MoG+ -Mouse Genome database with high added value-

BAC Information

BAC name
Region	Chromosome -
Gene	search by nearby gene name.
Format	rows / page	Page	1

BAC

Clone Name	B6Ng01-276E09
Chromosome	X (Build37)
Map Location	106,703,796 - 106,704,849
singlet/doublet	singlet
Overlap gene	none
Upstream gene	Gm379, Brwd3, 5730416F02Rik, Nsbp1, Sh3bgrl, EG622976, LOC100042831, LOC213474
Downstream gene	LOC245573, EG634340
Link	Open Mouse BAC browser

Click to get alignment info.

name	Gm379 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:236954 MGI:2685225
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 Protein

name	Brwd3 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:382236 MGI:3029414
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	5730416F02Rik (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:70550 MGI:1917800
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 mRNA

name	Nsbp1 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:50887 MGI:1355295
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Sh3bgrl (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:56726 MGI:1930849
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	EG622976 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:622976 MGI:3647255
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	LOC100042831 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:100042831
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 10 Proteins

name	LOC213474 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:213474
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 13 mRNAs, 19 ESTs, 4 Proteins pseudo : _no_value

name	LOC245573 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:245573
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 29 ESTs, 25 Proteins pseudo : _no_value

name	EG634340 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:634340 MGI:3647708
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 mRNA pseudo : _no_value

name	Gm379 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:83003240 GeneID:236954 MGI:2685225
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 Protein product : gene model 379, (NCBI) transcript_id : XM_142052.4

name	Brwd3 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:125490357 GeneID:382236 MGI:3029414
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : bromodomain and WD repeat domain containing 3 transcript_id : NM_001081477.1

name	Nsbp1 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:133778914 GeneID:50887 MGI:1355295
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : nucleosome binding protein 1 transcript_id : NM_016710.2

name	Sh3bgrl (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:31543698 GeneID:56726 MGI:1930849
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : SH3-binding domain glutamic acid-rich protein like transcript_id : NM_019989.2

name	EG622976 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:85702299 GeneID:622976 MGI:3647255
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : predicted gene, EG622976 transcript_id : NM_001037917.1

name	LOC100042831 (CDS detail)
type	mRNA
link	vega ensembl NCBI
xref	GI:149271826 GeneID:100042831
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 10 Proteins product : similar to DnaJ (Hsp40) homolog, subfamily C, member 5 beta transcript_id : XM_001478909.1

name	Gm379 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:20985090 GeneID:236954 MGI:2685225
definition	codon_start : 1 product : similar to syntaxin 3A protein_id : XP_142052.1

name	Brwd3 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:125490358 GeneID:382236 MGI:3029414
definition	GO_component : GO:0005575 - cellular_component [Evidence ND] GO_function : GO:0003674 - molecular_function [Evidence ND] GO_process : GO:0008150 - biological_process [Evidence ND] codon_start : 1 note : bromo domain-containing protein disrupted in leukemia product : bromodomain and WD repeat domain containing 3 protein_id : NP_001074946.1

name	Nsbp1 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:133778915 GeneID:50887 MGI:1355295
definition	GO_component : GO:0000785 - chromatin [Evidence IEA]; GO:0005654 - nucleoplasm [Evidence IDA]; GO:0005634 - nucleus [Evidence IEA] GO_function : GO:0003682 - chromatin binding [Evidence IDA]; GO:0003677 - DNA binding [Evidence IEA] GO_process : GO:0006356 - regulation of transcription from RNA polymerase I promoter [Evidence IDA]; GO:0006355 - regulation of transcription, DNA-dependent [Evidence IEA]; GO:0006350 - transcription [Evidence IEA] codon_start : 1 note : nucleosome binding protein 45; snoRNA MBII-8 product : nucleosome binding protein 1 protein_id : NP_057919.2

name	Sh3bgrl (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:9910548 GeneID:56726 MGI:1930849
definition	GO_component : GO:0005575 - cellular_component [Evidence ND] GO_function : GO:0003674 - molecular_function [Evidence ND] GO_process : GO:0008150 - biological_process [Evidence ND] codon_start : 1 product : SH3-binding domain glutamic acid-rich protein like protein_id : NP_064373.1

