40 44 28 28 44 52 52 42 33 54 38 32 54 54 39 42 54 54 49 40 54 46 45 45 30 51 52 45 37 40 39 51 35 44 35 31 51 38 32 46 42 39 45 39 45 54 51 41 52 32 53 53 32 40 46 38 49 40 32 32 46 46 32 32 47 40 52 33 53 25 49 30 53 29 40 31 51 22 16 16 41 27 38 23 46 34 51 26 51 31 51 31 51 30 51 45 46 31 51 30 51 23 46 27 30 46 31 33 28 23 26 33 30 37 46 43 42 43 46 32 33 32 26 42 42 41 42 42 41 41 43 46 46 31 31 46 18 46 30 46 22 46 31 31 17 20 25 29 26 19 17 23 29 31 16 29 23 25 14 17 17 29 18 29 16 23 22 29 29 31 29 29 13 19 20 26 44 29 35 11 36 32 42 19 44 31 29 16 36 29 38 27 29 19 31 21 38 20 30 20 31 16 36 17 44 22 36 18 31 15 31 15 34 24 37 18 31 18 34 14 29 28 17 16 30 30 37 31 21 14 15 26 25 14 18 20 20 18 30 23 30 32 38 25 16 14 18 27 14 22 32 8 6 10 16 32 28 13 40 7 21 11 28 20 28 23 15 21 6 6 6 14 25 12 24 15 33 38 15 14 28 15 8 6 14 26 28 7 28 20 28 28 18 12 9 8 7 5 3 4 8 16 30 27 14 8 14 15 27 25 30 28 15 9 9 18 17 20 21 15 15 23 17 5 2 3 12 8 11 14 6 7 21 16 14 5 11 14 7 18 5 21 8 18 18 11 13 16 14 19 6 12 13 7 21 28 10 10 12 20 7 6 12 11 8 11 7 11 18 8 15 9 11 8 5 9 13 4 9 6 19 16 16 15 21 20 17 5 7 11 3 12 12 10 4 6 12 12 3 4 11 5 4 4 4 5 6 22 2 3 13 4 6 17 17 17 22 12 4 3 26 25 9 7 7 5 3	Open. Hide. 62 47 56 47 62 62 62 62 62 59 59 62 62 62 62 59 62 62 59 59 62 62 62 62 59 49 37 62 62 62 62 62 62 62 59 62 59 59 62 62 62 62 62 62 59 62 62 62 62 62 62 54 54 62 62 62 62 59 62 62 62 62 62 62 59 62 59 62 62 49 49 54 62 59 62 62 62 62 62 59 62 59 62 62 62 62 62 62 62 62 62 62 62 59 59 62 62 62 62 62 59 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 59 62 62 62 62 62 62 54 54 62 62 62 59 62 59 59 62 62 59 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 59 59 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 59 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 59 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 59 59 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 59 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 43 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 52 58 58 58 58 58 58 58 58 58 58 58 58 58 58 58 58 58 58 58 58 58 58 58 58 58 58 58 58 58 58 58 58 58 58 58 58 58 58 58 58 58 58 58 58 58 58 58 58 58 58 58 58 58 58 58 58 58 58 58 58 58 58 58 45 41 58 58 58 51 51 58 58 58 58 58 51 58 58 51 50 58 44 58 58 58 42 58 51 49 58 58 58 58 58 58 58 54 58 58 58 58 46 58 46 49 51 58 53 53 53 50 58 58 49 54 58 51 58 58 48 51 58 53 41 58 58 58 49 50 51 58 58 52 58 58 51 53 58 58 54 54 51 58 58 51 58 50 40 43 43 52 51 58 53 58 58 50 50 51 50 50 58 51 38 54 40 51 52 50 49 41 39 58 50 49 40 54 54 50 54 54 54 54 54 51 32 51 54 40 38 26 44 50 40 51 49 45 53 51 40 45 53 51 53 52 54 49 52 42 39 38 39 52 51 53 53 40 42 54 54 54 54 37 37 53 40 32 54 44 52 45 54 47 52 45 54 44 37 52 54 31 33 47 38 37 40 53 54 53 37 52 52 35 40 40 24 52 31 47 31 31 40 32 42 53 32 36 47 32 32 42 53 40 45 31 34 35 27 31 47 33 21 27 27 24 53 53 36 51 15 47 40 32 31 43 38 31 17 40 25 29 51 40 30 30 33 35 32 23 25 31 24 26 46 22 43 42 25 31 33 25 33 33 31 31 31 31 30 42 32 31 43 25 34 30 29 36 42 47 31 42 43 33 33 23 47 41 30 30 30 18 27 24 32 16 25 27 31 31 37 31 31 42 25 41 19 31 28 27 32 31 31 31 24 30 25 31 31 33 37 21 33 20 44 30 30 34 32 39 9 31 31 18 31 31 31 31 29 14 29 12 25 25 33 24 30 33 31 47 29 38 38 27 31 31 33 38 48 48 48 32 31 44 16 14 16 17 25 27 21 6 19 17 47 31 19 48 37 31 20 23 27 21 26 20 16 21 17 15 11 25 16 24 21 30 15 27 37 29 8 8 16 12 19 6 17 8 19 15 13 17 9 13 30 25 21 10 8 16 5 40 32 32 23 29 21 22 7 17 16 30 48 48 32 32 18 9 9 16 9 34 21 27 28 13 10 15 21 22 14 8 19 16 34 26 16 16 4 10 10 24 28 20 15 9 3 6 34 10 5 5 13 18 10 5 11 15 7 5 3 3 5 13 21 24 24 20 21 8 38 21 13 10 17 34 12 28 11 25 6 22 21 11 4 3 7 5 15 5 9 9 21 8 25 17 17 13 16 5 15 17 13 20 20 5 5 7 6 6 18 15 23 8 14 5 5 19 8 16 17 4 16 8 5 22 7 3 3 7 23 5 10 9 3 1 3 4 8 22 4 9 4 5 4 15 11 16 18 5 16 7 3 2 2 3 6 14 4 6 10 10 9 7 2 4 15 2 9 7 2 3 6 6 7 1 2 5 1 20 17 18 19 22 14 1

