BAC Information

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BAC

Clone NameB6Ng01-264P11
ChromosomeX (Build37)
Map Location 73,002,379 - 73,181,637
singlet/doubletdoublet
Overlap genePls3, LOC635275
Upstream geneOlfr1327-ps1, LOC628637, LOC667413, LOC100041594, LOC627775, EG546325, LOC100041017, EG628573, LOC100041642, LOC667437, EG667446, LOC669291, Gab3, Dkc1, Mpp1, EG547412, 4930428E23Rik, EG667190, F8, LOC572559, LOC667218, Fundc2, Mtcp1, Brcc3, LOC667496, Vbp1, Rab39b, EG635243
Downstream geneEG635295, LOC667537, LOC385472, LOC100041147, EG238829, Magea7, 4930428D18Rik, EG544974, 4930468A15Rik
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-264P11.bB6Ng01-264P11.g
ACCGA068738GA068739
length1,166763
definitionB6Ng01-264P11.b B6Ng01-264P11.g
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(73,180,475 - 73,181,637)(73,002,379 - 73,003,139)
sequence
gaattcaaatcccacccccacaatgatacatttcctccaacaaggccaca
cctactccatcaaggccacacctcctaatagtgtcactcctcaagggcca
agaattcaaacatattcatctatgggcatcatacctattcaaaccaacac
agtcctttcatttaccagcagccacatcacacagctcacacatgcctaaa
ataccagttctgagtgatctgatgccctcttcggcattctgcaggtacct
gcacacatttggtacccataaacccatgcaggcatacacatgtatacata
acttaaaataatgttttaaaaaaatactggctcacgggagataaaataca
atgaaaagataacacacaatgggagattattctaagtccagtgtaaaaca
tgaaaagatgtggagagagaaaaagattgaaatgacaggaagaatgataa
agaagattccagacttgcttatgtaagcttatgtaggtcaagggtgcgga
taaagagcagtttcgaagaatgtgaaacaaggcaattgagttaggatggc
agagaattttgtgtattataattaattgctttagagttctaggctaattc
ttatttgccagcattctaacagttgtcccacctggattgttggtacagga
ggctgagggaagacagggctaagggcatggctaagtagtagaagatgttt
ctgtaagaccatggcgaccatcccagcacatttttgaaaaagctaaaaga
caagcaatgggcagtttctggaggttaggctcctggtttgactggggcag
ttagacattgttaccttaggcatgggttttgaactcagatttttcagtgt
ggttatccctcggatctctcatagtagaaagtaaggtgaatttcaaagag
aaagcttcagcctatgaagaacagtaatgagaaaaataagaaacattggg
caatatttagttacataagtagttccttgccattttaaggccaggagaat
gtgttaaggaaaattgaacaattatcttctggcaactttcctagttaaca
atctctacactctgctcttaaatctgtgaagatcctcaaggttttgtgga
ggcaatggaagagaatgcgtggaaataatatctattctagaacaatcgtt
ctaagtatcgaagtac
gaattccagaaccatttctattcttccagaaatccctggctacggcagag
aaggtcaggtttcttttgaccctttatcctgcctcatctccctggatgtt
aaggaagggaaggtagtagggagaagtcctaagtaggctgctgcctgctt
ggatgtcaatcatcacagcaagcaggctttcaaggacccaggaggatggt
accctggcagccttggctgtttaggacacccttggaaatacagcatagcc
tggctgtttctaagctgtttctcctcagtttcaccagaggccaggacact
ggctaggctcctggcccacatggggctcacagtgaggttgcttgcacagg
atcatggtggagcctccaggaccactgaagggttctagggatgagggtgt
tttcccgaggggcctgggaccctgctctgaacccgcagcacagctcaaag
agagagtctgttctaaaagagaggaagggaaacccaagatgacccgaaac
ataggaagggaatgaggaggaattgaggcctgcagggagggagctaactg
gatgaaagaaatctatctggccacaaaagctacctgagatactgagacag
agcagagaagcatgataacctgcatctctctctctctctgtctctctgtc
tctctctctctctctctctctctctctcacacacacacacacacacacac
acacacagaaacacacacagtttgtctctctctgtgttatcacggggtgg
ggggtgggggggg
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chrX_73180475_73181637
seq2: B6Ng01-264P11.b_47_1212 (reverse)

seq1  GTACTTTTGGATACTTCAGGACACGATTTGTTCTTAGAATAGGATATTTA  50
      ||||  || ||||||| ||   |||| |||||| ||||||| |||| |||
seq2  GTAC--TTCGATACTT-AG--AACGA-TTGTTC-TAGAATA-GATA-TTA  41

seq1  TTTCAAC-CATTCTCTTCCAATTCCCTCCACAAAA-CTTGA-GATCTTCA  97
      |||| || ||||||||||| ||| ||||||||||| ||||| ||||||||
seq2  TTTCCACGCATTCTCTTCC-ATTGCCTCCACAAAACCTTGAGGATCTTCA  90