name	EG622976 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:85702300 CCDS:CCDS30354.1 GeneID:622976 MGI:3647255
definition	codon_start : 1 product : hypothetical protein LOC622976 protein_id : NP_001033006.1

name	LOC100042831 (CDS detail)
type	CDS
link	vega ensembl NCBI
xref	GI:149271827 GeneID:100042831
definition	codon_start : 1 product : hypothetical protein protein_id : XP_001478959.1

name	5730416F02Rik (CDS detail)
type	misc_RNA
link	vega ensembl MGI NCBI
xref	GI:149271862 GeneID:70550 MGI:1917800
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 mRNA product : RIKEN cDNA 5730416F02 gene transcript_id : XR_001637.2

name	LOC213474 (CDS detail)
type	misc_RNA
link	vega ensembl NCBI
xref	GI:149271828 GeneID:213474
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 13 mRNAs, 19 ESTs, 4 Proteins product : similar to eukaryotic translation initiation factor 4B pseudo : _no_value transcript_id : XR_033986.1

name	LOC245573 (CDS detail)
type	misc_RNA
link	vega ensembl NCBI
xref	GI:149271863 GeneID:245573
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 29 ESTs, 25 Proteins product : similar to nuclear pore-targeting complex component of 58 kDa pseudo : _no_value transcript_id : XR_034361.1

name	EG634340 (CDS detail)
type	misc_RNA
link	vega ensembl MGI NCBI
xref	GI:149271864 GeneID:634340 MGI:3647708
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 mRNA product : predicted gene, EG634340 pseudo : _no_value transcript_id : XR_002195.2

clone name	MSMg01-334E12
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-520K14
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-520F06
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-394N16
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-403E10
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-509G03
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-427L08
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-452E17
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-330G02
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-494A01
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-351N07
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-511G18
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-172F24
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-411D15
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-450O06
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-167A08
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-299J08
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-416G15
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-456O10
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-512O07
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-268A07
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-442D19
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-159P06
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-131H19
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-508G14
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-474A18
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-264A06
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-217L22
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-506J06
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-102G22
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-195M18
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-105F12
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-384I14
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-464I16
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-408H10
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-159F21
singlet/doublet	doublet
plural/unique	plural

clone name	MSMg01-502P10
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-376D02
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-420G11
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-339D19
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-309B20
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-248D05
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-151K11
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-063B19
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-145L15
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-090E09
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-333H15
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-195H07
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-167A09
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-290B11
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-249L09
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-278I17
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-288A01
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-013P19
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-323F08
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-019J23
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-197K17
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-291F03
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-019P07
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-281O01
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-242A22
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-140K11
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-029D06
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-006D14
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-212E13
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-259O18
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-276E09
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-282J15
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-207K16
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-117A07
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-184M24
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-107B02
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-340O13
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-186N07
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-022P01
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-117C19
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-085A03
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-036K20
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-084P16
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-089N10
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-261G10
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-126L13
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-199C15
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-299O20
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-226B04
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-249M15
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-047L16
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-217M16
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-098G09
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-180O20
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-138K01
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-058F17
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-200J05
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-002A23
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-318M21
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-125A15
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-327O20
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-007A14
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-021D17
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-301E19
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-338K11
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-091L08
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-180P11
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-346P10
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-077A10
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-222J20
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-314C06
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-283O23
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-273E06
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-014L20
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-307K05
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-345J02
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-036E22
singlet/doublet	singlet
plural/unique	unique

