BAC Information

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BAC

Clone NameB6Ng01-275M16
ChromosomeX (Build37)
Map Location 92,157,134 - 92,159,761
singlet/doubletsinglet
Overlap genenone
Upstream geneEG668103, LOC100042041, AU015836, EG245516, LOC100042062, EG629591, Zfx, Eif2s3x, Klhl15, LOC385495, LOC670263, LOC100042098, LOC631145, 0610008C08Rik, EG668148, Maged1, LOC668150, EG385499, EG668156, Gspt2, LOC385500, Zxdb, LOC631331, EG631319, Zxda
Downstream geneGm371, 9630042H07Rik, Arhgef9, LOC619688, LOC100042189, 2810002O09Rik, Asb12, LOC668202, AK129302, A130028J20Rik, 1700010D01Rik, Las1l
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-275M16.bB6Ng01-275M16.g
ACCGA076735GA076736
length550345
definitionB6Ng01-275M16.b B6Ng01-275M16.g
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
ctgagttgggggctagcctggtttacagagtgagtcccaggacagtctgg
aatatacacagagtgagtcccaggacagtcagggatatacacagagaaag
ccagtcaggagaaactcaaaaaaaaaaaaagccttaaaattttagggtca
ttttttggttcttatgtatttatttttagaattttaggtgttttttgttt
gtttgtttgattgattgatttttttcgagaaagtgtttctctgtgtaacc
ctggctgtcctggaactcactctgtagaccaggctggcttcaaactcaga
aatttgcctgcctctgcccaccaagtgctggtattaaaggtgagtgccac
cagtgcccagcttaagggttttttaaacagggctttgtatggtttttaga
agagtgttgtagtggggtttttgtgtttggctttcacgtttaagtgtata
tttagtatttttttttctgggtttttaaaggattttagcatgtgttaggg
tttggggcttattttttaggccttgggttttttttcttttagggttttac

tcagccaagagaaagaaattgcctcaaaagaaaagaggaaagtctcgccc
aagggaataagtcctagaacgagggtcagtaaaagactgaatatctccca
tcctcaaggacaacacaagggtactccagagctcaagaactctcccctgg
ggccatgcagatggtcactcttaccagtgggaatacggggcttaccagat
cagggctagggagcgtggatctcttgtggtagctgaggtgagaggcaaac
ctgcagtttctgaatccaagtccttgcaccacatgttgtgtttataagat
aaagaactagggagtatttctatgggggtgtggtgaggtatggga
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chrX_92157134_92159761
seq2: B6Ng01-275M16.b_49_604

seq1  GAATTCCTGAGTTGGGGGCTAGCCTGGTTTACAGAGTGAGTCCCAGGACA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCCTGAGTTGGGGGCTAGCCTGGTTTACAGAGTGAGTCCCAGGACA  50

seq1  GTCTGGAATATACACAGAGTGAGTCCCAGGACAGTCAGGGATATACACAG  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTCTGGAATATACACAGAGTGAGTCCCAGGACAGTCAGGGATATACACAG  100

seq1  AGAAAGCCAGTCAGGAGAAACTCAAAAAAAAAAACAGCCTTAAAATTTTA  150
      |||||||||||||||||||||||||||||||||| |||||||||||||||
seq2  AGAAAGCCAGTCAGGAGAAACTCAAAAAAAAAAAAAGCCTTAAAATTTTA  150

seq1  GGGTCATTTTTTGGTTCTTATGTATTTATTTTTAGAATTTTAGGTGTTTT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGTCATTTTTTGGTTCTTATGTATTTATTTTTAGAATTTTAGGTGTTTT  200

seq1  TTGTTTGTTTGTTTGATTGATTGATTTTTTTCGAGAAAGTGTTTCTCTGT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGTTTGTTTGTTTGATTGATTGATTTTTTTCGAGAAAGTGTTTCTCTGT  250

seq1  GTAACCCTGGCTGTCCTGGAACTCACTCTGTAGACCAGGCTGGCTTCAAA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTAACCCTGGCTGTCCTGGAACTCACTCTGTAGACCAGGCTGGCTTCAAA  300

seq1  CTCAGAAATTTGCCTGCCTCTGCCCACCAAGTGCTGGTATTAAAGGTGAG  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCAGAAATTTGCCTGCCTCTGCCCACCAAGTGCTGGTATTAAAGGTGAG  350