seq1  CAGATTTAAAGAGCAGAGTGTTAGAGA-TGTTAACTAGG-AAGTTGCCAG  145
      ||||||| |||||||||||| |||||| ||||||||||| ||||||||||
seq2  CAGATTT-AAGAGCAGAGTG-TAGAGATTGTTAACTAGGAAAGTTGCCAG  138

seq1  -AGATA--TGTTCATTTTCCTTTAACACATTCTCCTGGCC-TAAAATGGC  191
       |||||  |||||| ||| | ||||||||||||||||||| |||||||||
seq2  AAGATAATTGTTCAATTTTCCTTAACACATTCTCCTGGCCTTAAAATGGC  188

seq1  A--GGACTACTTATGTAACTAAATATTGCCC-ATGTTTCTTATTTTTCTC  238
      |  | |||||||||||||||||||||||||| ||||||||||||||||||
seq2  AAGGAACTACTTATGTAACTAAATATTGCCCAATGTTTCTTATTTTTCTC  238

seq1  ATTACTGTTCTTCATAGGCTGAAGCTTTCTCTTTGAAATTCACCTTACTT  288
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTACTGTTCTTCATAGGCTGAAGCTTTCTCTTTGAAATTCACCTTACTT  288

seq1  TCTACTATGAGAGATCCGA-GGATAACCACACTGAAAAATCTGAGTTCAA  337
      ||||||||||||||||||| ||||||||||||||||||||||||||||||
seq2  TCTACTATGAGAGATCCGAGGGATAACCACACTGAAAAATCTGAGTTCAA  338

seq1  AA-CCATGCCTAAGGTAACAATGTCTAACTGCCCCAGTC-AACCAGGAGC  385
      || |||||||||||||||||||||||||||||||||||| ||||||||||
seq2  AACCCATGCCTAAGGTAACAATGTCTAACTGCCCCAGTCAAACCAGGAGC  388

seq1  CTAACCTCCAGAAACTGCCCATTGCTTGTCTTTTAGCTTTTTCAAAAATG  435
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTAACCTCCAGAAACTGCCCATTGCTTGTCTTTTAGCTTTTTCAAAAATG  438

seq1  TGCTGGGATGGTCGCCATGGTCTTACAGAAACATCTTCTACTACTTAGCC  485
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCTGGGATGGTCGCCATGGTCTTACAGAAACATCTTCTACTACTTAGCC  488

seq1  ATGCCCTTAGCCCTGTCTTCCCTCAGCCTCCTGTACCAACAATCCAGGTG  535
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGCCCTTAGCCCTGTCTTCCCTCAGCCTCCTGTACCAACAATCCAGGTG  538

seq1  GGACAACTGTTAGAATGCTGGCAAATAAGAATTAGCCTAGAACTCTAAAG  585
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGACAACTGTTAGAATGCTGGCAAATAAGAATTAGCCTAGAACTCTAAAG  588

seq1  CAATTAATTATAATACACAAAATTCTCTGCCATCCTAACTCAATTGCCTT  635
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAATTAATTATAATACACAAAATTCTCTGCCATCCTAACTCAATTGCCTT  638

seq1  GTTTCACATTCTTCGAAACTGCTCTTTATCCGCACCCTTGACCTACATAA  685
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTTCACATTCTTCGAAACTGCTCTTTATCCGCACCCTTGACCTACATAA  688

seq1  GCTTACATAAGCAAGTCTGGAATCTTCTTTATCATTCTTCCTGTCATTTC  735
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTTACATAAGCAAGTCTGGAATCTTCTTTATCATTCTTCCTGTCATTTC  738

seq1  AATCTTTTTCTCTCTCCACATCTTTTCATGTTTTACACTGGACTTAGAAT  785
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATCTTTTTCTCTCTCCACATCTTTTCATGTTTTACACTGGACTTAGAAT  788

seq1  AATCTCCCATTGTGTGTTATCTTTTCATTGTATTTTATCTCCCGTGAGCC  835
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATCTCCCATTGTGTGTTATCTTTTCATTGTATTTTATCTCCCGTGAGCC  838

seq1  AGTATTTTTTTAAAACATTATTTTAAGTTATGTATACATGTGTATGCCTG  885
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTATTTTTTTAAAACATTATTTTAAGTTATGTATACATGTGTATGCCTG  888

seq1  CATGGGTTTATGGGTACCAAATGTGTGCAGGTACCTGCAGAATGCCGAAG  935
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATGGGTTTATGGGTACCAAATGTGTGCAGGTACCTGCAGAATGCCGAAG  938

seq1  AGGGCATCAGATCACTCAGAACTGGTATTTTAGGCATGTGTGAGCTGTGT  985
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGGCATCAGATCACTCAGAACTGGTATTTTAGGCATGTGTGAGCTGTGT  988