BAC End Information

BAC end	BAC-end 1	BAC-end 2
end name	B6Ng01-276E09.b	B6Ng01-276E09.g
ACC	GA077096	GA077097
length	1,105	1,064
definition	B6Ng01-276E09.b	B6Ng01-276E09.g
singlet/doublet	---	singlet
BLAST hit	no hit data	unique
sequence	gaattcacatacctatggtcatttgatctctgacaaagtatataaaacca tacagtggacagaagacagcaatttcaaaaaatgatgctggatcttctgg tggtttgcatgtagaagaatgcaaattgatccattcttatctccttgtac aaagctccagtctaagtagatcaaggaacatcacataaatccagagacac tgaaacttatagaaggagaaagtggggtagagtcttgaagacatggccac aaggaaaaaaaattcctgaacagaacaccaatgccttctgctttaagaac aagaatcaacaaatgtgacttcataaaattgcaaaggttctgtaaagcca aggacactgttaataagacaaaaaggcaatcaatagattgtgaaaaatct ttatgaatcctaatctgataggggcatatatatatatcatgaagttggac tccagaaaaccaaataaccctatttaaaaaatggggtacagagctaaaca aagaattctcaactgagcaatgccaaatggctgagaagcacctaaaaaat gttcaacatctgtaatcatcagggaaatgcaaatcaaaacaaccctgtga ttccacctcacacaagtcagaatggctaagataaaaaaaattcatgtgag agcagatgctggtgagaatgtgaagaaagaggaacactcctccatttttg gtgggattgcaagctggtacaaacactctggaaatcaatctggtagtaaa gaccctttcccaatctgtttgtgacctttttgtcttattgacactgtctt ttgccttacagaagctttgcaattttatgaggccccatttgttgattctt gattttccagcacaagccattgctgtctgtttaggaattccccccccccc cccatacttcccttatcccaggtctctgtctcaccgtgattatgtgtctc acctcctcacccccatcagttaatagatttccactcattttcatgggcca tctaacccccctcctcctgtcttccccacaaccttgtcctaaacaataat tagtactgggaatttctttgggggtgcaattggtcaatccaagtgtcctc ctgag	gaattctcagtttaaagactcaacaagcagctgaaagagtcagatgcaga tattttcacccaaccaatgaacagaagctgctgaccattgtggttgaatt atggaaaagctggaagaagctgaggaggagggtaaccctgtaggaagaca agcagtctcaattaacctggatccctgagatctttcagacactggaccac caaccaggcagcattcaccagctgatatgaagccccaaacacatatacag gagaggactgcagagtctgggttcagtcagagaagatgtactttaacctt caagagactggaggcccccagggaattttgaggtctggtggcgtggaggc atcctcaatggagacagtgagggtgtggaggaagtatggttttggaacag tcagagggtggactgggaggggaataaaatctggagtgtaaaataaataa ataaataaataaataaataaataaataagaattgtccaataatgaaaaac atgtgtaaatcaaattagatgaacatataaaggctaataatattaaaact ggtaattataataaagcaaaaatgctgctaaaagtatagcaaagaaaaaa tcagggaagtacaggagacaaaacaggaaaaaacaaagacaaattaatag aaatttttttcttgttcattaaaatttggagataccaatctggatataat ataagtaaattaattaatgaatgaaaatatattttaaataaagtgaggaa aaacttaaaacttttttttgagactctgtataaggacaagtattcagttg gagttgtggagtcctgatatttttaaggtttgttttgtatggtttcttga gtcagtacaggaaaagtgtgtgatatctaccaaggctgacatcacttttt ggagtttcccttctttgtttgacagaaggtctctgttggtcataattagc tttgtaggttttctaactctcacatagtttgtagatggggtggtttatat gtttgctggaaagaatctttcccattggcgaatgtggaaaagcatttcac tttcactgaagatc
quality values	Open. Hide. 58 31 22 30 62 34 30 52 42 62 62 62 62 62 62 62 62 49 62 39 42 49 62 62 62 47 59 62 62 62 62 45 43 43 23 23 28 25 45 49 51 56 38 54 56 54 62 62 59 59 62 62 62 59 62 62 62 62 59 56 62 62 62 62 62 59 59 62 62 62 62 62 62 62 62 59 59 59 62 49 49 54 59 62 54 54 54 62 62 62 62 59 59 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 59 62 62 62 62 62 62 62 62 59 62 62 59 59 62 62 62 62 62 62 62 62 62 62 49 54 62 59 59 62 62 62 62 62 62 62 62 62 62 62 62 62 62 59 62 62 62 59 62 62 59 62 62 62 62 62 62 59 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 59 59 62 62 59 62 59 59 62 62 62 62 62 62 62 62 62 62 62 59 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 59 62 62 62 62 62 62 62 62 62 62 62 62 59 54 62 62 62 62 62 54 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 54 62 62 62 62 62 54 62 62 62 62 62 62 62 62 62 62 62 62 62 62 59 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 59 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 46 46 62 62 62 62 62 62 62 62 62 62 62 54 62 62 62 62 62 62 62 62 62 62 62 62 49 62 62 62 62 62 62 62 62 62 62 54 62 62 62 62 52 58 58 58 58 49 42 58 58 58 58 58 58 54 49 58 58 58 58 58 58 58 58 58 20 58 58 52 58 54 54 58 58 58 58 58 58 58 54 54 54 58 58 54 46 58 54 58 58 58 58 58 58 58 58 58 58 58 58 58 48 52 58 58 54 58 58 54 58 54 58 58 58 58 58 58 58 58 58 51 40 58 58 47 41 58 58 58 51 36 38 58 41 45 35 58 58 58 53 53 51 51 51 47 58 47 58 51 58 39 58 37 49 58 46 41 53 53 58 27 39 32 46 58 58 58 49 58 58 50 52 58 46 50 52 58 49 49 58 35 58 27 51 53 40 47 31 50 50 52 50 58 43 54 46 29 51 40 37 53 37 50 58 58 32 58 58 44 50 51 15 49 52 50 38 41 39 53 49 46 