seq1  TGCCACCAGCACCCAGCTTAAGGGTTTTTTAAACAGGGCTTTGTATGGTT  400
      |||||||||  |||||||||||||||||||||||||||||||||||||||
seq2  TGCCACCAGTGCCCAGCTTAAGGGTTTTTTAAACAGGGCTTTGTATGGTT  400

seq1  TTTAGAAGAGTGTTGTAGTGGGGTTTTTGTGTTTGGCTTTCACGTTTAAG  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTAGAAGAGTGTTGTAGTGGGGTTTTTGTGTTTGGCTTTCACGTTTAAG  450

seq1  TGTATATTTAGTATTTTTTTTTCTGGGTTTTTAAAGGATTTTAGCATGTG  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTATATTTAGTATTTTTTTTTCTGGGTTTTTAAAGGATTTTAGCATGTG  500

seq1  TTAGGGTTTGGGGCTCA-TTTATACGCCTTGGGTTTTTTTTCTTTTAGGG  549
      ||||||||||||||| | ||| || |||||||||||||||||||||||||
seq2  TTAGGGTTTGGGGCTTATTTTTTAGGCCTTGGGTTTTTTTTCTTTTAGGG  550

seq1  TTTTACTGTTATTTTATAGGATCTTTTCTAGTGTGCTTGAGTTTTTTCTT  599
      ||||||                                            
seq2  TTTTAC--------------------------------------------  556