Alignment Information

BAC End 1

BAC End 2

seq1: chrX_89528146_89529160
seq2: B6Ng01-264F08.b_174_1181

seq1  AAAAATTCAGGTGACAGCAGATGCTGGTGAGGATGTGGAGAAAGAGAAAC  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAAATTCAGGTGACAGCAGATGCTGGTGAGGATGTGGAGAAAGAGAAAC  50

seq1  ACTCTTCCATTGCTCGTGGAATTGCAAGCTGCTACAACCACTCTGGACAT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTCTTCCATTGCTCGTGGAATTGCAAGCTGCTACAACCACTCTGGACAT  100

seq1  CAGTTTGGCGGTTCCTCAGAAAATTGGACATAGTACTACCTGAGGACCCA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGTTTGGCGGTTCCTCAGAAAATTGGACATAGTACTACCTGAGGACCCA  150

seq1  GCTATACCACTCCTGGGCATATACCCAAAAGATGCTCCAACATATAACAA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTATACCACTCCTGGGCATATACCCAAAAGATGCTCCAACATATAACAA  200

seq1  GGACACATGCTCTACTATGTTCATAGCAGCCGTAATTATAATAGCCAGAA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGACACATGCTCTACTATGTTCATAGCAGCCGTAATTATAATAGCCAGAA  250

seq1  GCTAGAAAGAACCCAGATGTCTCTCAACAGAGGAATGGATACAGAAAATG  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTAGAAAGAACCCAGATGTCTCTCAACAGAGGAATGGATACAGAAAATG  300

seq1  TAGTACATTTACACAATGGTGTACTACTCAGCAATTAAAAACAATGAGTT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGTACATTTACACAATGGTGTACTACTCAGCAATTAAAAACAATGAGTT  350

seq1  TATGAAATTCTTAGACAAATGGATGGATCTGGAGGATATCATTCTGAGTG  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATGAAATTCTTAGACAAATGGATGGATCTGGAGGATATCATTCTGAGTG  400

seq1  AGGTAACCTGAGAGTTTTAAGATGAAATAAACCCTTTGTTCCCCAAGTTC  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGTAACCTGAGAGTTTTAAGATGAAATAAACCCTTTGTTCCCCAAGTTC  450

seq1  CTCTTGGTCATAGCATGTTTTCACAGCAATAGAAACCTAACTAAGACAGG  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCTTGGTCATAGCATGTTTTCACAGCAATAGAAACCTAACTAAGACAGG  500