47 39 39 32 50 58 49 38 43 50 58 38 49 54 44 49 32 46 51 39 35 40 37 53 53 49 49 38 45 49 35 54 54 49 45 53 53 53 52 51 53 53 54 41 32 38 51 41 46 45 53 51 51 32 52 27 45 37 54 54 45 37 30 54 49 38 51 46 37 54 24 24 51 42 52 52 54 52 54 53 46 42 40 43 25 47 29 52 51 49 46 45 42 32 52 34 45 36 51 52 37 36 32 41 47 51 45 42 33 49 49 51 34 28 52 32 32 52 30 32 25 51 31 19 40 40 51 43 30 33 20 28 45 51 51 37 31 42 45 51 43 51 28 40 29 29 27 33 51 51 45 41 27 31 31 31 46 32 20 28 43 29 21 48 48 46 31 23 34 34 42 31 42 37 38 31 42 43 31 43 42 42 31 31 39 31 31 32 36 30 46 30 31 38 31 32 39 36 41 37 46 46 46 46 46 46 46 48 46 46 46 46 29 29 31 31 31 34 28 31 48 24 16 22 31 31 31 48 31 32 35 37 31 30 36 34 33 28 30 31 30 31 19 26 22 13 12 24 25 31 33 13 22 38 27 26 26 21 15 22 31 32 28 32 14 25 15 17 22 30 48 48 43 32 32 32 32 31 12 15 14 9 5 4 24 20 32 28 48 32 32 32 32 20 15 23 11 26 48 48 34 17 16 28 15 34 11 17 16 19 20 20 28 28 28 26 47 40 47 40 13 4 6 5 9 9 18 14 15 9 11 3 12 18 40 40 15 13 6 4 5 6 15 3 8 15 11 6 8 9 9 20 5 11 6 5 10 5 15 8 20 16 17 13 14 19 10 11 29 18 6 11 21 30 18 10 16 23 18 18 30 28 29 22 7 19 8 8 6 21 13 7 7 18 17 21 23 16 8 21 9 8 4 3 6 7 12 5 6 9 2 4 1 1 2	Open. Hide. 62 47 39 39 62 62 62 47 47 42 27 27 24 18 18 22 24 24 28 45 28 35 50 62 59 62 62 62 62 62 62 62 62 54 62 62 62 62 62 62 62 62 62 59 59 62 62 62 62 59 62 62 59 62 62 62 59 56 62 62 42 38 49 54 54 62 62 62 59 59 62 62 62 54 54 62 62 62 62 62 62 62 62 59 59 59 59 62 62 59 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 59 62 59 62 62 62 62 62 62 59 59 62 59 59 62 54 59 62 62 62 62 62 62 62 54 54 59 59 62 62 62 54 62 62 59 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 59 62 62 62 62 62 59 54 54 59 62 62 62 62 62 62 62 62 59 62 62 62 62 59 62 59 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 59 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 54 54 37 62 62 59 59 62 62 62 62 62 59 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 59 62 62 62 62 62 59 59 62 62 62 62 62 62 62 62 62 62 62 62 62 59 62 62 62 62 62 59 62 62 62 62 59 59 62 62 62 62 62 62 62 62 62 43 49 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 49 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 49 62 62 62 62 62 49 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 54 54 62 62 62 62 62 54 54 62 62 62 62 47 47 62 62 62 62 43 47 56 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 52 62 62 58 58 58 58 58 46 46 58 58 58 54 58 58 58 58 58 58 58 58 58 58 58 58 58 58 58 58 58 54 38 58 58 58 54 58 58 58 58 58 58 54 58 58 58 58 58 58 58 58 58 58 58 45 38 54 58 58 58 58 58 58 58 58 58 58 47 58 54 54 58 58 58 52 58 58 58 58 58 58 58 58 52 58 58 49 58 58 49 58 50 58 58 58 52 53 53 46 51 58 58 51 58 58 42 58 58 58 58 58 58 52 53 53 42 58 58 58 58 34 58 40 58 49 50 58 58 50 51 50 46 58 58 50 58 52 54 58 58 58 58 52 54 48 42 32 51 51 51 54 50 46 58 51 49 58 51 32 58 53 54 58 49 50 46 58 58 58 58 58 42 50 51 53 54 40 51 52 38 39 46 39 58 58 42 50 58 58 51 39 58 39 43 40 39 50 49 31 54 50 50 53 58 58 47 32 52 42 54 52 52 50 52 35 44 47 53 30 54 51 51 39 29 33 52 54 39 49 50 54 42 33 39 39 37 54 54 26 42 45 47 31 49 54 54 53 42 54 25 40 49 44 44 46 34 53 41 22 54 53 54 51 51 25 32 41 37 40 51 54 54 42 53 54 54 54 54 54 54 49 41 53 29 51 30 46 47 37 34 52 34 45 32 37 28 47 31 32 41 34 30 34 31 34 45 43 36 31 35 40 27 41 31 22 45 40 35 31 52 31 52 18 20 18 42 32 40 30 31 28 25 51 51 46 40 27 42 14 30 8 51 30 27 19 41 46 29 43 29 33 31 33 32 14 46 30 37 31 33 40 32 21 30 31 34 31 42 32 36 22 14 10 33 46 46 28 29 31 31 34 43 36 30 31 30 32 31 34 34 32 39 17 24 16 32 28 16 37 34 38 31 35 43 32 23 8 5 46 46 41 38 31 31 37 22 31 47 30 31 46 30 31 31 31 31 44 28 28 29 44 31 22 21 21 18 12 29 25 33 21 15 22 31 38 20 14 14 11 35 26 16 24 25 23 29 31 33 21 37 24 25 14 43 24 31 25 22 19 13 20 31 43 22 28 14 17 16 25 17 29 19 32 19 19 25 25 12 7 8 43 10 22 9 32 28 37 24 25 36 36 10 12 27 24 19 34 21 21 14 8 13 28 28 40 5 8 17 10 15 5 3 25 14 14 11 24 26 12 7 30 7 11 40 27 7 17 27 8 12 10 9 7 21 8 19 5 4 16 7 29 40 16 13 9 7 14 9 8 7 4 13 6 30 7 6 8 28 15 24 11 12 5 18 17 9