seq1  TTAAATTTTAGGGTTTTATTTTTGGGGTTTAAGAGTTTTAGGGTTGTCAA  649
                                                        
seq2  --------------------------------------------------  556

seq1  GCAGTGGTGGCCCATGCCTTTAATCCCAGTACTTGGAAGAGAGAGGCAGG  699
                                                        
seq2  --------------------------------------------------  556

seq1  AGATTTTCTGAGTTCGAGGCCAGCCCGGTCTACAGAGTGAGTTCTAGGAT  749
                                                        
seq2  --------------------------------------------------  556

seq1  AGTCAGGGTTGTACACAGAGAAACCCAGTCTCAAAAAACCAACACAAACA  799
                                                        
seq2  --------------------------------------------------  556

seq1  AACAAACAAAAGTTTTAGGGTCATTTTAGGGTTCTTGTGCATTTATATTT  849
                                                        
seq2  --------------------------------------------------  556

seq1  AGAATTTTAGGCTTTCTTCTCTCTTACTTTTTCTCTCTCTCTTTCTCCCT  899
                                                        
seq2  --------------------------------------------------  556

seq1  CTGTTTTTTTATTTATTCTTTTTTTTTTTTTTTGGTCTTTTCTGAGACAG  949
                                                        
seq2  --------------------------------------------------  556

seq1  GGTTTCTCTGTGTAGCCCTGGCTGTCCTGGACCTCAGTCTGTAGACCAGG  999
                                                        
seq2  --------------------------------------------------  556

seq1  CTGGCCTGGAACTCAGTAATCTGCTTGCCTCTGCCTCCCAAGTGCTGGTA  1049
                                                        
seq2  --------------------------------------------------  556

seq1  TTAAACCCCTGTGCCACCACTGCCTGGCTAAGCGTTTTTTAAAAAGGGTT  1099
                                                        
seq2  --------------------------------------------------  556

seq1  TTTTATGGTTTTTAGTAGTGTTTTCCTGTTTTTTCCGTTTTCATGGTTTT  1149
                                                        
seq2  --------------------------------------------------  556

seq1  AGTGTATATTTAGTGTTTTTATTCTTGGTTTTTAAAGTATTTTAGTGTTT  1199
                                                        
seq2  --------------------------------------------------  556

seq1  TAGGCTTTTTTTTTAGGCTATCGGGTTTGTTTTTAGGGTTTTACTGGGTT  1249
                                                        
seq2  --------------------------------------------------  556

seq1  TTCTTTTAGGGTCTTTTTAAGTGTTCTTGCATTTTTTTCTGTAATTTTAG  1299
                                                        
seq2  --------------------------------------------------  556

seq1  GGTTTATTTTTGGGGTTTAAGAGTTTTAGGGTTGTCAGGCAGTAGTGGCC  1349
                                                        
seq2  --------------------------------------------------  556

seq1  CATGCCTTTAATCCCAGTACTTGGGAGACAGAGGCAGGAGATTTTCTGAG  1399
                                                        
seq2  --------------------------------------------------  556

seq1  TTCGAGGCCAGCCCGGTCTACAGAGTGAGTTCCAGGACAGCCAGGTATAG  1449
                                                        
seq2  --------------------------------------------------  556

seq1  ACATAGAGAAACCCAGTCTCGAAAAATTCAAAAAAATAGAAAAATTCAAT  1499
                                                        
seq2  --------------------------------------------------  556

seq1  AAATAATGTTTTAGGGTCATTTTTGGGTTCTTGTGCATTTATTTTTAAAA  1549
                                                        
seq2  --------------------------------------------------  556

seq1  GTTTAGGCTGTTTCTTTCTGTGTCTCTTGCTTGCTCTTTATTTTTTTCTT  1599
                                                        
seq2  --------------------------------------------------  556

seq1  CTTTTTTTTGAGACAGGGTTTCTCTGTGTAGCCCCGGCTGTCCTGGAACT  1649
                                                        
seq2  --------------------------------------------------  556

seq1  CACTGTCTAGACCAGGCTGGCTTTGAACTCAGAAATTTGCCTGCCTCTGC  1699
                                                        
seq2  --------------------------------------------------  556

seq1  CTCCCAAGTGCTGGTTTTAAAGGTGTGGGCCATCACCGCCCAGCTTAGGG  1749
                                                        
seq2  --------------------------------------------------  556

seq1  GTTTTTAAAAAGGGTTTTTTATGGTTTTTAGAAGAGTGTTTTAGTGGTAT  1799
                                                        
seq2  --------------------------------------------------  556

seq1  TTTGTGGTATTCAGGGCTTAGTGTATATTTAGTGTTTTTTCCGGTTTTAT  1849
                                                        
seq2  --------------------------------------------------  556

seq1  AAAGGATTTTAGTGTATGTTAGGTTTGGGGGCTAAAGTTTTTAGGCTTTA  1899
                                                        
seq2  --------------------------------------------------  556

seq1  TGGTTTCTTCTAGGGTTTAACTTTTTTTGGGTTTTTTTTAGTGTTCTTAA  1949
                                                        
seq2  --------------------------------------------------  556

seq1  GTTGTTTTTTTTTTTTTTTATAATTTTAGTGTTTTATTTTTGAGGTTTAA  1999
                                                        
seq2  --------------------------------------------------  556

seq1  GAGTTTTAGGGTTGTCAGGCAGTGGTGGCAGAGGCCTTTAATCCTAGTAC  2049
                                                        
seq2  --------------------------------------------------  556

seq1  TTGGGAGGCAGAGGCAGGTGAATTCCTGAGTTGGGGGCTAGCCTGGTTTA  2099
                                                        
seq2  --------------------------------------------------  556

seq1  CAGAGTGAGTCCCAGGACAGTCTGGAATATACACAGAGTTAGTCCCAGGA  2149
                                                        
seq2  --------------------------------------------------  556

seq1  CAGTCAGGGATATACACAGAGAAAGCCAGTCAGGAGAAACTCAAAAAAAA  2199
                                                        
seq2  --------------------------------------------------  556

seq1  AAAAAAAAAACCCTTAAAATTTTAGGGTCATTTTTTGGTTCTTATGTATT  2249
                                                        
seq2  --------------------------------------------------  556

seq1  TATTTTTAGAATTTTAGGTGTTTTTTGTTTGTTTGTTTGTTTGATTGATT  2299
                                                        
seq2  --------------------------------------------------  556

seq1  TTTTTCGAGAAAGTGTTTCTCTGTGTAACCCTGGCTGTCCTGGAACTCAC  2349
                                                        
seq2  --------------------------------------------------  556

seq1  TCTGTAGACCAGGCTGGCTTCAAACTCAGAAATTTGCCTGCCTCTGCCCA  2399
                                                        
seq2  --------------------------------------------------  556

seq1  CCAAGTGCTGGTATTAAAGGTGAGTGCCACCAGCACCCAGCTTAAGGGTT  2449
                                                        
seq2  --------------------------------------------------  556

seq1  TTTTAAACAGGGCTTTGTATGGTTTTTAGAAGAGTGTTGTAGTGGGGTTT  2499
                                                        
seq2  --------------------------------------------------  556

seq1  TTGTGTTTGGCTTTCACATTTAAGTGTATATTTAATATTTTTTTTTCTGG  2549
                                                        
seq2  --------------------------------------------------  556

seq1  GTTTTTAAAGGATTTTAGCATGTGTTAGGGTTTGGGGCTTATTTTTAGGC  2599
                                                        
seq2  --------------------------------------------------  556

seq1  CTTGGGTTTTTTTTCTTTTAGGGTTTTAC  2628
                                   
seq2  -----------------------------  556