BAC Information

Click to search

BAC

Clone NameB6Ng01-269I05
ChromosomeX (Build37)
Map Location 73,142,498 - 73,143,630
singlet/doubletsinglet
Overlap geneLOC635275
Upstream geneLOC667437, EG667446, LOC669291, Gab3, Dkc1, Mpp1, EG547412, 4930428E23Rik, EG667190, F8, LOC572559, LOC667218, Fundc2, Mtcp1, Brcc3, LOC667496, Vbp1, Rab39b, EG635243, Pls3
Downstream geneEG635295, LOC667537, LOC385472, LOC100041147, EG238829, Magea7, 4930428D18Rik, EG544974, 4930468A15Rik
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-269I05.bB6Ng01-269I05.g
ACCGA072091GA072092
length1,1281,167
definitionB6Ng01-269I05.b B6Ng01-269I05.g
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattcaaattgatattcaatttaaacattcttctttacttggaattcat
ttaaaacatgaatcatgattatgtatcccatagctgcccagataagacac
caaaacccaagcaacaataagagaacagctttctgaagcaaacaggacat
gagtgccaagttcaggcaacagactccaccatgtaccatagctgtattct
gtatgggtatgtcatgttctcgaagtcttagacacgctgctggaaatctg
catagaacatgaaaactcattacttacagaatggactctcactgaatgaa
ctggcagggtgctggggttacaaagaaaaaggaagcatttttttccagaa
aagatccagttgttaagtaggatggccacatagccacatgactgtaagtg
aaaggatatattaaagatcatggaggaaaatgtgcttgcatggagatgta
aaaatgttgatttttggtttgttgacagctaagcaaacatttagttacca
tggaaaatccaaccacagagattactttaagagttacttagtagaaataa
ctgaaaacagaaattataaatagaacagtatcagttagtacaatttttaa
attggaaaacctactaataaaaagtgtacatattttaaatttataaaaga
ctttgtgcttttgagaatgttataaattatgtatcaattttctctgcaaa
aacaaagcttgcatttctaattatgaataaaatcctataagacatttgga
aaaattacagtactctgaataagcattcaatgagtccaatttttgagatg
ctgagcacttccaaatattcagaggatctctacacataacaagcataagg
cttagggctaaaaatggaagtcagctggttgagcactgagttcaaatcca
ccaccacataaaattgtttgtgttaatacacacctgcaatactcatgcct
ccaaagatagacgtagaaaggtcaaaattcaatgtcatccttggctacag
acaacttaagccagccaagactatgtgaaaccctgcctccaaaaaataca
ttaatatacgatgacgaagccactgatttgtttttggaaaatacttagtt
agtccaaggtttaaaatagcatgcaaaa
gaattctcacctgaggaatacagaatggcagagaagcacctggaaaaatg
ttcaacatccttaatcatcagggaaatgcaaatcaaaacaaccctgagat
tccacctcacaccagtcagaatggctaagatcaaaaattcaggtgacagc
agatgctggcgaggatgtggagaaagaggaacactcctccattgttagtg
ggattgcaagcttgtacaacgattctggaaatcagtctggaggttcctta
gaaaattggacataatactactggaggatccagcaatacctctcctgggc
acatatccagaagacgccccaactggtaagaaggacatatgctccactat
gttcatagcagccttatttataatagccagaagttggaaagaaaccagat
gtccctcaacagaggaatggatacagaaaatgtggtacatttacacaatg
gagtactactaaactattaaaaacaatgaatttattaacttcctaggcaa
atggatggatctggagggtatcatcctgagtgaggtaacccagtcacaaa
agaactcacatgatatgcactcactgataagtagatattagcccagaaac
ttagaatacccaagataaactttgcaaaacacatgaaactcaaaaagaat
gaagaccaaagtgtggacacttcaccccttcttagaattgggaacaaaac
acccatggaaggagttacagagacaaagtttggagctgagacgaaaggag
ggaccatccagagactgccccacccgggggtccatctcataatcagccac
caaacacagacactattgcatatgccagcaagattttgctgaaaggaccc
tgatatagctgtcttgtatgaggctatgccagtgcctggcaaacacagaa
gtggatgctcacagtcagctattggatggaacacagggcccccaatgaag
gagctagagaaagtacccagagctgaagggtctgcaaccctataaggtgg
aacaacatagaactacagtacccccagatcttgtgtctctagctgcgtat
gtagcagaagatgctagtcagcatcatggggaagagagcccctggatctg
ctactttatattgccagtacaagaccaggccagatggatgaattggctag
gggaagccgtgaccatg
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chrX_73142498_73143630
seq2: B6Ng01-269I05.b_45_1172 (reverse)

seq1  TTTTCCATGCCTTATTTT-AACTTTGAATTACCTAAGTATTTTTCAAAAA  49
      |||| |||||  |||||| ||| ||| | || ||||||||||| ||||||
seq2  TTTTGCATGC--TATTTTAAACCTTGGACTAACTAAGTATTTTCCAAAAA  48

seq1  CAAATCAGTGCCTTCCTTCATCGTATATTAATGTA-TTTTTGGAGGCAGG  98
      |||||||||| ||| | |||||||||||||||||| ||||||||||||||
seq2  CAAATCAGTGGCTT-CGTCATCGTATATTAATGTATTTTTTGGAGGCAGG  97

