BAC Information

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BAC

Clone NameB6Ng01-267P04
ChromosomeX (Build37)
Map Location 114,667,577 - 114,726,760
singlet/doubletdoublet
Overlap genenone
Upstream geneEG624153, LOC100039300, EG665045, LOC100039319, LOC624284
Downstream geneLOC665066, EG624388, ENSMUSG00000072994, LOC100039551, Tgifx1
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-267P04.bB6Ng01-267P04.g
ACCGA070938GA070939
length1,112923
definitionB6Ng01-267P04.b B6Ng01-267P04.g
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(114,725,648 - 114,726,760)(114,667,577 - 114,668,101)
sequence
gaattcagtggtttgttgatttttcccatcatgtttatttgtttggattt
tcttttattaatcttatggatcttttgcttgtacaatatggtttctgata
ctgtgggttttttttttaatacgttttgagtttgcatgtatatgtttatt
tgtgttttcttctgtctactgtttttctctttttgtgtttgttgttttga
ttcttttaattctagtttgcttggatttttttgactgttttctaaatagt
gagataaagaagtttgtagtttgatggatgtagatgtggatgtcacgagg
atctagacgaaggtagaaaccatgatcagaatatgttgtgtgacttttca
atgaaacataaaaattaaagttacatggctactttgacaggattaaaatt
atatactgtcagtcttgaattcactgtattttgatatacattgaatatta
atgacgtgcatatgctggttatgaaaagttacttctagtgaggcttattt
aggagtgaggacccatcagaggcatcaacctaagaactatacaaaaggaa
tgaaagaaaaaatgtgtcaccctatttctagtcaaataatctgaaaaatt
aaccatattaatttttcaaccatattaccccacaaacatgagctataata
tgtctaactcaatgtagtatactctgtcaccaaactgtgtctagccaaat
atttggttataaaagcagacaattaacagagaacaagaagaaagggacat
ggcaaaatgttaaattagagcatacagggaaacttcaaaatgttaaatca
aataaaaatgcctgtttgaatgagactatagaaaagctccctctcacaca
gggcttgatgtttctgaagaaacagacactgacatggaaacgagaagctc
agaaaatatcatactggaaaacagcaaactattataattgatgcacgaca
tgagaatctttgcctacattaacttataaatatttggtgttcattatctt
ttcagttgcctatgatcaaatatatgacaaaatttatagggtaacaattt
tggctaatgtttctcaggttaaaaggtctatcatgggtaggtaagcactg
cgttcagcagca

gaattctcattcagaacacaataagggatggcttggtttttactctacag
atataaagagacaccatagccaaggagactcccataaaataaaacattta
attgggaactgctaacagtttcagaagtttagccaagtatcattatggta
gacaagttagtggtaggtaggtactggagcagtggctgatagataacata
tttatgaagaggtagcagggaagaaaacactgacttgacatggcataggc
tttgaaaattcaaaggagacctacagtgacacccttcctccaataaggtc
aatctttctaatccttctaatccttttaaagagttcccatccaaactttg
tctctgcaactcgttccatgaatattttattccctcatctagggaggaat
ggaatatccacactttggtcttccttcttgattttcttgtgttttggaag
ttgtaagttgggtattctaggtttccggactaatatccacttatcagtgg
gtacatatcaaatgacttcttttttaaaaatatttttattaggtattttc
atcatttacatttccaatgctatcccaaaagtccccccataccctccccc
tactcccctaaccacccactcccactttttggccctggcattcccctgta
ctggggcatataaagtttgcaagtccaatgggcctctctttccagtgatg
gccgactaggccatcttttgatacatatgcagctagagtcaagagctcca
gggtactggttagttcataatgttgttccacctatagggttgcagatccc
tttagcttcttggatactttctctagctcctccattgggggccctgtgat
ccatcccatagctgactgtgagcatccacttctgtgtttgctaggccccg
gcatagttctcacagagacagct
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chrX_114725648_114726760
seq2: B6Ng01-267P04.b_48_1159 (reverse)

