BAC Information

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BAC

Clone NameB6Ng01-267M01
ChromosomeX (Build37)
Map Location 32,052,606 - 32,198,591
singlet/doubletdoublet
Overlap geneLOC100039460, LOC100040781
Upstream geneLOC100040552, LOC100040575, LOC100040585, LOC100039362, LOC100040606, LOC100040612, LOC673784, LOC100040650, LOC100040662, LOC100039419, LOC100039429, LOC100040698, LOC630028, LOC100040722, LOC100040732, LOC100040743, LOC385298
Downstream geneLOC100039515, LOC100039522, LOC100039473, LOC100039550, LOC100039557, LOC100039573, EG665074, LOC100039585, LOC100039497
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-267M01.bB6Ng01-267M01.g
ACCGA070792GA070793
length1,0191,110
definitionB6Ng01-267M01.b B6Ng01-267M01.g
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(32,197,555 - 32,198,591)(32,052,606 - 32,053,693)
sequence
gaattctctaacttcttggaattctttcttatttcaaccctgaccaagta
tcattcagcagaaagtttttcagttttcatgagtatgtggactttctgtt
gttttggttgttattgacatctagccttatcctgatgttatctgatagaa
tgcatgtgagtattcccattttcttgtatctgttgatgcttttgttttat
gaccaattatattatcagttttggggaatgttccatgaggaactcagaag
aatatatattctcttgttttggcatgaaatgttctattgatatctattaa
atccatttgggtcaagacttctgttagttttactgtgtctctgttatttt
ctttttttttttttttttttagggatgacctgtttctgcaccttagtggt
ctcggctagaagacttgaagacaggccagcccacagatataggcatttct
aattttatgtacttgcaacttgatcatacagcatgcaagaatgtgttaga
gccaaggagatttcaaaaaaataattgaaaacataaacaaaggcaattaa
gtacacaactgtgttcaaaatttattattgacgggtacttgagatcagga
gttacagattcatttgatgaacttttaccttgggtttttttttatactac
tcaaatcaggcctatcaatttgtattcaagtgatgttgttttgcatgtgt
gttgacactcagcattcccctctacagagacacagtggctgccttactcc
agaaggatctgtgtctaatttagttcatctttctttctttcttttttttc
cattgtttattaggtatttagctcatttacatttccaatgctataccaaa
agtcccccatacccacccaccccactcccctacccaccactccccttttt
ggccctggcgttccctgtactgggcattataaagtttgcagctaatgggc
cttcattgcagtgatgcgactagcattctttgatacatatgcagctagag
acagagcttcggggtactg
gaattctatcccaggtggttcctgttagaccttctgtgtttgcattgctc
tgttttatgtaagaatccagtaacctctttctacgttgcgggtatgtcac
ccaacttccttattgtcttctgtataaaaagtttgatgctcgatttgaca
aattacattcagattctacacaatctctcctgtgtgcatctttctgtcat
tcatctgacgctttgcccacccgtgactagagacccgttccacgcagaca
aacgcacccagcgggtctgcagcagggtaacctttgagaaggtgatcaaa
agcagaggaatgtaaaagtcttggctgagctccacccagcagacaccacc
attaagtaggcctccaagtacagtgcacatattcataggagtattttcaa
cataaaaggagtctgagtttctcagtttagcttctcctgaggccgtaatg
tactggctaggtaaaaacgtatcttggaaggggcaactttactaatgaaa
gcttccaaactaacaatctacaattgcctatgatagatcctgaaaaatta
catataggatttttgcttaaaactggactactcaatttcattccttgatt
tctaaaggcctgaataaatgataataagctcccctcatcatgtattcaaa
agaaccaggtttttgaaagtctgattgaaaacaaccctctctctccccaa
tagttccaggccatagaaaaagaattagtctttcctggcagactaaatgt
taatcatgaacactaaccagtatcaagccaaggaaagagacgctggagct
caccaacatctatgttaggaaactaacaggcctataagctcctaagagct
tcattctgcaccaggttattgacacagatgataacaagatgttagaaatt
acaaagactactctttagtagatgtggtggtttgaatattctgggcccaa
agagtgacactattagagtgtgcccttgtgaagtaagtgtgtcttatgga
gaaagtgtcttcacttatggggagggtgttgaggctctattgctcaggtc
ctgctcaagagaattgatagcctccttctggctgcttaacgaaggatgtc
ctcctggctg
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chrX_32197555_32198591
seq2: B6Ng01-267M01.b_44_1062 (reverse)

