BAC Information

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BAC

Clone NameB6Ng01-275K11
ChromosomeX (Build37)
Map Location 92,088,353 - 92,089,454
singlet/doubletsinglet
Overlap genenone
Upstream geneEG668103, LOC100042041, AU015836, EG245516, LOC100042062, EG629591, Zfx, Eif2s3x, Klhl15, LOC385495, LOC670263, LOC100042098, LOC631145, 0610008C08Rik, EG668148, Maged1, LOC668150, EG385499, EG668156, Gspt2, LOC385500, Zxdb, LOC631331, EG631319, Zxda
Downstream geneGm371, 9630042H07Rik, Arhgef9, LOC619688, LOC100042189, 2810002O09Rik, Asb12, LOC668202, AK129302, A130028J20Rik, 1700010D01Rik
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-275K11.bB6Ng01-275K11.g
ACCGA076633GA076634
length1,1001,213
definitionB6Ng01-275K11.b B6Ng01-275K11.g
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattctctcacacagaggattccaccaggagtgcaggacttgggtcaag
cctcctgcttccaattcctatttagcagattactgtcactagttttccac
taattcccacatgattagtaaaataacaacttagaagctctgtcgttgtt
gttgctgtgtgtttgattgttttctagatgaattgagtcctcacatggac
ctacaggacaaggaaaagcagaatgcagtctcctccttctctactgtggc
tgaaggaacagggatgccttaacctttcctccagtcgccttgtgtagcag
gagcagcagaaccactcgggcagaccattgtccccagaagaagtttgtca
tccaggaaaatgagggccacaacgggaggggaaattgtcctctcctagga
gcctggttgacctcctccagctatgagagctaaggactcagaacaccttg
aaagacaggaaatgcttcattggtgtgcaggaccactgctacccagcact
tcttactcatgaatgcctcttaccccagcccatcactctcctctatgcac
atctcaggctcatcgtcagtaactccaggctgggctggtagtcaatggaa
gcctgcatttcttttttttttctttttattattaattatttttatttgtt
tacatttcttttttttccatttttattaggtatttagctcatttacattt
acaatgctataccaaaagtcccccatacccacccacccccactcccctac
ccacccactccccctttttggccctggcgttcccctgtactgaggcatat
aaagtgtgttccaccccgcaagggcccacacaggattccccacgggatcc
taagaccttctggtgagtggaacacagcaccggccccaatccaatcaagc
ggaaccttgagactgcgtacatagggaagcagactaccccgggcctgacc
tggggcacaagccccttcgctcactcgagccccgggctactttgcagcgg
agtggcttgacacccgccaaggtccacacaggattcccacggaatcttaa
gaacctgctggtgagtgacggtagcctgcatctcctaagctccgatcatg

gaattcagcatagcgacacactattggcttattcaaacattaacagaaag
attacagggcatctggactttgttcctgtgggctgggggcttatctttgt
tcacatagcaaccagttgatgtatgactttacctggagccaagggacaat
agacgggggggaggttccggccaaaatgtgtcgactctgacaagatagcc
ttgcctgcgtccttgcattctttttcatctttacagccaagagccctgcc
ctggcatccgggctcatggacaactcttttacatgaatcacaagttacaa
aatctcattttccttcatgatcactaaggactttgaacatttctttactt
gtttctcagccatttgagatttctcagtcgtgaattcttggtttagttct
ataccccatttttatcccattttttgattgggttgtttgtttgtttgtgg
gtttttttttttttttggtgattaacttctcgagttctttatatattttg
gaaattagctctctatcaaatgtgcggataggagagttttcccaatcagt
aggtttgtctttatcgactatgtcctttgccttacagaagctttccagtt
ttatgaggtcccattaatcaatttttgatcttgaagcatgagccattgga
gttctgtttaggaaatttccccctgggccaatgtgttcaagactctcact
ttctcttctattagattcagtgtatctggatttatgttgcggtccttgat
ccacttggacttgaactttgtacatgtgacaaatacggtcctattttcat
ttgtctacatacagatagccagttagaccagcaccattcatttgaaagat
tgctttcttttttccattgtatatttttgggcattctttgtcaaaggtaa
agtgaccagtaaatgtgtggtttttattttctgggtcttccaattctatt
ccattgatcaacatggtctggtccttggttccagtaccatgcaacttttt
tattcacctactggcttctatagtaaagctttgaagggtggaggaagggt
gatttcccccagtctggtcccttttacttgtttaaaaaattggttttttg
tcatttctgggtgtgttttccttatcccgggaagtgatattttgcgaaaa
ttctctcttttcaatggtccctccaacaattaattgttgcatggggcagt
gatttggttagaa
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chrX_92088353_92089454
seq2: B6Ng01-275K11.b_46_1145 (reverse)

seq1  CATGATCGGGAAGCTTTAGAAATGCAGGCTACGTTCCACTCACCAG-AGG  49
      |||||||||  |||||  || |||||||||||  | |||||||||| |||
seq2  CATGATCGG--AGCTTAGGAGATGCAGGCTACCGT-CACTCACCAGCAGG  47

seq1  -TCTTAGGATCCCGTGGGGAATCCTGTGTGGGCCCTGGCGGGTGTCAGGC  98
       ||||| ||| |||| ||||||||||||||| || |||||||||||| ||
seq2  TTCTTAAGATTCCGT-GGGAATCCTGTGTGGACCTTGGCGGGTGTCAAGC  96