seq1  TGCTGCTGACGGCAGTGCTTTACCTA-CCATGATAGACTTTTAAACCTTG  49
      |||||||||  ||||||| ||||||| ||||||||||| ||| |||| ||
seq2  TGCTGCTGAACGCAGTGC-TTACCTACCCATGATAGACCTTTTAACC-TG  48

seq1  AGAAACATTAGCCAAAA-TGTTAACCTATAAATTTTTTGTCATAATATTT  98
      ||||||||||||||||| ||||| ||||||||  ||||||||| ||||||
seq2  AGAAACATTAGCCAAAATTGTTACCCTATAAA--TTTTGTCAT-ATATTT  95

seq1  GATCATA-GCAACTGAAAAGATAATGAACA-CAAATA-TTATAAGTTAAT  145
      ||||||| |||||||||||||||||||||| |||||| ||||||||||||
seq2  GATCATAGGCAACTGAAAAGATAATGAACACCAAATATTTATAAGTTAAT  145

seq1  GTAGGCAAAGATTCTCATTGTCGTGCATCAATTATAATAGTTTGCTGTTT  195
      ||||||||||||||||| ||||||||||||||||||||||||||||||||
seq2  GTAGGCAAAGATTCTCA-TGTCGTGCATCAATTATAATAGTTTGCTGTTT  194

seq1  TCCAGTATGATATTTTCTGAGCTTCTCGTTTCCATGTCAGTGTCTGTTTC  245
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCAGTATGATATTTTCTGAGCTTCTCGTTTCCATGTCAGTGTCTGTTTC  244

seq1  TTCAGAAACATCAAGCCCTGTGTGAGAGGGAGCTTTTCTATAGTCTCATT  295
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCAGAAACATCAAGCCCTGTGTGAGAGGGAGCTTTTCTATAGTCTCATT  294

seq1  CAAACAGGCATTTTTATTTGATTTAACATTTTGAAGTTTCCCTGTATGCT  345
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAACAGGCATTTTTATTTGATTTAACATTTTGAAGTTTCCCTGTATGCT  344

seq1  CTAATTTAACATTTTGCCATGTCCCTTTCTTCTTGTTCTCTGTTAATTGT  395
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTAATTTAACATTTTGCCATGTCCCTTTCTTCTTGTTCTCTGTTAATTGT  394

seq1  CTGCTTTTATAACCAAATATTTGGCTAGACACAGTTTGGTGACAGAGTAT  445
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGCTTTTATAACCAAATATTTGGCTAGACACAGTTTGGTGACAGAGTAT  444

seq1  ACTACATTGAGTTAGACATATTATAGCTCATGTTTGTGGGGTAATATGGT  495
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTACATTGAGTTAGACATATTATAGCTCATGTTTGTGGGGTAATATGGT  494

seq1  TGAAAAATTAATATGGTTAATTTTTCAGATTATTTGACTAGAAATAGGGT  545
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAAAAATTAATATGGTTAATTTTTCAGATTATTTGACTAGAAATAGGGT  544

seq1  GACACATTTTTTCTTTCATTCCTTTTGTATAGTTCTTAGGTTGATGCCTC  595
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GACACATTTTTTCTTTCATTCCTTTTGTATAGTTCTTAGGTTGATGCCTC  594

seq1  TGATGGGTCCTCACTCCTAAATAAGCCTCACTAGAAGTAACTTTTCATAA  645
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGATGGGTCCTCACTCCTAAATAAGCCTCACTAGAAGTAACTTTTCATAA  644

seq1  CCAGCATATGCACGTCATTAATATTCAATGTATATCAAAATACAGTGAAT  695
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCAGCATATGCACGTCATTAATATTCAATGTATATCAAAATACAGTGAAT  694

seq1  TCAAGACTGACAGTATATAATTTTAATCCTGTCAAAGTAGCCATGTAACT  745
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCAAGACTGACAGTATATAATTTTAATCCTGTCAAAGTAGCCATGTAACT  744

seq1  TTAATTTTTATGTTTCATTGAAAAGTCACACAACATATTCTGATCATGGT  795
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAATTTTTATGTTTCATTGAAAAGTCACACAACATATTCTGATCATGGT  794

