BAC Information

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BAC

Clone NameB6Ng01-274E18
ChromosomeX (Build37)
Map Location 120,053,123 - 120,154,952
singlet/doubletdoublet
Overlap genenone
Upstream geneLOC100039544, Nap1l3
Downstream gene3110007F17Rik, LOC100039751, LOC100039763, LOC665281, EG625591, LOC665325, EG382265, LOC665364, EG546368
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-274E18.bB6Ng01-274E18.g
ACCGA075635GA075636
length823410
definitionB6Ng01-274E18.b B6Ng01-274E18.g
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(120,154,134 - 120,154,952)(120,053,123 - 120,053,538)
sequence
gaattcactctgtagaccaggctggcctcgaactcagaaatccactacct
ctgcctcccaattactgggattaagtgcaagggccactacttcctggcaa
aactaaaatccttaaacttcaaaaacaataccataaaaataaaaataaaa
aaatctctaaaaaccacacacacacacacacacacacacacacacacaca
cacacaaataaaccttaaaaaaaagaaagataaaactctaaaaaaaactt
taaaaaaaccccaaaactctaaaacaccctagaatccttaaaaaaattcc
aaaaaaacccctaaaaatacactaaaatattgaaaaccaaaaaaaccctc
taaaacactcttctaaaaactctacaaaatccgtatcaaaaacaataaaa
ttaaaaaaaaaaacaaagcaaaaaaaaaccctaaaaacaaacaaacaaac
aaacaaaaaaaacaggacaggaagccaaaatgtccgtaaagtaagtcttt
ctttctttctttctttctttctttctttctttctttctttctttctttct
ttctttctttctttttttcctccttccttccttccttccttctttctttc
tttctttctttctttctttctttctttctctcttttttctttgttttttt
ttttttttttgggggggggggggctgggattgaagactggatttctctgt
gtatttcaggctgtcctggagctccctctgtagaccaggttgggccttga
attatataaatctacctgcctcttcctcccattttctgggattaaaagca
tgggcctttcatttgccttggca

cattctatacctatatgcatagtgataatgctaattggactcagtgaatt
atgtaagaaggaggagggagaaaggaagtgggattggaggaggaggagaa
caacaacaacaaaaaataataaaacaaggacaagaacaagaacaacaaga
acaaatcaagaaggaaaagaaaaagaaggaggatgaggatgatgatgacg
aggaggagtacaacaacaccatcaacaaaagaacaagaagtggaggaggg
gggataggaggaggaaaaatacaaatatgaggaaaaggatgacagaagaa
ggcagaaaagttgagaaatggctatgaggtacaattcacagggaattaca
aggcaggaagggagtggtggatgtgacctaaattttctgtttatacatat
aaaatttcaa
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chrX_120154134_120154952
seq2: B6Ng01-274E18.b_43_865 (reverse)

seq1  TGCC-AGGC-AATG-ATGGCCCTTGCTTTTAATCCCAGAAATTGGGAGGC  47
      |||| |||| |||| | ||||| |||||||||||||||||| ||||||| 
seq2  TGCCAAGGCAAATGAAAGGCCCATGCTTTTAATCCCAGAAAATGGGAGGA  50

seq1  AGAGGCAGGTAGATTTTTTTAATTCAAGG-CCAGCCTGGTCTACAGAGGG  96
      |||||||||||||||| | |||||||||| ||| ||||||||||||||||
seq2  AGAGGCAGGTAGATTTATATAATTCAAGGCCCAACCTGGTCTACAGAGGG  100

seq1  AGCTCCAGGACAGCCAGAAATACACAGAGAAATCCAGTCTTCAATCCCAG  146
      ||||||||||||||| ||||||||||||||||||||||||||||||||||
seq2  AGCTCCAGGACAGCCTGAAATACACAGAGAAATCCAGTCTTCAATCCCAG  150

seq1  CCCCCCCCCCCCCAAAAAAAAAAAAAAAAACAAAGAAAAAAGAGAGAAAG  196
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCCCCCCCCCCCAAAAAAAAAAAAAAAAACAAAGAAAAAAGAGAGAAAG  200

seq1  AAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAGGAAGGAAGGAAGGAA  246
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAGGAAGGAAGGAAGGAA  250

seq1  GGAGGAAAAAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGA  296
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGAGGAAAAAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGA  300

seq1  AAGAAAGAAAGAAAGAAAGAAAGAAAGACTTACTTTACGGACATTTTGGC  346
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGAAAGAAAGAAAGAAAGAAAGAAAGACTTACTTTACGGACATTTTGGC  350

