BAC Information

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BAC

Clone NameB6Ng01-273E06
ChromosomeX (Build37)
Map Location 107,656,027 - 107,657,231
singlet/doubletsinglet
Overlap genenone
Upstream geneLOC245573, EG634340
Downstream geneLOC668530, LOC100043316, Pou3f4, Cylc1, LOC100042872, Rps6ka6
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-273E06.bB6Ng01-273E06.g
ACCGA074883GA074884
length1,1901,164
definitionB6Ng01-273E06.b B6Ng01-273E06.g
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattctagtgtgtgtgtgaatatataggggataatagaggtaaaatgcc
ctcactcctctaacataggtgatagagtcacagctgctggaatgtctgat
ctcagctaaagaagtgttttgttttgtttctgtttctgtttccttcccat
atattcatggaatggcagtgagccaaatcggacttaatctgtgtcaaaac
caggtgttcttttcatgagcatacatactgcaaggttttgaatatcttca
acacaagagatcattaaacaaataaaacagtctttattcccaagggggaa
aaacaaaggttagaaatagggtctataatggtaggagtaccagagaagaa
ctttgtatgaccacaagagagtggtttaaccttcattaattgaactaaaa
gacattcttttcctgctaagcctcaatttcactgcagaaaagacgtattt
aagggctgtggcctagcccatctttctcacatttcatgcccacaatagca
acttcaaagccaaatcttgccttactggaatcagtaaccacagagaatat
tgggtgtgttggaattgccatatatagacagagccatttatatgtatttt
ggttgtgtcaatttcttgccctttgccaaaataattgggcataatgtttt
cactgttcataacctgattgaacttagcaagaaaactttctccattttta
gttttacattctgatagtacacatgaagaacatagacaactgagtaatgg
ctacagcccatagaaatgaataagggaagctgagtaacttgagtccttga
tcttgtttaagaaattgtggcaactgttgcaaccaaagattgcccctgaa
tcacaggccataaacagaatgacaatttcaagtcacaagcataaaggtca
cagtttcacttactggctggttcaactgacactaatctgaatgctgctta
cagggtgcagagctgaaaatagatgaggagaagcaagtgaaacatcacag
gacccaaagaggcctttgatgctatcagatagcagactcagctctgcagt
gtaaagtccacaaatctttgagatgaatgtttgtgcagattatctgacac
ctctaactcagaggctaacgaaccacagttgacctgtctgctaatagtaa
ggttaaccttggccactcttcctttgaccgtaaaatctac

gaattctcacctgaggaataccgaatggcagagaagcacctgaaaaaatg
ttcaacatccttaatcatcagggaaatgcaaatcaaaacaaccctgagat
tccacctcacaccagtcagaatggctaagatcaaaaattcaggtgacagc
ggatgctggcgtggatgtggagaaagaggaacactcctccattgttggtg
ggagtgcaggcttgtacaaccactctggaaatcagtctggcggttcctca
gaaaactggacatagtactaccggaggatccagcaatacctctcctgggc
atatatccagaagatgccccaactggtaagaaggacatatgctccactat
gttcatagcagccttatttataatagccagaagctggaaagaacccagat
gcccctcaacagaggaatggatacagaaaatgtggtacatctacacaatg
gagtactactcagctattaaaaagaatgaatttatgaaattcctagccaa
atggatggacctggagggcatcatcctgagtgaggtaacacattcacaaa
ggaactcacacaatatgtactcactgataagtggatattagcccaaaacc
taggatacccaagatataagatacaatttcctaaacacatgaaacccaag
aaaaatgaatactgaagtgtggacactatgcccctccttagaagtgggaa
caaaacacccttggaaggagttacagagacaaagtttggagctgagatga
aaggatggcccatgtagagactgccatatccagggatccaccccataatc
agcatccaaacgctgacaccattgcatacactagcaagattttatcgaaa
ggacccagatgtagctgtctcttgtgagactatgcccggggcctagcaaa
cacagaagtggatgctcacagtcagctaatgatggatcacaggcttccca
atggaggaagctagaagaaaggtaccaggaagctaaaggaatctgcaacc
tataggtgatcacattatgactaaccagtatccggagccctgactctagc
tgcatataatcaaaggatggctagtcgtcatcacttgtaagaaagtttat
tgaactcaacttaatgcctgactggcacgtcaggtctaatggggctgcgg
tgctagcggaatac
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chrX_107656027_107657231
seq2: B6Ng01-273E06.b_42_1231

seq1  GAATTCTAGTGTGTGTGTGAATATATAGGGGATAATAGAGGTAAAATGCC  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTAGTGTGTGTGTGAATATATAGGGGATAATAGAGGTAAAATGCC  50

seq1  CTCACTCCTCTAACATAGGTGATAGAGTCACAGCTGCTGGAATGTCTGAT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCACTCCTCTAACATAGGTGATAGAGTCACAGCTGCTGGAATGTCTGAT  100

seq1  CTCAGCTAAAGAAGTGTTTTGTTTTGTTTCTGTTTCTGTTTCCTTCCCAT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCAGCTAAAGAAGTGTTTTGTTTTGTTTCTGTTTCTGTTTCCTTCCCAT  150

seq1  ATATTCATGGAATGGCAGTGAGCCAAATCGGACTTAATCTGTGTCAAAAC  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATATTCATGGAATGGCAGTGAGCCAAATCGGACTTAATCTGTGTCAAAAC  200