seq1  GATGTGGCTGCTGGTAAATGAAAGGACTGTGTTGGTTTGAATAGGTATGA  1035
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATGTGGCTGCTGGTAAATGAAAGGACTGTGTTGGTTTGAATAGGTATGA  1038

seq1  TGCCCATAGATGAATATGTTTGAATTCTTGGCCCTTGAGGAGTGACACTA  1085
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCCCATAGATGAATATGTTTGAATTCTTGGCCCTTGAGGAGTGACACTA  1088

seq1  TTAGGAGGTGTGGCCTTGATGGAGTAGGTGTGGCCTTGTTGGAGGAAATG  1135
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAGGAGGTGTGGCCTTGATGGAGTAGGTGTGGCCTTGTTGGAGGAAATG  1138

seq1  TATCATTGTGGGGGTGGGATTTGAATTC  1163
      ||||||||||||||||||||||||||||
seq2  TATCATTGTGGGGGTGGGATTTGAATTC  1166

seq1: chrX_73002379_73003139
seq2: B6Ng01-264P11.g_67_829

seq1  GAATTCCAGAACCATTTCTATTCTTCCAGAAATCCCTGGCTACGGCAGAG  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCCAGAACCATTTCTATTCTTCCAGAAATCCCTGGCTACGGCAGAG  50

seq1  AAGGTCAGGTTTCTTTTGACCCTTTATCCTGCCTCATCTCCCTGGATGTT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGGTCAGGTTTCTTTTGACCCTTTATCCTGCCTCATCTCCCTGGATGTT  100

seq1  AAGGAAGGGAAGGTAGTAGGGAGAAGTCCTAAGTAGGCTGCTGCCTGCTT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGGAAGGGAAGGTAGTAGGGAGAAGTCCTAAGTAGGCTGCTGCCTGCTT  150

seq1  GGATGTCAATCATCACAGCAAGCAGGCTTTCAAGGACCCAGGAGGATGGT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGATGTCAATCATCACAGCAAGCAGGCTTTCAAGGACCCAGGAGGATGGT  200

seq1  ACCCTGGCAGCCTTGGCTGTTTAGGACACCCTTGGAAATACAGCATAGCC  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCCTGGCAGCCTTGGCTGTTTAGGACACCCTTGGAAATACAGCATAGCC  250

seq1  TGGCTGTTTCTAAGCTGTTTCTCCTCAGTTTCACCAGAGGCCAGGACACT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGCTGTTTCTAAGCTGTTTCTCCTCAGTTTCACCAGAGGCCAGGACACT  300

seq1  GGCTAGGCTCCTGGCCCACATGGGGCTCACAGTGAGGTTGCTTGCACAGG  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGCTAGGCTCCTGGCCCACATGGGGCTCACAGTGAGGTTGCTTGCACAGG  350

seq1  ATCATGGTGGAGCCTCCAGGACCACTGAAGGGTTCTAGGGATGAGGGTGT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCATGGTGGAGCCTCCAGGACCACTGAAGGGTTCTAGGGATGAGGGTGT  400

seq1  TTTCCCGAGGGGCCTGGGACCCTGCTCTGAACCCGCAGCACAGCTCAAAG  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTCCCGAGGGGCCTGGGACCCTGCTCTGAACCCGCAGCACAGCTCAAAG  450

seq1  AGAGAGTCTGTTCTAAAAGAGAGGAAGGGAAACCCAAGATGACCCGAAAC  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAGAGTCTGTTCTAAAAGAGAGGAAGGGAAACCCAAGATGACCCGAAAC  500

seq1  ATAGGAAGGGAATGAGGAGGAATTGAGGCCTGCAGGGAGGGAGCTAACTG  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATAGGAAGGGAATGAGGAGGAATTGAGGCCTGCAGGGAGGGAGCTAACTG  550

seq1  GATGAAAGAAATCTATCTGGCCACAAAAGCTACCTGAGATACTGAGACAG  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATGAAAGAAATCTATCTGGCCACAAAAGCTACCTGAGATACTGAGACAG  600

seq1  AGCAGAGAAGCATGATAACCTGCATCTCTCTCTCTCTCTGTCTCTCTGTC  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCAGAGAAGCATGATAACCTGCATCTCTCTCTCTCTCTGTCTCTCTGTC  650

seq1  TCTCTCTCTCTCTCTCTCTCTCTCTCTCACACACACACACACACACACAC  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTCTCTCTCTCTCTCTCTCTCTCTCTCACACACACACACACACACACAC  700

seq1  ACACACAGAAACACACACAGTTTGTCTCTCTCTGTG-TATCACGGGGT-G  748
      |||||||||||||||||||||||||||||||||||| ||||||||||| |
seq2  ACACACAGAAACACACACAGTTTGTCTCTCTCTGTGTTATCACGGGGTGG  750

seq1  GGGGTGGGGGGGG  761
      |||||||||||||
seq2  GGGGTGGGGGGGG  763