Alignment Information

BAC End 1

BAC End 2

seq1: chrX_106703796_106704849
seq2: B6Ng01-276E09.g_66_1129

seq1  GAATTCTCAGTTTAAAGACTCAACAAGCAGCTGAAAGAGTCAGATGCAGA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTCAGTTTAAAGACTCAACAAGCAGCTGAAAGAGTCAGATGCAGA  50

seq1  TATTTTCACCCAACCAATGAACAGAAGCTGCTGACCATTGTGGTTGAATT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATTTTCACCCAACCAATGAACAGAAGCTGCTGACCATTGTGGTTGAATT  100

seq1  ATGGAAAAGCTGGAAGAAGCTGAGGAGGAGGGTAACCCTGTAGGAAGACA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGGAAAAGCTGGAAGAAGCTGAGGAGGAGGGTAACCCTGTAGGAAGACA  150

seq1  AGCAGTCTCAATTAACCTGGATCCCTGAGATCTTTCAGACACTGGACCAC  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCAGTCTCAATTAACCTGGATCCCTGAGATCTTTCAGACACTGGACCAC  200

seq1  CAACCAGGCAGCATTCACCAGCTGATATGAAGCCCCAAACACATATACAG  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAACCAGGCAGCATTCACCAGCTGATATGAAGCCCCAAACACATATACAG  250

seq1  GAGAGGACTGCAGAGTCTGGGTTCAGTCAGAGAAGATGTACTTTAACCTT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGAGGACTGCAGAGTCTGGGTTCAGTCAGAGAAGATGTACTTTAACCTT  300