seq1  CAGTACCCCGGAGCTCTTGTCTCTAGCTGCATATGTATCAAAAGATGGCC  50
      |||||||||| ||||| |||||||||||||||||||||||||  |||  |
seq2  CAGTACCCCGAAGCTC-TGTCTCTAGCTGCATATGTATCAAAGAATG--C  47

seq1  TAGTCGGCCATCACTGCAATGAGAGGCCCATTGGACTTGCAAACTTTAT-  99
      ||||||  |||||||||||||| |||||||||  |  |||||||||||| 
seq2  TAGTCG--CATCACTGCAATGA-AGGCCCATT--AGCTGCAAACTTTATA  92

seq1  ATGCCCAAGTACAGGGGAACGCCAGGGCCAAAAAGGGGGAGTGGGTGGAT  149
      |||||| |||||| |||||||||||||||||||| ||||||| ||||| |
seq2  ATGCCC-AGTACA-GGGAACGCCAGGGCCAAAAA-GGGGAGT-GGTGGGT  138

seq1  AGGGGAGTGGGGGTGGGTGGGTATGGGGGACTTTTGGTATAGCATTGGAA  199
      |||||||| |||||||||||||||||||||||||||||||||||||||||
seq2  AGGGGAGT-GGGGTGGGTGGGTATGGGGGACTTTTGGTATAGCATTGGAA  187

seq1  ATGTAAATGAGCTAAATACCTAATAAAATATGGAAAAAAAAGAAAGAAAG  249
      |||||||||||||||||||||||||||  |||||||||||||||||||||
seq2  ATGTAAATGAGCTAAATACCTAATAAACAATGGAAAAAAAAGAAAGAAAG  237

seq1  AAAGATGAACTAAATAAGACACAGATCCTTCTGGAGTAAGGCAGCCACTG  299
      ||||||||||||||| ||||||||||||||||||||||||||||||||||
seq2  AAAGATGAACTAAATTAGACACAGATCCTTCTGGAGTAAGGCAGCCACTG  287

seq1  TGTCTCTGTAGAGGGGGATGCTGAGTGTCAACACACATGCAAAACAACAT  349
      |||||||||||||||| |||||||||||||||||||||||||||||||||
seq2  TGTCTCTGTAGAGGGGAATGCTGAGTGTCAACACACATGCAAAACAACAT  337

seq1  CACTTGAATACAAATTGATAGGCCTGATTTGAGTAGTAT-AAAAAAAACC  398
      ||||||||||||||||||||||||||||||||||||||| ||||||||||
seq2  CACTTGAATACAAATTGATAGGCCTGATTTGAGTAGTATAAAAAAAAACC  387

seq1  CAAGGTAAAAGTTCATCAAATGAATTTGTAACTCCTGATCTCAAGTACCC  448
      ||||||||||||||||||||||||| ||||||||||||||||||||||||
seq2  CAAGGTAAAAGTTCATCAAATGAATCTGTAACTCCTGATCTCAAGTACCC  437

seq1  GTCAATAATAATTTTTGAACACAGTTGTGTACTTAATTGCCTTTGTTTAT  498
      ||||||||||| ||||||||||||||||||||||||||||||||||||||
seq2  GTCAATAATAAATTTTGAACACAGTTGTGTACTTAATTGCCTTTGTTTAT  487

seq1  GTTTTCAATTATATTTTTGAAATCTCATTGGCTCTAACACATTCTTGCAT  548
      |||||||||||| ||||||||||||| |||||||||||||||||||||||
seq2  GTTTTCAATTATTTTTTTGAAATCTCCTTGGCTCTAACACATTCTTGCAT  537

seq1  GCTGTATGATCAAGTTGCAATTACATAAAATTAGAAATTCCTATATCTGT  598
      |||||||||||||||||||| ||||||||||||||||| |||||||||||
seq2  GCTGTATGATCAAGTTGCAAGTACATAAAATTAGAAATGCCTATATCTGT  587

seq1  GGGCTGGACTGTCTTCAAGTCTTCTAGCTGAGACCACTAAGGTGCAGAAA  648
      ||||||| |||||||||||||||||||| |||||||||||||||||||||
seq2  GGGCTGGCCTGTCTTCAAGTCTTCTAGCCGAGACCACTAAGGTGCAGAAA  637