seq1  TTCCTGTCCTGTTTTTTTTGTTTGTTTGTTTGTTTGTTTTTAGGGTTTTT  396
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCCTGTCCTGTTTTTTTTGTTTGTTTGTTTGTTTGTTTTTAGGGTTTTT  400

seq1  TTTTGCTTTGTTTTTTTTTTTAATTTTATTGTTTTTGATACGGATTTTGT  446
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTGCTTTGTTTTTTTTTTTAATTTTATTGTTTTTGATACGGATTTTGT  450

seq1  AGAGTTTTTAGAAGAGTGTTTTAGAGGGTTTTTTTGGTTTTCAATATTTT  496
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAGTTTTTAGAAGAGTGTTTTAGAGGGTTTTTTTGGTTTTCAATATTTT  500

seq1  AGTGTATTTTTAGGGGTTTTTTTGGAATTTTTTTAAGGATTCTAGGGTGT  546
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTGTATTTTTAGGGGTTTTTTTGGAATTTTTTTAAGGATTCTAGGGTGT  550

seq1  TTTAGAGTTTTGGGGTTTTTTTAAAGTTTTTTTTAGAGTTTTATCTTTCT  596
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTAGAGTTTTGGGGTTTTTTTAAAGTTTTTTTTAGAGTTTTATCTTTCT  600

seq1  TTTTTTTAAGGTTTATTTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGT  646
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTTTTAAGGTTTATTTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGT  650

seq1  GTGTGTGTGGTTTTTAGAGATTTTTTTATTTTTATTTTTATGGTATTGTT  696
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGTGTGTGGTTTTTAGAGATTTTTTTATTTTTATTTTTATGGTATTGTT  700

seq1  TTTGAAGTTTAAGGATTTTAGTTTTGCCAGGAAGTAGTGGCCCTTGCACT  746
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTGAAGTTTAAGGATTTTAGTTTTGCCAGGAAGTAGTGGCCCTTGCACT  750

seq1  TAATCCCAGTAATTGGGAGGCAGAGGTAGTGGATTTCTGAGTTCGAGGCC  796
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAATCCCAGTAATTGGGAGGCAGAGGTAGTGGATTTCTGAGTTCGAGGCC  800

seq1  AGCCTGGTCTACAGAGTGAATTC  819
      |||||||||||||||||||||||
seq2  AGCCTGGTCTACAGAGTGAATTC  823


seq1: chrX_120053123_120053538
seq2: B6Ng01-274E18.g_63_478

seq1  GAATTCCATTCTATACCTATATGCATAGTGATAATGCTAATTGGACTCAG  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCCATTCTATACCTATATGCATAGTGATAATGCTAATTGGACTCAG  50

seq1  TGAATTATGTAAGAAGGAGGAGGGAGAAAGGAAGTGGGATTGGAGGAGGA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAATTATGTAAGAAGGAGGAGGGAGAAAGGAAGTGGGATTGGAGGAGGA  100

seq1  GGAGAACAACAACAACAAAAAATAATAAAACAAGGACAAGAACAAGAACA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGAGAACAACAACAACAAAAAATAATAAAACAAGGACAAGAACAAGAACA  150

seq1  ACAAGAACAAATCAAGAAGGAAAAGAAAAAGAAGGAGGATGAGGATGATG  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAAGAACAAATCAAGAAGGAAAAGAAAAAGAAGGAGGATGAGGATGATG  200

seq1  ATGACGAGGAGGAGTACAACAACACCATCAACAAAAGAACAAGAAGTGGA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGACGAGGAGGAGTACAACAACACCATCAACAAAAGAACAAGAAGTGGA  250

seq1  GGAGGGGGGATAGGAGGAGGAAAAAGACAAATATGAGGAAAAGGATGACA  300
      ||||||||||||||||||||||||| ||||||||||||||||||||||||
seq2  GGAGGGGGGATAGGAGGAGGAAAAATACAAATATGAGGAAAAGGATGACA  300

seq1  GAAGAAGGCAGAAAAGTTGAGAAATGGCTATGAGGTACAATTCAAAGGGA  350
      |||||||||||||||||||||||||||||||||||||||||||| |||||
seq2  GAAGAAGGCAGAAAAGTTGAGAAATGGCTATGAGGTACAATTCACAGGGA  350

seq1  ATTAGAAGGCAGGAAGGGAGTGGTGGATGTGACCAAAATATTCTGTTTAT  400
      |||| ||||||||||||||||||||||||||||| |||| ||||||||||
seq2  ATTACAAGGCAGGAAGGGAGTGGTGGATGTGACCTAAATTTTCTGTTTAT  400

seq1  ACATATAAAATTACAA  416
      |||||||||||| |||
seq2  ACATATAAAATTTCAA  416


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