BAC Information

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BAC

Clone NameB6Ng01-278G04
ChromosomeX (Build37)
Map Location 22,460,156 - 22,461,047
singlet/doubletsinglet
Overlap genenone
Upstream geneLOC100043182, LOC100043956, EG436197, Ppia-psx_207.1, 1700023I07Rik
Downstream geneKlhl13, EG635719, Wdr44, EG236749, EG214450
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-278G04.g
ACCGA078645
length1,078
definitionB6Ng01-278G04.g
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattcacgcagttgaatccttctcaacagtctgtgttgcgggaacactt
tattaccaccattccccagctgaagagttctgaattcacgcagttgaatc
cttctcaacagtctgttttacgggaacacttcattaccatgacccgcagt
tctggttccggaatgagggatcttccttgcgccggtgatggtaaattccg
tcccggggttttctcgtcccaggatttctcatctcgggtttcagcaccaa
ctcttacacgcgttcacgaccggccaggaagaacacagcaaaccagaatc
ttctgcggcaaaactttattgcttacatcttcaggagcaagagtgcaaga
gagagaaaaagaatggcaaaaccccgtcccttttaaggagaattatcctc
cgcctaggacgtattactccctgattggctgcagcccatcggctcagttg
tcatcacgagaaaggcagaacacatggcgggaaaactgcccctgcacgtg
tgcagattatgtttaccacttagaacacagctgtcagcgccatcttataa
tggcaaatgtgagggcggctcctcacaagaatgcatgactactaaaacaa
cagcctcctacctgaccttctggattctgctgctcctttccttctagcta
gtctccaaattgataaggtcatcttcttaaaaataattctactctgccct
tctccaatagggcatgctcactgtcagcactacaaagtcaacccccctta
gtgaggcgttcagtgacagcctacagtgcctagttcatatgtccttgata
tgaactctattaaatgttctgaacagaaaggaggaataattatgaaagca
taagagtcagtgattggctatatacaaaattgatgtccctaaaaagggaa
gtagacgcaataaagaaaacccaaagggaggcaacgctggagatagaaaa
cctaggaaagaaatctggaacacagatgtgagcatcagcaacagaataga
ggagatggaagagagatctcagttgcagaagattccatagagacatggca
caaaataaaggaaaataccaaattcaaa
quality valuesOpen.




Alignment Information

BAC End 1BAC End 2
seq1: chrX_22460156_22461047
seq2: B6Ng01-278G04.g_257_1142

seq1  AAATTCCGTCCCGGGGTTTTCTCGTCCCAGGATTTCTCATCTCGGGTTTC  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAATTCCGTCCCGGGGTTTTCTCGTCCCAGGATTTCTCATCTCGGGTTTC  50

seq1  AGCACCAACTCTTACACGCGTTCACGACCGGCCAGGAAGAACACAGCAAA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCACCAACTCTTACACGCGTTCACGACCGGCCAGGAAGAACACAGCAAA  100

seq1  CCAGAATCTTCTGCGGCAAAACTTTATTGCTTACATCTTCAGGAGCAAGA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCAGAATCTTCTGCGGCAAAACTTTATTGCTTACATCTTCAGGAGCAAGA  150

seq1  GTGCAAGAGAGAGAAAAAGAATGGCAAAACCCCGTCCCTTTTAAGGAGAA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGCAAGAGAGAGAAAAAGAATGGCAAAACCCCGTCCCTTTTAAGGAGAA  200

seq1  TTATCCTCCGCCTAGGACGTATTACTCCCTGATTGGCTGCAGCCCATCGG  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTATCCTCCGCCTAGGACGTATTACTCCCTGATTGGCTGCAGCCCATCGG  250

seq1  CTCAGTTGTCATCACGAGAAAGGCAGAACACATGGCGGGAAAACTGCCCC  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCAGTTGTCATCACGAGAAAGGCAGAACACATGGCGGGAAAACTGCCCC  300

seq1  TGCACGTGTGCAGATTATGTTTACCACTTAGAACACAGCTGTCAGCGCCA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCACGTGTGCAGATTATGTTTACCACTTAGAACACAGCTGTCAGCGCCA  350

seq1  TCTTATAATGGCAAATGTGAGGGCGGCTCCTCACAAGAATGCATGACTAC  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTTATAATGGCAAATGTGAGGGCGGCTCCTCACAAGAATGCATGACTAC  400

seq1  TAAAACAACAGCCTCCTACCTGACCTTCTGGATTCTGCTGCTCCTTTCCT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAAACAACAGCCTCCTACCTGACCTTCTGGATTCTGCTGCTCCTTTCCT  450

seq1  TCTAGCTAGTCTCCAAATTGATAAGGTCATCTTCTTAAAAATAATTCTAC  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTAGCTAGTCTCCAAATTGATAAGGTCATCTTCTTAAAAATAATTCTAC  500

seq1  TCTGCCCTTCTCCAATAGGGCATGCTCACTGTCAGCACTACAAAGTCAAC  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTGCCCTTCTCCAATAGGGCATGCTCACTGTCAGCACTACAAAGTCAAC  550

seq1  CCCCCTTAGTGAGGCGTTCAGTGACAGCCTACAGTGCCTAGTTCATATGT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCCCTTAGTGAGGCGTTCAGTGACAGCCTACAGTGCCTAGTTCATATGT  600

seq1  CCTTGATATGAACTCTATTAAATGTTCTGAACAGAAAGGAGGAATAATTA  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTTGATATGAACTCTATTAAATGTTCTGAACAGAAAGGAGGAATAATTA  650

seq1  TGAAAGCATAAGAGTCAGTGATTGGCTATATACAAAATTGATGTCCCTAA  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAAAGCATAAGAGTCAGTGATTGGCTATATACAAAATTGATGTCCCTAA  700

seq1  AAAGGGAAGTAGACGCAATAAAGAAAACCCAAAGGGAGGCAACGCTGGAG  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAGGGAAGTAGACGCAATAAAGAAAACCCAAAGGGAGGCAACGCTGGAG  750

seq1  ATAGAAAACCTAGGAAAGAAATCTGGAACCACAGATGTGAGCATCAGCAA  800
      |||||||||||||||||||||||||||| |||||||||||||||||||||
seq2  ATAGAAAACCTAGGAAAGAAATCTGGAA-CACAGATGTGAGCATCAGCAA  799

seq1  CAGAATAGAAGAGATGGAAGAGAGAATCTCAGGTGCAGAAGATTCCATAG  850
      ||||||||| |||||||||||||| ||||||| |||||||||||||||||
seq2  CAGAATAGAGGAGATGGAAGAGAG-ATCTCAGTTGCAGAAGATTCCATAG  848

seq1  AGAACATGGGCACAAAAATAAAAGAAAATACAAAAATTCAAA  892
      || |||| ||||| |||||||| ||||||||  |||||||||
seq2  AG-ACAT-GGCAC-AAAATAAAGGAAAATAC-CAAATTCAAA  886