seq1  AACTCCGCTGGCAAGGTAGCCCGGGGCTCGAGTGGAGCGGAAGGGGCTTG  148
       |||||||| |||| |||||||||||||||||| |||| |||||||||||
seq2  CACTCCGCT-GCAAAGTAGCCCGGGGCTCGAGT-GAGC-GAAGGGGCTTG  143

seq1  TGCCCCAGGTCAGGCCC-GGGTAGTCTGCTTCCCTATGTACCGCAGTCTC  197
      ||||||||||||||||| |||||||||||||||||||||| |||||||||
seq2  TGCCCCAGGTCAGGCCCGGGGTAGTCTGCTTCCCTATGTA-CGCAGTCTC  192

seq1  -AGGTTCCGCTTGATTGGATTGGGGCCGGTGCTGTGTTCCACTCACCAG-  245
       |||||||||||||||||||||||||||||||||||||||||||||||| 
seq2  AAGGTTCCGCTTGATTGGATTGGGGCCGGTGCTGTGTTCCACTCACCAGA  242

seq1  AGGTCTTAGGATCCCGTGGGGAATCCTGTGTGGGCCCTTGC-GGGTGGAA  294
      ||||||||||||||||||||||||||||||||||||||||| ||||||||
seq2  AGGTCTTAGGATCCCGTGGGGAATCCTGTGTGGGCCCTTGCGGGGTGGAA  292

seq1  CACACTTTATATGCCTCAGTACAGGGGAACGCCAGGGCCAAAAAGGGGGA  344
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACACTTTATATGCCTCAGTACAGGGGAACGCCAGGGCCAAAAAGGGGGA  342

seq1  GTGGGTGGGTAGGGGAGTGGGGGTGGGTGGGTATGGGGGACTTTTGGTAT  394
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGGGTGGGTAGGGGAGTGGGGGTGGGTGGGTATGGGGGACTTTTGGTAT  392

seq1  AGCATTGTAAATGTAAATGAGCTAAATACCTAATAAAAATGGAAAAAAAA  444
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCATTGTAAATGTAAATGAGCTAAATACCTAATAAAAATGGAAAAAAAA  442

seq1  GAAATGTAAACAAATAAAAATAATTAATAATAAAAAGAAAAAAAAAAGAA  494
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAATGTAAACAAATAAAAATAATTAATAATAAAAAGAAAAAAAAAAGAA  492

seq1  ATGCAGGCTTCCATTGACTACCAGCCCAGCCTGGAGTTACTGACGATGAG  544
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGCAGGCTTCCATTGACTACCAGCCCAGCCTGGAGTTACTGACGATGAG  542

seq1  CCTGAGATGTGCATAGAGGAGAGTGATGGGCTGGGGTAAGAGGCATTCAT  594
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTGAGATGTGCATAGAGGAGAGTGATGGGCTGGGGTAAGAGGCATTCAT  592

seq1  GAGTAAGAAGTGCTGGGTAGCAGTGGTCCTGCACACCAATGAAGCATTTC  644
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGTAAGAAGTGCTGGGTAGCAGTGGTCCTGCACACCAATGAAGCATTTC  642

seq1  CTGTCTTTCAAGGTGTTCTGAGTCCTTAGCTCTCATAGCTGGAGGAGGTC  694
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGTCTTTCAAGGTGTTCTGAGTCCTTAGCTCTCATAGCTGGAGGAGGTC  692

seq1  AACCAGGCTCCTAGGAGAGGACAATTTCCCCTCCCGTTGTGGCCCTCATT  744
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACCAGGCTCCTAGGAGAGGACAATTTCCCCTCCCGTTGTGGCCCTCATT  742

seq1  TTCCTGGATGACAAACTTCTTCTGGGGACAATGGTCTGCCCGAGTGGTTC  794
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCCTGGATGACAAACTTCTTCTGGGGACAATGGTCTGCCCGAGTGGTTC  792

seq1  TGCTGCTCCTGCTACACAAGGCGACTGGAGGAAAGGTTAAGGCATCCCTG  844
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCTGCTCCTGCTACACAAGGCGACTGGAGGAAAGGTTAAGGCATCCCTG  842

seq1  TTCCTTCAGCCACAGTAGAGAAGGAGGAGACTGCATTCTGCTTTTCCTTG  894
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCCTTCAGCCACAGTAGAGAAGGAGGAGACTGCATTCTGCTTTTCCTTG  892

seq1  TCCTGTAGGTCCATGTGAGGACTCAATTCATCTAGAAAACAATCAAACAC  944
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCTGTAGGTCCATGTGAGGACTCAATTCATCTAGAAAACAATCAAACAC  942

seq1  ACAGCAACAACAACGACAGAGCTTCTAAGTTGTTATTTTACTAATCATGT  994
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAGCAACAACAACGACAGAGCTTCTAAGTTGTTATTTTACTAATCATGT  992

seq1  GGGAATTAGTGGAAAACTAGTGACAGTAATCTGCTAAATAGGAATTGGAA  1044
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGAATTAGTGGAAAACTAGTGACAGTAATCTGCTAAATAGGAATTGGAA  1042

seq1  GCAGGAGGCTTGACCCAAGTCCTGCACTCCTGGTGGAATCCTCTGTGTGA  1094
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCAGGAGGCTTGACCCAAGTCCTGCACTCCTGGTGGAATCCTCTGTGTGA  1092

seq1  GAGAATTC  1102
      ||||||||
seq2  GAGAATTC  1100