seq1  CAGGTCATCCCTAAAAAAAAAAAAAAAAAAAAAAAAAAGAAAATAACAGA  698
      ||||||||||||       |||||||||||||||||||||||||||||||
seq2  CAGGTCATCCCT-------AAAAAAAAAAAAAAAAAAAGAAAATAACAGA  680

seq1  GACACAGTAAAACTTACAGAAGTCTTGACCCAAATGGATTTAATAGATAT  748
      |||||||||||||| |||||||||||||||||||||||||||||||||||
seq2  GACACAGTAAAACTAACAGAAGTCTTGACCCAAATGGATTTAATAGATAT  730

seq1  TAATAGAACATTTCATGCCAAAACAAGAGAATATATATTCTTCTGAGTTC  798
       |||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAATAGAACATTTCATGCCAAAACAAGAGAATATATATTCTTCTGAGTTC  780

seq1  CTCATGGAACATTTCCCAAAACTGATAATATAATTGGTCATAAAACAGAA  848
      ||||||||||||| ||||||||||||||||||||||||||||||||| ||
seq2  CTCATGGAACATTCCCCAAAACTGATAATATAATTGGTCATAAAACAAAA  830

seq1  GCATCAACAGATACAAGAGAATGGGAATACTCACATGCATTCTATCAGAT  898
      |||||||||||||||||| |||||||||||||||||||||||||||||||
seq2  GCATCAACAGATACAAGAAAATGGGAATACTCACATGCATTCTATCAGAT  880

seq1  AATATTAGGATAAGGCTAGATGTCAATAACAACCAAAACAACAAAAAGTC  948
      || || ||||||||||||||||||||||||||||||||||||| ||||||
seq2  AACATCAGGATAAGGCTAGATGTCAATAACAACCAAAACAACAGAAAGTC  930

seq1  CACATACTATTGAAAACTGAAAAACTTTCTGCTGAATGATACTTGGTCAG  998
      ||||||||  ||||||||||||||||||||||||||||||||||||||||
seq2  CACATACTCATGAAAACTGAAAAACTTTCTGCTGAATGATACTTGGTCAG  980

seq1  GGTTGAAATAAGAAAGAATTCCAAGAAGTTAGAGAATTC  1037
      |||||||||||||||||||||||||||||||||||||||
seq2  GGTTGAAATAAGAAAGAATTCCAAGAAGTTAGAGAATTC  1019

seq1: chrX_32052606_32053693
seq2: B6Ng01-267M01.g_69_1178

seq1  GAATTCTATCCCAGGTGGTTCCTGTTAGACCTTCTGTGTTTGCATTCCTC  50
      |||||||||||||||||||||||||||||||||||||||||||||| |||
seq2  GAATTCTATCCCAGGTGGTTCCTGTTAGACCTTCTGTGTTTGCATTGCTC  50

seq1  TGTTTTATGTAAGAATCCAGTAACCTCTTTCTACGTTGCGGGTATGTCAC  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTTTTATGTAAGAATCCAGTAACCTCTTTCTACGTTGCGGGTATGTCAC  100

seq1  CCAACTTCCTTATTGTCTTCTGTATAAAAAGTTTGATGCTTGATTTGACA  150
      |||||||||||||||||||||||||||||||||||||||| |||||||||
seq2  CCAACTTCCTTATTGTCTTCTGTATAAAAAGTTTGATGCTCGATTTGACA  150

seq1  AATTACATTCAGATTCTACACAATCTCTCCTGTGTGCATCTTTCTGTCAT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATTACATTCAGATTCTACACAATCTCTCCTGTGTGCATCTTTCTGTCAT  200

seq1  TCATCTGACGCTTTGCCCACCCGTGACTAGAGACCCGTTCCACGCAGACA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCATCTGACGCTTTGCCCACCCGTGACTAGAGACCCGTTCCACGCAGACA  250

seq1  AAGGCACCCAGAGGGTCTGCAGCAGGGTAACCTTTGAGAAGGTGATCAAA  300
      || |||||||| ||||||||||||||||||||||||||||||||||||||
seq2  AACGCACCCAGCGGGTCTGCAGCAGGGTAACCTTTGAGAAGGTGATCAAA  300

seq1  AGCAGAGGAATGTAAAAGTCTTGGCTGAGCTCCACCCAGCAGACACCACC  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCAGAGGAATGTAAAAGTCTTGGCTGAGCTCCACCCAGCAGACACCACC  350