seq1  TCATGTCATAGTTCCCTGAATTATTTTTAAAATTATTTATTCACTTTTTA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCATGTCATAGTTCCCTGAATTATTTTTAAAATTATTTATTCACTTTTTA  550

seq1  TCCCAATATTAGCCATGCTTTCCTCCCAGTAACCCCACAGGCAAAACCCT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCCAATATTAGCCATGCTTTCCTCCCAGTAACCCCACAGGCAAAACCCT  600

seq1  CCTCCATTCTACCTTTCCCTTATCATTTGAGAATGGAAATCCCCAATCTA  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTCCATTCTACCTTTCCCTTATCATTTGAGAATGGAAATCCCCAATCTA  650

seq1  GGTCTATCTTTGTCTCTCTATTTCTCTCTCTCTGTCTCTCTCTCTCTCTC  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTCTATCTTTGTCTCTCTATTTCTCTCTCTCTGTCTCTCTCTCTCTCTC  700

seq1  TCTCTCTCTCTCTCTCACACACACACACACACACACACACACACACACAC  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTCTCTCTCTCTCTCACACACACACACACACACACACACACACACACAC  750

seq1  ACACACTTACACATAAACACACACACACACACACACACATACATACATAC  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACACACTTACACATAAACACACACACACACACACACACATACATACATAC  800

seq1  ACTCTACCCTACCCCTCACTCTGAACATCAAGTCACTG-AAGGACTAGGC  849
      |||||||||||||||||||||||||||||||||||||| |||||||||||
seq2  ACTCTACCCTACCCCTCACTCTGAACATCAAGTCACTGAAAGGACTAGGC  850

seq1  ACATCC-TTTCCCACTGAGACTAGACAAGGTGTCCCAGTTAGGGGAACAG  898
      |||||| ||||||||||||||||||| | |||||||||||||||||||||
seq2  ACATCCTTTTCCCACTGAGACTAGACCA-GTGTCCCAGTTAGGGGAACAG  899

seq1  CATCCACAGGCAAGTAACAA-CTCCAGTTGTTGGCGTACCCACCTGAAGA  947
      |||||||| ||||||||||| ||||||||||| |||||||||||||||||
seq2  CATCCACA-GCAAGTAACAACCTCCAGTTGTT-GCGTACCCACCTGAAGA  947

seq1  CCAAGCCTGATTACATGCATCATAATTTGTGCAATGAAGAGATAAACATT  997
      || ||||||  ||||||||||||||||||||| ||||| |||||   | |
seq2  CC-AGCCTGGATACATGCATCATAATTTGTGC-ATGAA-AGATA---ACT  991

seq1  TTATTTTTAGTTTTCTGA  1015
      ||| ||||||||||||||
seq2  TTA-TTTTAGTTTTCTGA  1008

seq1: chrX_89637152_89638323
seq2: B6Ng01-264F08.g_65_1225 (reverse)

seq1  AAAAAAAAT-AGATCCTTTTAAACTCCATGCTAATGTAGAAGCTTACACA  49
      ||||||||| |||||||||   ||||   ||||||| ||| |||||||||
seq2  AAAAAAAATCAGATCCTTT---ACTCATGGCTAATG-AGAGGCTTACACA  46

seq1  TTGATACCAGCATATGATAATTTATCTAAATCTAAACTGAAATCTCAGCA  99
       ||| ||  |||||||||| ||  ||||||||| ||||| ||||||||||
seq2  -TGAAACAGGCATATGATAGTTATTCTAAATCT-AACTG-AATCTCAGCA  93

seq1  GTATGTGTAGAAATTACAAATGAAAGAGAAGTATTTATCACTTCTTGGGT  149
      ||||||||||||| ||||||||||||||||||| |||||||||| |||||
seq2  GTATGTGTAGAAA-TACAAATGAAAGAGAAGTA-TTATCACTTC-TGGGT  140

seq1  CCAGTACATTGAAATAACCAGAGGAAATAGAGAAAATATTGATGCCCAAG  199
      |||||||| |||||||||||||||||||||||||||||||||||||| ||
seq2  CCAGTACA-TGAAATAACCAGAGGAAATAGAGAAAATATTGATGCCC-AG  188

seq1  TTCTATTAATTAATTATAACATTTTCCTTGAGTAAGATCTTTAAATTGCT  249
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCTATTAATTAATTATAACATTTTCCTTGAGTAAGATCTTTAAATTGCT  238