seq1  GTTTCACATAGTCTTGGCTGGCTTAAAGTTTGTTCTGTAGCCAAGGATGA  148
      |||||||||||||||||||||||| |||||   |||||||||||||||||
seq2  GTTTCACATAGTCTTGGCTGGCTT-AAGTT--GTCTGTAGCCAAGGATGA  144

seq1  CATTGAATTTTGACCTTTCTACGTCTATCTTTGGAGGCATGAGTATTGCA  198
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATTGAATTTTGACCTTTCTACGTCTATCTTTGGAGGCATGAGTATTGCA  194

seq1  GGTGTGTATTAACACAAACAATTTTATGTGGTGGTGGATTTTGAACTCAG  248
      |||||||||||||||||||||||||||||||||||||| |||||||||||
seq2  GGTGTGTATTAACACAAACAATTTTATGTGGTGGTGGA-TTTGAACTCAG  243

seq1  TGCTCAACCAGCTGACTTCCATTTTTAGCCCTAAGCCTTATGCTTGTTAT  298
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCTCAACCAGCTGACTTCCATTTTTAGCCCTAAGCCTTATGCTTGTTAT  293

seq1  GTGTAGAGATCCTCTGAATATTTGGAAGTGCTCAGCATCTCAAAAATTGG  348
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGTAGAGATCCTCTGAATATTTGGAAGTGCTCAGCATCTCAAAAATTGG  343

seq1  ACTCATTGAATGCTTATTCAGAGTACTGTAATTTTTCCAAATGTCTTATA  398
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTCATTGAATGCTTATTCAGAGTACTGTAATTTTTCCAAATGTCTTATA  393

seq1  GGATTTTATTCATAATTAGAAATGCAAGCTTTGTTTTTGCAGAGAAAATT  448
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGATTTTATTCATAATTAGAAATGCAAGCTTTGTTTTTGCAGAGAAAATT  443

seq1  GATACATAATTTATAACATTCTCAAAAGCACAAAGTCTTTTATAAATTTA  498
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATACATAATTTATAACATTCTCAAAAGCACAAAGTCTTTTATAAATTTA  493

seq1  AAATATGTACACTTTTTATTAGTAGGTTTTCCAATTTAAAAATTGTACTA  548
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAATATGTACACTTTTTATTAGTAGGTTTTCCAATTTAAAAATTGTACTA  543

seq1  ACTGATACTGTTCTATTTATAATTTCTGTTTTCAGTTATTTCTACTAAGT  598
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTGATACTGTTCTATTTATAATTTCTGTTTTCAGTTATTTCTACTAAGT  593

seq1  AACTCTTAAAGTAATCTCTGTGGTTGGATTTTCCATGGTAACTAAATGTT  648
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACTCTTAAAGTAATCTCTGTGGTTGGATTTTCCATGGTAACTAAATGTT  643

seq1  TGCTTAGCTGTCAACAAACCAAAAATCAACATTTTTACATCTCCATGCAA  698
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCTTAGCTGTCAACAAACCAAAAATCAACATTTTTACATCTCCATGCAA  693

seq1  GCACATTTTCCTCCATGATCTTTAATATATCCTTTCACTTACAGTCATGT  748
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCACATTTTCCTCCATGATCTTTAATATATCCTTTCACTTACAGTCATGT  743

seq1  GGCTATGTGGCCATCCTACTTAACAACTGGATCTTTTCTGGAAAAAAATG  798
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGCTATGTGGCCATCCTACTTAACAACTGGATCTTTTCTGGAAAAAAATG  793

seq1  CTTCCTTTTTCTTTGTAACCCCAGCACCCTGCCAGTTCATTCAGTGAGAG  848
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTCCTTTTTCTTTGTAACCCCAGCACCCTGCCAGTTCATTCAGTGAGAG  843

seq1  TCCATTCTGTAAGTAATGAGTTTTCATGTTCTATGCAGATTTCCAGCAGC  898
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCATTCTGTAAGTAATGAGTTTTCATGTTCTATGCAGATTTCCAGCAGC  893

seq1  GTGTCTAAGACTTCGAGAACATGACATACCCATACAGAATACAGCTATGG  948
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGTCTAAGACTTCGAGAACATGACATACCCATACAGAATACAGCTATGG  943

seq1  TACATGGTGGAGTCTGTTGCCTGAACTTGGCACTCATGTCCTGTTTGCTT  998
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACATGGTGGAGTCTGTTGCCTGAACTTGGCACTCATGTCCTGTTTGCTT  993

seq1  CAGAAAGCTGTTCTCTTATTGTTGCTTGGGTTTTGGTGTCTTATCTGGGC  1048
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGAAAGCTGTTCTCTTATTGTTGCTTGGGTTTTGGTGTCTTATCTGGGC  1043

seq1  AGCTATGGGATACATAATCATGATTCATGTTTTAAATGAATTCCAAGTAA  1098
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCTATGGGATACATAATCATGATTCATGTTTTAAATGAATTCCAAGTAA  1093

seq1  AGAAGAATGTTTAAATTGAATATCAATTTGAATTC  1133
      |||||||||||||||||||||||||||||||||||
seq2  AGAAGAATGTTTAAATTGAATATCAATTTGAATTC  1128