BAC Information

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BAC

Clone NameB6Ng01-273N10
ChromosomeX (Build37)
Map Location 104,547,607 - 104,548,711
singlet/doubletsinglet
Overlap genenone
Upstream geneLOC622494, Gm784, Cysltr1, EG331493, LOC668490, LOC100042772, LOC100043263, Zcchc5, Gpr23, P2ry10, A630033H20Rik, Gpr174, LOC668502, LOC622613
Downstream geneLOC385404, Itm2a, 4933401B06Rik, Tbx22, 2610002M06Rik, Gm732
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-273N10.bB6Ng01-273N10.g
ACCGA075303GA075304
length1,1631,108
definitionB6Ng01-273N10.b B6Ng01-273N10.g
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattctcacctgaggaataccaaatggctgagaagcatctgaaaaaatg
ttcaacatccttaatcatcaaggaaatgcaaagcaaaacaaccttgagat
tccacctcacaccagtcagaatgggtaagatcaaaaattcaagtgacagg
agatgctggtgaggatgtggagaaagagaatcactcctccacttctggtg
ggattgcaagcttataaaaccactctctaagtgagtctggaggttcctca
gaaaattggacataatacttctggaagatccagcaatacgtctcctgagg
atatacccagaatttccaactggtaataaggacacatgctccactatgtt
catagcagccttatttataatagccagaagctgtcaaggacccagattcc
ctcaacagaagaatggatacagaaaatgtggtacatttacactgtggagt
atgactcagctattaaaaacactggattgatgaaattcttggacaaatgg
atgtatctggaggatatcatccttagtgaggtaacccaatcacaaaagat
tcattagatatgtactcactgataagtgggtattagccccaaaacataga
acacccaagatacagtttgcaaaacacaagaaaatcaagaagagggaaga
ccaatgggtggatacttcatttctccttagaatagggaacacaataccca
tgaaaggagttatagagacaaagtttggagctaagatgaaaaggtggact
atccagagactaccccaccccgggatccatcccataatcagccaccaaac
ccagacactattgcatatgccagaaagattttgctgaagggaccctgtta
tatctgtctcatatgaggctatgccaatgcctggcaaatacagaagttga
tgctcacagtcatctataagatggaacacaggccccaatggagaagctag
agaaagcacccaagaaactgaagggttctgaaaccctatagtggacacat
atgaactaaccagtaccccagagctcatgtatctagctgcatttgtagag
gagatgctagtctgcatcacaggaagagaggtcccttgtattaagacctt
tatatgctcagtacagagattgctaaggtcctaaaagtgggagttgggtt
gcttataggaatc
gaattctaagactgggaaaagagcaaataatgatttttataaagaaaact
aaatgttgtctacccaaaaggagtggggtcttagaaataatccatcaata
agcttgagttcattccctgaaaatattttaggtacttaaaggcaacagaa
tacacatatgttttaaaaacaatgagcaaaaaagtggggtcatgaaagtg
aaaaacagcaaaaggagatatgaggaggtcttggatggagaaaaaggaaa
gaagaaagggcataatctgatgaaataaaagactatttcataagacaaca
gaaaatcatcaaatgctttatgaaatatactggtcatgtaatattaatta
cttttctgaaatttaattatatggtcttcagataaaaaagtgtttcaatg
ggcaaaatgagtcttggtgttagaacttggacaaatattacaaaatgtat
ctacgtaagtgtactacataaccagcaacagtgtaaatatatttaagtga
tcatgctgttaaacagccacacatgtatgcataaacagatgtatgcatac
acataggggtatatgtgtatatgcattgcatttgttataggcagctgcac
tgtaaacttgtgggtacaaaagtaattgagactctcagtgttttctccag
atcaattaatttacagagataattgtaagaactccattgaaatataagta
tgtccttcagtctctgctctgaactttgtctctctaactccttccatgag
tattttgttcccccttctaagaaggatagaagtatccacacttttctctt
ccttcttcttgagtttcatgtgttttgactgctccacctgaggatctatc
acataaacaaccaccaaacccagacactattatagatgccaacgagagat
cactgacatgagcctgataaagctgtctcctgagaggctctgccagtgcc
tgacaaaatacagaagtggatgctcacagccatccactgggatggagcac
agagtccagatgaaggagcctagaagaaagtacccaagagcttaaagggt
tttcagccttatagaggacaacaatattgagcctacccagttactcccag
agctccct
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chrX_104547607_104548711
seq2: B6Ng01-273N10.g_67_1174

seq1  GAATTCTAAGACTGGGAAAAGAGCAAATAATGATTTTTATAAAGAAAACT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTAAGACTGGGAAAAGAGCAAATAATGATTTTTATAAAGAAAACT  50

seq1  AAATGTTGTCTACCCAAAAGGAGTGGGGTCTTAGAAATAATCCATCAATA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAATGTTGTCTACCCAAAAGGAGTGGGGTCTTAGAAATAATCCATCAATA  100