seq1  ATATTTAAAAAGCTACCAAAGAGGGTTGGAGAGATGGCTCAGCGGTTAAG  299
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATATTTAAAAAGCTACCAAAGAGGGTTGGAGAGATGGCTCAGCGGTTAAG  288

seq1  AGCACTAACTGCTCTTCCAGAGGTCCTGAGTTTAATTCCCAGCAACCACA  349
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCACTAACTGCTCTTCCAGAGGTCCTGAGTTTAATTCCCAGCAACCACA  338

seq1  TAGTGGCTCACAACCATCTGTAATGGGATCTGATGCCCTCTTCTGGTATG  399
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGTGGCTCACAACCATCTGTAATGGGATCTGATGCCCTCTTCTGGTATG  388

seq1  TCTGAAGATAACTATGGTGTGCTCATATACATAGATAAATAAATAAATAA  449
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTGAAGATAACTATGGTGTGCTCATATACATAGATAAATAAATAAATAA  438

seq1  ATCATTTTTTAGAAGCTATCAAAGAGATGCTAATGTTGACAATCAAAAAT  499
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCATTTTTTAGAAGCTATCAAAGAGATGCTAATGTTGACAATCAAAAAT  488

seq1  TTAGTTAGTAGTAACGGCTTAAAGAATGTTAAGAAGATAGACTTTCCATA  549
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAGTTAGTAGTAACGGCTTAAAGAATGTTAAGAAGATAGACTTTCCATA  538

seq1  AAAATAACTGCTCTAGTTGCTTAATAAACATGTCAAATTAAATCAATTAC  599
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAATAACTGCTCTAGTTGCTTAATAAACATGTCAAATTAAATCAATTAC  588

seq1  ATAAAAGATCAAATCTCACTTATATATGTATATATACATATTCTATACAT  649
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATAAAAGATCAAATCTCACTTATATATGTATATATACATATTCTATACAT  638

seq1  ATATAATGCATAAATACATACATATATATCAGAAAGGAAACTGAGGCTAG  699
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATATAATGCATAAATACATACATATATATCAGAAAGGAAACTGAGGCTAG  688

seq1  AGAATTACAAATTTTATATCAACCTGGACTACATAGAAAATTTTGTGACA  749
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAATTACAAATTTTATATCAACCTGGACTACATAGAAAATTTTGTGACA  738

seq1  TCTTGGGCTACATAGCAAGACATTGATTCAAAAACATGAAAACAAATCAA  799
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTTGGGCTACATAGCAAGACATTGATTCAAAAACATGAAAACAAATCAA  788

seq1  AAACTTTAAAATATATCTCACAAAATGGTTATTTTATGCTGAGCAATAAT  849
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAACTTTAAAATATATCTCACAAAATGGTTATTTTATGCTGAGCAATAAT  838

seq1  CCAATACTCTAGAAAGGCAAAACACACTACATTTTAAAGCAATATGTTAT  899
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCAATACTCTAGAAAGGCAAAACACACTACATTTTAAAGCAATATGTTAT  888

seq1  AAATTGCTGCTTGTAGCTGTCATTCCAATATTTGATTTAAATTCTCTATT  949
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAATTGCTGCTTGTAGCTGTCATTCCAATATTTGATTTAAATTCTCTATT  938

seq1  GTTTCCATCCAATTCATCATATCTATAGCTGCTCAAATATGATGGCAAAG  999
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTTCCATCCAATTCATCATATCTATAGCTGCTCAAATATGATGGCAAAG  988

seq1  TCAGATAATAAGGATAGTTTAAAATATGTTTGTCTACATGGAGAGCCCAT  1049
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCAGATAATAAGGATAGTTTAAAATATGTTTGTCTACATGGAGAGCCCAT  1038

seq1  ACTTGGTTCCATAAAGACACTTAGAATCTGGCTAAGTTAAGACTGAGATA  1099
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTTGGTTCCATAAAGACACTTAGAATCTGGCTAAGTTAAGACTGAGATA  1088

seq1  GAAAGGACTGAAGCCTATATATTCTATATGTGCCCATCTATTATACATTC  1149
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAAGGACTGAAGCCTATATATTCTATATGTGCCCATCTATTATACATTC  1138

seq1  AACTGGGCCAATGTCAGGAATTC  1172
      |||||||||||||||||||||||
seq2  AACTGGGCCAATGTCAGGAATTC  1161

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Alignment Information