seq1  ATTAAGTAGGCCTCCAAGTACAGTGCACATATTCATAGGAGTATTTTCAA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTAAGTAGGCCTCCAAGTACAGTGCACATATTCATAGGAGTATTTTCAA  400

seq1  CATAAAAGGAGTCTGAGTTTCTCAGTTTAGCTTCTCCTGAGGCCGTAATG  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATAAAAGGAGTCTGAGTTTCTCAGTTTAGCTTCTCCTGAGGCCGTAATG  450

seq1  TACTGGCTAGGTAAAAACGTATCTTGGAAGGGGCAACTTTACTAATGAAA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACTGGCTAGGTAAAAACGTATCTTGGAAGGGGCAACTTTACTAATGAAA  500

seq1  GCTTCCAAACTAACAATCTACAATTGCCTATGATAGATCCTGAAAAATTA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTTCCAAACTAACAATCTACAATTGCCTATGATAGATCCTGAAAAATTA  550

seq1  CATATAGGATTTTTGCTTAAAACTGGACTACTCAATGTCATTCCTTGATT  600
      |||||||||||||||||||||||||||||||||||| |||||||||||||
seq2  CATATAGGATTTTTGCTTAAAACTGGACTACTCAATTTCATTCCTTGATT  600

seq1  TCTAAAGGCCTGAATAAATGATAATAAGCTCCCCTCATCATGTATTCAAA  650
      |||||||                      |||||||||||||||||||||
seq2  TCTAAAGNNNNNNNNNNNNNNNNNNNNNNTCCCCTCATCATGTATTCAAA  650

seq1  AGAACCAGGTTTTTGAAAGTCTGATTGAAAACAACCCTCTCTCTCCCCAA  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAACCAGGTTTTTGAAAGTCTGATTGAAAACAACCCTCTCTCTCCCCAA  700

seq1  TAGTTCCAGGCCATAGAAAAAGAATTAGTCTTTCCTGGAAGACTAAATGT  750
      |||||||||||||||||||||||||||||||||||||| |||||||||||
seq2  TAGTTCCAGGCCATAGAAAAAGAATTAGTCTTTCCTGGCAGACTAAATGT  750

seq1  TAATCATGAACACTAACCAGTATCAAGCCAAGGAAAGAGACGCTGGAGCT  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAATCATGAACACTAACCAGTATCAAGCCAAGGAAAGAGACGCTGGAGCT  800

seq1  CACCAACATCTATGTTAGGAAACTAACAGGCCTATAAGCTCCTAAGAGCT  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACCAACATCTATGTTAGGAAACTAACAGGCCTATAAGCTCCTAAGAGCT  850

seq1  TCATTCTGCACCAGGTTATTGACACAGATGATAACAAGATGTTAGAAATT  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCATTCTGCACCAGGTTATTGACACAGATGATAACAAGATGTTAGAAATT  900

seq1  ACAAAGACTACTCTTTAGTAGATGTGGTGGTTTGAATATTCTTGGGCCAA  950
      |||||||||||||||||||||||||||||||||||||||||| || ||||
seq2  ACAAAGACTACTCTTTAGTAGATGTGGTGGTTTGAATATTCTGGGCCCAA  950

seq1  AGAGTGACACTATTAGGAGGTGTGCCCTTGTGAAGTAGGTGTGGTCTTAT  1000
      ||||||||||||||||   |||||||||||||||||| |||| |||||| 
seq2  AGAGTGACACTATTAG--AGTGTGCCCTTGTGAAGTAAGTGT-GTCTTA-  996

seq1  TGGAGAAAGTGTC-TCAC-TATGGGGAGGGGTGTTGAGGCTCCTATGCTC  1048
      ||||||||||||| |||| |||||||| ||||||||||||||   |||||
seq2  TGGAGAAAGTGTCTTCACTTATGGGGA-GGGTGTTGAGGCTCTATTGCTC  1045

seq1  AGGTTCTGCTCAAAGAGAAATGAGAGCCTCCTCCTGGCTG----------  1088
      |||| |||||| ||||||| ||| |||||||| |||||||          
seq2  AGGTCCTGCTC-AAGAGAATTGATAGCCTCCTTCTGGCTGCTTAACGAAG  1094

seq1  ----------------  1088
                      
seq2  GATGTCCTCCTGGCTG  1110