seq1  AGCTTGAGTTCATTCCCTGAAAATATTTTAGGTACTTAAAGGCAACAGAA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCTTGAGTTCATTCCCTGAAAATATTTTAGGTACTTAAAGGCAACAGAA  150

seq1  TACACATATGTTTTAAAAACAATGAGCAAAAAAGTGGGGTCATGAAAGTG  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACACATATGTTTTAAAAACAATGAGCAAAAAAGTGGGGTCATGAAAGTG  200

seq1  AAAAACAGCAAAAGGAGATATGAGGAGGTCTTGGATGGAGAAAAAGGAAA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAAACAGCAAAAGGAGATATGAGGAGGTCTTGGATGGAGAAAAAGGAAA  250

seq1  GAAGAAAGGGCATAATCTGATGAAATAAAAGACTATTTCATAAGACAACA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAGAAAGGGCATAATCTGATGAAATAAAAGACTATTTCATAAGACAACA  300

seq1  GAAAATCATCAAATGCTTTATGAAATATACTGGTCATGTAATATTAATTA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAAATCATCAAATGCTTTATGAAATATACTGGTCATGTAATATTAATTA  350

seq1  CTTTTCTGAAATTTAATTATATGGTCTTCAGATAAAAAAGTGTTTCAATG  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTTTCTGAAATTTAATTATATGGTCTTCAGATAAAAAAGTGTTTCAATG  400

seq1  GGCAAAATGAGTCTTGGTGTTAGAACTTGGACAAATATTACAAAATGTAT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGCAAAATGAGTCTTGGTGTTAGAACTTGGACAAATATTACAAAATGTAT  450

seq1  CTACGTAAGTGTACTACATAACCAGCAACAGTGTAAATATATTTAAGTGA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTACGTAAGTGTACTACATAACCAGCAACAGTGTAAATATATTTAAGTGA  500

seq1  TCATGCTGTTAAACAGCCACACATGTATGCATAAACAGATGTATGCATAC  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCATGCTGTTAAACAGCCACACATGTATGCATAAACAGATGTATGCATAC  550

seq1  ACATAGGGGTATATGTGTATATGCATTGCATTTGTTATAGGCAGCTGCAC  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACATAGGGGTATATGTGTATATGCATTGCATTTGTTATAGGCAGCTGCAC  600

seq1  TGTAAACTTGTGGGTACAAAAGTAATTGAGACTCTCAGTGTTTTCTCCAG  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTAAACTTGTGGGTACAAAAGTAATTGAGACTCTCAGTGTTTTCTCCAG  650

seq1  ATCAATTAATTTACAGAGATAATTGTAAGAACTCCATTGAAATATAAGTA  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCAATTAATTTACAGAGATAATTGTAAGAACTCCATTGAAATATAAGTA  700

seq1  TGTCCTTCAGTCTCTGCTCTGAACTTTGTCTCTCTAACTCCTTCCATGAG  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTCCTTCAGTCTCTGCTCTGAACTTTGTCTCTCTAACTCCTTCCATGAG  750

seq1  TATTTTGTTCCCCCTTCTAAGAAGGATAGAAGTATCCACACTTTTCTCTT  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATTTTGTTCCCCCTTCTAAGAAGGATAGAAGTATCCACACTTTTCTCTT  800

seq1  CCTTCTTCTTGAGTTTCATGTGTTTTGACTGCTCCACCTGAGGATCTATC  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTTCTTCTTGAGTTTCATGTGTTTTGACTGCTCCACCTGAGGATCTATC  850

seq1  ACATAAACAACCACCAAACCCAGACACTATTATAGATGCCAACGAGAGAT  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACATAAACAACCACCAAACCCAGACACTATTATAGATGCCAACGAGAGAT  900

seq1  CACTGACATGAGCCTGATAAAGCTGTCTCCTGAGAGGCTCTGCCAGTGCC  950
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACTGACATGAGCCTGATAAAGCTGTCTCCTGAGAGGCTCTGCCAGTGCC  950

seq1  TGAC-AAATACAGAAGTGGATGCTCACAGCCATCCACT-GGATGGAGCAC  998
      |||| ||||||||||||||||||||||||||||||||| |||||||||||
seq2  TGACAAAATACAGAAGTGGATGCTCACAGCCATCCACTGGGATGGAGCAC  1000

seq1  AGAGTCCCAGATGAAGGAG-CTAG-AGAAAGTACCCAAGGAGCTAAAGGG  1046
      ||||| ||||||||||||| |||| ||||||||||||| ||||| || ||
seq2  AGAGT-CCAGATGAAGGAGCCTAGAAGAAAGTACCCAA-GAGCTTAAAGG  1048

seq1  GTTTTCAGCCCTATAGGAGGGACAACAATA-TGAG-CTAACCAG-TACCC  1093
      |||||||||| |||||   ||||||||||| |||| ||| |||| ||| |
seq2  GTTTTCAGCCTTATAG--AGGACAACAATATTGAGCCTACCCAGTTACTC  1096

seq1  CCAGAGCTCCCT  1105
      ||||||||||||
seq2  CCAGAGCTCCCT  1108