seq1  TTCTACCTTCGTCTAGATCCTCGTGACATCCACATCTACATCCATCAAAC  845
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCTACCTTCGTCTAGATCCTCGTGACATCCACATCTACATCCATCAAAC  844

seq1  TACAAACTTCTTTATCTCACTATTTAGAAAACAGTCAAAAAAATCCAAGC  895
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACAAACTTCTTTATCTCACTATTTAGAAAACAGTCAAAAAAATCCAAGC  894

seq1  AAACTAGAATTAAAAGAATCAAAACAACAAACACAAAAAGAGAAAAACAG  945
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAACTAGAATTAAAAGAATCAAAACAACAAACACAAAAAGAGAAAAACAG  944

seq1  TAGACAGAAGAAAACACAAATAAACATATACATGCAAACTCAAAACGTAT  995
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGACAGAAGAAAACACAAATAAACATATACATGCAAACTCAAAACGTAT  994

seq1  TAAAAAAAAAACCCACAGTATCAGAAACCATATTGTACAAGCAAAAGATC  1045
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAAAAAAAAACCCACAGTATCAGAAACCATATTGTACAAGCAAAAGATC  1044

seq1  CATAAGATTAATAAAAGAAAATCCAAACAAATAAACATGATGGGAAAAAT  1095
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATAAGATTAATAAAAGAAAATCCAAACAAATAAACATGATGGGAAAAAT  1094

seq1  CAACAAACCACTGAATTC  1113
      ||||||||||||||||||
seq2  CAACAAACCACTGAATTC  1112


seq1: chrX_114667577_114668101
seq2: B6Ng01-267P04.g_69_593

seq1  GAATTCTCATTCAGAACACAATAAGGGATGGCTTGGTTTTTACTCTACAG  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTCATTCAGAACACAATAAGGGATGGCTTGGTTTTTACTCTACAG  50

seq1  ATATAAAGAGACACCATAGCCAAGGAGACTCCCATAAAATAAAACATTTA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATATAAAGAGACACCATAGCCAAGGAGACTCCCATAAAATAAAACATTTA  100

seq1  ATTGGGAACTGCTAACAGTTTCAGAAGTTTAGCCAAGTATCATTATGGTA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTGGGAACTGCTAACAGTTTCAGAAGTTTAGCCAAGTATCATTATGGTA  150

seq1  GACAAGTTAGTGGTAGGTAGGTACTGGAGCAGTGGCTGATAGATAACATA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GACAAGTTAGTGGTAGGTAGGTACTGGAGCAGTGGCTGATAGATAACATA  200

seq1  TTTATGAAGAGGTAGCAGGGAAGAAAACACTGACTTGACATGGCATAGGC  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTATGAAGAGGTAGCAGGGAAGAAAACACTGACTTGACATGGCATAGGC  250

seq1  TTTGAAAATTCAAAGGAGACCTACAGTGACACCCTTCCTCCAATAAGGTC  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTGAAAATTCAAAGGAGACCTACAGTGACACCCTTCCTCCAATAAGGTC  300

seq1  AATCTTTCTAATCCTTCTAATCCTTTTAAAGAGTTCCCATCCAAACTTTG  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATCTTTCTAATCCTTCTAATCCTTTTAAAGAGTTCCCATCCAAACTTTG  350

seq1  TCTCTGCAACTCGTTCCATGAATATTTTATTCCCTCATCTAGGGAGGAAT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTCTGCAACTCGTTCCATGAATATTTTATTCCCTCATCTAGGGAGGAAT  400

seq1  GGAATATCCACACTTTGGTCTTCCTTCTTGATTTTCTTGTGTTTTGGAAG  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGAATATCCACACTTTGGTCTTCCTTCTTGATTTTCTTGTGTTTTGGAAG  450

seq1  TTGTAAGTTGGGTATTCTAGGTTTCCGGACTAATATCCACTTATCAGTGG  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGTAAGTTGGGTATTCTAGGTTTCCGGACTAATATCCACTTATCAGTGG  500

seq1  GTACATATCAAATGACTTCTTTTTT  525
      |||||||||||||||||||||||||
seq2  GTACATATCAAATGACTTCTTTTTT  525


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