seq1  CAGGTGTTCTTTTCATGAGCATACATACTGCAAGGTTTTGAATATCTTCA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGGTGTTCTTTTCATGAGCATACATACTGCAAGGTTTTGAATATCTTCA  250

seq1  ACACAAGAGATCATTAAACAAATAAAACAGTCTTTATTCCCAAGGGGGAA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACACAAGAGATCATTAAACAAATAAAACAGTCTTTATTCCCAAGGGGGAA  300

seq1  AAACAAAGGTTAGAAATAGGGTCTATAATGGTAGGAGTACCAGAGAAGAA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAACAAAGGTTAGAAATAGGGTCTATAATGGTAGGAGTACCAGAGAAGAA  350

seq1  CTTTGTATGACCACAAGAGAGTGGTTTAACCTTCATTAATTGAACTAAAA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTTGTATGACCACAAGAGAGTGGTTTAACCTTCATTAATTGAACTAAAA  400

seq1  GACATTCTTTTCCTGCTAAGCCTCAATTTCACTGCAGAAAAGACGTATTT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GACATTCTTTTCCTGCTAAGCCTCAATTTCACTGCAGAAAAGACGTATTT  450

seq1  AAGGGCTGTGGCCTAGCCCATCTTTCTCACATTTCATGCCCACAATAGCA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGGGCTGTGGCCTAGCCCATCTTTCTCACATTTCATGCCCACAATAGCA  500

seq1  ACTTCAAAGCCAAATCTTGCCTTACTGGAATCAGTAACCACAGAGAATAT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTTCAAAGCCAAATCTTGCCTTACTGGAATCAGTAACCACAGAGAATAT  550

seq1  TGGGTGTGTTGGAATTGCCATATATAGACAGAGCCATTTATATGTATTTT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGGTGTGTTGGAATTGCCATATATAGACAGAGCCATTTATATGTATTTT  600

seq1  GGTTGTGTCAATTTCTTGCCCTTTGCCAAAATAATTGGGCATAATGTTTT  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTTGTGTCAATTTCTTGCCCTTTGCCAAAATAATTGGGCATAATGTTTT  650

seq1  CACTGTTCATAACCTGATTGAACTTAGCAAGAAAACTTTCTCCATTTTTA  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACTGTTCATAACCTGATTGAACTTAGCAAGAAAACTTTCTCCATTTTTA  700

seq1  GTTTTACATTCTGATAGTACACATGAAGAACATAGACAACTGAGTAATGG  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTTTACATTCTGATAGTACACATGAAGAACATAGACAACTGAGTAATGG  750

seq1  CTACAGCCCATAGAAATGAATAAGGGAAGCTGAGTAACTTGAGTCCTTGA  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTACAGCCCATAGAAATGAATAAGGGAAGCTGAGTAACTTGAGTCCTTGA  800

seq1  TCTTGTTTAAGAAATTGTGGCAACTGTTGCAACCAAAGATTGCCCCTGAA  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTTGTTTAAGAAATTGTGGCAACTGTTGCAACCAAAGATTGCCCCTGAA  850

seq1  TCACAGGCCATAAACAGAATGACAATTTCAAGTCACAAGCAT-AAGGTCA  899
      |||||||||||||||||||||||||||||||||||||||||| |||||||
seq2  TCACAGGCCATAAACAGAATGACAATTTCAAGTCACAAGCATAAAGGTCA  900

seq1  CAGTTTCACTTACTGGCTGGTTCAACTGACACTAATCTGAATGCTGCTTA  949
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGTTTCACTTACTGGCTGGTTCAACTGACACTAATCTGAATGCTGCTTA  950

seq1  CAGGGTGCAGAGCTGAAAATAGATGAGGAGAAGCAAGTGAAAACATCACA  999
      ||||||||||||||||||||||||||||||||||||||| ||||||||||
seq2  CAGGGTGCAGAGCTGAAAATAGATGAGGAGAAGCAAGTG-AAACATCACA  999

seq1  GGACCCAAAGAGGCCTTTGATGCTATCAAGAATAGCAGAACTCCAGCTCT  1049
      ||||||||||||||||||||||||||||   ||||||| ||| |||||||
seq2  GGACCCAAAGAGGCCTTTGATGCTATCA--GATAGCAG-ACT-CAGCTCT  1045

seq1  GCAGTGTAAAGTCCCACAAATCTTTGAGGATGAATGTTTGTGCAGAATAA  1099
      |||||||||||| |||||||||||||| ||||||||||||||||| || |
seq2  GCAGTGTAAAGT-CCACAAATCTTTGA-GATGAATGTTTGTGCAG-ATTA  1092

seq1  TCTTGACCACTCTAACTCAGAAGCTACCGAAACCACAGTGGACACTGTCC  1149
      || ||||  |||||||||||| |||| || ||||||||| ||| |||| |
seq2  TC-TGACACCTCTAACTCAGAGGCTAACG-AACCACAGTTGAC-CTGT-C  1138

seq1  TGCTTCACTAGTAAGGTTTAAACTTGGCCATCTCTTCCTTGCACCGTAAT  1199
      ||||  | |||||||| |||| |||||||| |||||||||  ||||||| 
seq2  TGCT--AATAGTAAGG-TTAACCTTGGCCA-CTCTTCCTTTGACCGTAAA  1184

seq1  ATCTAC  1205
      ||||||
seq2  ATCTAC  1190


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