BAC Information

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BAC

Clone NameB6Ng01-274I17
ChromosomeX (Build37)
Map Location 92,604,588 - 92,605,757
singlet/doubletsinglet
Overlap genenone
Upstream geneLOC631145, 0610008C08Rik, EG668148, Maged1, LOC668150, EG385499, EG668156, Gspt2, LOC385500, Zxdb, LOC631331, EG631319, Zxda, Gm371, 9630042H07Rik, Arhgef9, LOC619688, LOC100042189
Downstream gene2810002O09Rik, Asb12, LOC668202, AK129302, A130028J20Rik, 1700010D01Rik, Las1l, Msn, Psmb7-ps1, LOC668221, Vsig4, B230358A15Rik
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-274I17.bB6Ng01-274I17.g
ACCGA075818GA075819
length1,1541,007
definitionB6Ng01-274I17.b B6Ng01-274I17.g
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattcttttttttctttttttctttttttttttagttctctaccccata
ttttatttgtgttatttggattgttggtgagtaactccttgagttcttta
taaatggtgtatattatctctctgtcagatgtagggctgataaagattct
tttccaatctataggcttccatttcatggtattggcagtgtgttttgcct
tacagaagtttttcagtttcatgaagttccctttatcaactgttgatctt
agagcctggggcattggtattctgttcaggagattatctcctgtatcaat
tcgttcaagggtatttcacactttctctgctatcatattttttttttaaa
aagtggcatctgtatgaaagcaagtcaaagccctgtacacactaaagctg
ctgctcctaaaggtgtttagtctgagagtattccaagtgacaagtgacat
gagtcacttcatgtcactgtttccatgtcaatacaaaagccagagccttt
aaaaaatctacaaactccttttaaatttccaagctctagaagaacatctg
tgaattttttttttttacccatcatcactgtcccttcattcactgtgctt
cagcaacactggactcgtgtgtattcctcgaatacattatcagtgcttgc
tacagtgctaaggctcatttctcaaatatgacctgcttagtgagtctttg
ctgaccattttatttaaaatagtgatcatcatgtcttttccttgacttta
ctattcattgtctagtatactctcatttattgtttcccctgagaagccta
aggttcgtgaggggatattttatctttctatttcagcactgcatccacag
tctagaacaacatctggcacgtcagaggcactcaatatttgttggaccaa
agaacactaccctttgccttcagatttggaaacattgtaaatagagaaaa
aaagtagtagtaaaagatttatgtagaccctcagggactcagttaatcac
ttctaactctcaagaagaaactcttcaatacttgttgtcccggagggtga
cagccatagacagagacatcagagtgaccagtcctcaatgacttcttatt
ccttaaattggattcacattgctttgccttggaccagatctttctataca
gtcc
gaattcaaacaaaaatctgagacgtaagctttacctagtacagcacagga
aatggaagagagaatctcaggcattgaagacaagatagaaaaaaatagat
atctcagacaaaaaagttgttaaaagaaattcagacacaaaccatccaag
aaatctgggaaaaagtcgggaagtggtggcgcatgcctttagtcccagca
attgggaggcagaggcaggaagatttctgagttagaggccagcctggtct
acagagtgagttccaggacaggcagggatatatagagaaaccctgtccaa
acaaaacaaaacaaaacaaaacaaaacaaaacaaaaaccaaaaaccaaaa
accaaaaaccaaaaaccaaaccaaaaccagaaaaacccccaaatcttcga
aactatgaatgaaaagaccaaatcaatgaattataggaacataagatgga
gaaggaacctacatcaaaggcacagaatatattttcaacaaaatcataga
agaaaaaatttctgacctaaagaaggaggtgcttaccaaggaacaataag
cctatagaacaccaaacagactgggtgagaaaatgaatttcacagacaca
tagtaatcgaaacacaaaatgtttagaacaaagaaaaatttaaacactac
aatggaataagaacaagtaatatgtaaaggaagacccattagtatagaac
ctgatttctcagtgaagaccctacaaaccaaaagggcctggatggatttc
ctacaagtacaaagagaccacagagccagcaaaacttctaatcacaatac
atggaaaaagaaaaatattccataataaaataaaatttaagcattatcta
tttataagtacatttctacaaaagtacttactttatttgcagatatgatt
gtatatagaaactaccctaattcctcacctatctgtggctgatgaacatt
tttttttcaaggtagcatcctatatacaactgacaatggaattgaaaaag
aatcagg
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chrX_92604588_92605757
seq2: B6Ng01-274I17.b_40_1193

seq1  GAATTCTTTTTTTTCTTTTTTTCTTTTTTTTTTTAGTTCTCTACCCCATA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTTTTTTTTCTTTTTTTCTTTTTTTTTTTAGTTCTCTACCCCATA  50

seq1  TTTTATTTGTGTTATTTGGATTGTTGGTGAGTAACTCCTTGAGTTCTTTA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTATTTGTGTTATTTGGATTGTTGGTGAGTAACTCCTTGAGTTCTTTA  100

seq1  TAAATGGTGTATATTATCTCTCTGTCAGATGTAGGGCTGATAAAGATTCT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAATGGTGTATATTATCTCTCTGTCAGATGTAGGGCTGATAAAGATTCT  150