seq1  CAAGAGACTGGAGGCCCCCAGGGAATTTTGAGGTCTGGTGGCGTGGAGGC  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAGAGACTGGAGGCCCCCAGGGAATTTTGAGGTCTGGTGGCGTGGAGGC  350

seq1  ATCCTCAATGGAGACAGTGAGGGTGTGGAGGAAGTATGGTTTTGGAACAG  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCCTCAATGGAGACAGTGAGGGTGTGGAGGAAGTATGGTTTTGGAACAG  400

seq1  TCAGAGGGTGGACTGGGAGGGGAATAAAATCTGGAGTGTAAAATAAATAA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCAGAGGGTGGACTGGGAGGGGAATAAAATCTGGAGTGTAAAATAAATAA  450

seq1  ATAAATAAATAAATAAATAAATAAATAAGAATTGTCCAATAATGAAAAAC  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATAAATAAATAAATAAATAAATAAATAAGAATTGTCCAATAATGAAAAAC  500

seq1  ATGTGTAAATCAAATTAGATGAACATATAAAGGCTAATAATATTAAAACT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGTGTAAATCAAATTAGATGAACATATAAAGGCTAATAATATTAAAACT  550

seq1  GGTAATTATAATAAAGCAAAAATGCTGCTAAAAGTATAGCAAAGAAAAAA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTAATTATAATAAAGCAAAAATGCTGCTAAAAGTATAGCAAAGAAAAAA  600

seq1  TCAGGGAAGTACAGGAGACAAAACAGGAAAAAACAAAGACAAATTAATAG  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCAGGGAAGTACAGGAGACAAAACAGGAAAAAACAAAGACAAATTAATAG  650

seq1  AAATTTTTTTCTTGTTCATTAAAATTTGGAGATACCAATCTGGATATAAT  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAATTTTTTTCTTGTTCATTAAAATTTGGAGATACCAATCTGGATATAAT  700

seq1  ATAAGTAAATTAATTAATGAATGAAAATATATTTTAAATAAAGTGAGGAA  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATAAGTAAATTAATTAATGAATGAAAATATATTTTAAATAAAGTGAGGAA  750

seq1  AAACTTAAAACTTTTTTTTGAGACTCTGTATAAGGACAAGTATTCAGTTG  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAACTTAAAACTTTTTTTTGAGACTCTGTATAAGGACAAGTATTCAGTTG  800

seq1  GAGTTGTGGAGTCCTGATATTTTTAAGGTTTGTTTTGTATGGTTTCTTGA  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGTTGTGGAGTCCTGATATTTTTAAGGTTTGTTTTGTATGGTTTCTTGA  850

seq1  GTCAGTACAGGAAAAGTGTGTGATATCTACCAAGGCTGACATCAC-TTTT  899
      ||||||||||||||||||||||||||||||||||||||||||||| ||||
seq2  GTCAGTACAGGAAAAGTGTGTGATATCTACCAAGGCTGACATCACTTTTT  900

seq1  GGAGTTTCCCTTCTTTGTTTGACAG-AGGTCTCTGTTGGTCATAATTAGC  948
      ||||||||||||||||||||||||| ||||||||||||||||||||||||
seq2  GGAGTTTCCCTTCTTTGTTTGACAGAAGGTCTCTGTTGGTCATAATTAGC  950

seq1  TTTGTAGGTTTTCTAACTCTCACATAGTTTGTAGAT-GGGTGGTTTATAT  997
      |||||||||||||||||||||||||||||||||||| |||||||||||||
seq2  TTTGTAGGTTTTCTAACTCTCACATAGTTTGTAGATGGGGTGGTTTATAT  1000

seq1  GTTTGCTGGGAAG-ATC-TTCCCATT-GCGAATGTGG-AAAGCA-TTCAC  1042
      ||||||||| ||| ||| |||||||| |||||||||| |||||| |||||
seq2  GTTTGCTGGAAAGAATCTTTCCCATTGGCGAATGTGGAAAAGCATTTCAC  1050

seq1  -TTCACTG-AGATC  1054
       ||||||| |||||
seq2  TTTCACTGAAGATC  1064

BAC Information

Search Parameter

Search Result

BAC

BAC End Information

Alignment Information