seq1  TTTCCAATCTATAGGCTTCCATTTCATGGTATTGGCAGTGTGTTTTGCCT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTCCAATCTATAGGCTTCCATTTCATGGTATTGGCAGTGTGTTTTGCCT  200

seq1  TACAGAAGTTTTTCAGTTTCATGAAGTTCCCTTTATCAACTGTTGATCTT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACAGAAGTTTTTCAGTTTCATGAAGTTCCCTTTATCAACTGTTGATCTT  250

seq1  AGAGCCTGGGGCATTGGTATTCTGTTCAGGAGATTATCTCCTGTATCAAT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAGCCTGGGGCATTGGTATTCTGTTCAGGAGATTATCTCCTGTATCAAT  300

seq1  TCGTTCAAGGGTATTTCACACTTTCTCTGCTATCATATTTTTTTTTTAAA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCGTTCAAGGGTATTTCACACTTTCTCTGCTATCATATTTTTTTTTTAAA  350

seq1  AAGTGGCATCTGTATGAAAGCAAGTCAAAGCCCTGTACACACTAAAGCTG  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGTGGCATCTGTATGAAAGCAAGTCAAAGCCCTGTACACACTAAAGCTG  400

seq1  CTGCTCCTAAAGGTGTTTAGTCTGAGAGTATTCCAAGTGACAAGTGACAT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGCTCCTAAAGGTGTTTAGTCTGAGAGTATTCCAAGTGACAAGTGACAT  450

seq1  GAGTCACTTCATGTCACTGTTTCCATGTCAATACAAAAGCCAGAGCCTTT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGTCACTTCATGTCACTGTTTCCATGTCAATACAAAAGCCAGAGCCTTT  500

seq1  AAAAAATCTACAAACTCCTTTTAAATTTCCAAGCTCTAGAAGAACATCTG  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAAAATCTACAAACTCCTTTTAAATTTCCAAGCTCTAGAAGAACATCTG  550

seq1  TGAATTTTTTTTTTTTACCCATCATCACTGTCCCTTCATTCACTGTGCTT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAATTTTTTTTTTTTACCCATCATCACTGTCCCTTCATTCACTGTGCTT  600

seq1  CAGCAACACTGGACTCGTGTGTATTCCTCGAATACATTATCAGTGCTTGC  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGCAACACTGGACTCGTGTGTATTCCTCGAATACATTATCAGTGCTTGC  650

seq1  TACAGTGCTAAGGCTCATTTCTCAAATATGACCTGCTTAGTGAGTCTTTG  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACAGTGCTAAGGCTCATTTCTCAAATATGACCTGCTTAGTGAGTCTTTG  700

seq1  CTGACCATTTTATTTAAAATAGTGATCATCATGTCTTTTCCTTGACTTTA  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGACCATTTTATTTAAAATAGTGATCATCATGTCTTTTCCTTGACTTTA  750

seq1  CTATTCATTGTCTAGTATACTCTCATTTATTGTTTCCCCTGAGAAGCCTA  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTATTCATTGTCTAGTATACTCTCATTTATTGTTTCCCCTGAGAAGCCTA  800

seq1  AGGTTCGTGAGGGGATATTTTATCTTTCTATTTCAGCACTGCATCCACAG  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGTTCGTGAGGGGATATTTTATCTTTCTATTTCAGCACTGCATCCACAG  850

seq1  TCTAGAACAACATCTGGCACGTCAGAGGCACTCAATATTTGTTGGACCAA  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTAGAACAACATCTGGCACGTCAGAGGCACTCAATATTTGTTGGACCAA  900

seq1  AGAACACTA-CCTTTGCCTTCAGATTTGGAAACATTGTAAATAGAGAAAA  949
      ||||||||| |||||||||||||||||||||||||||||||||||| |||
seq2  AGAACACTACCCTTTGCCTTCAGATTTGGAAACATTGTAAATAGAG-AAA  949

seq1  AAAAGTAGGTAGTAAAAGAATTTATGTAGACCC-CAGGGACTCAGTTAAA  998
      ||||||| |||||||||| |||||||||||||| ||||||||||||| ||
seq2  AAAAGTA-GTAGTAAAAG-ATTTATGTAGACCCTCAGGGACTCAGTT-AA  996

seq1  TCACTTCTAACTCTTCAAGAAGAAAACTTCTCCAATAACCTGTGTCCCCG  1048
      ||||||||||||| |||||||||||   ||| |||| || |||   ||||
seq2  TCACTTCTAACTC-TCAAGAAGAAA--CTCTTCAAT-ACTTGTTGTCCCG  1042

seq1  GAGGTGAACAGGCATAGGACAGAGACATCAGAAGTGAACAGGTCCTCAAT  1098
      ||||   |||| |||| |||||||||||||| ||||| || |||||||||
seq2  GAGGGTGACAGCCATA-GACAGAGACATCAG-AGTGACCA-GTCCTCAAT  1089

seq1  AGACTTCTTATTCTTTTATTTGATTTTCACATTTGCTTTTGTCTTTTGAA  1148
       |||||||||||| || | |||   |||||| |||| |||| |  ||| |
seq2  -GACTTCTTATTCCTTAAATTG-GATTCACA-TTGC-TTTGCC--TTGGA  1133

seq1  GCAGGATCTTTCTATACAGTCC  1170
       || ||||||||||||||||||
seq2  CCA-GATCTTTCTATACAGTCC  1154