BAC Information

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BAC

Clone NameB6Ng01-280A22
ChromosomeX (Build37)
Map Location 43,469,113 - 43,470,258
singlet/doubletsinglet
Overlap genenone
Upstream geneLOC100040038, EG385346
Downstream geneLOC100040075, Actrt1, EG245405, LOC665632
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-280A22.bB6Ng01-280A22.g
ACCGA079883GA079884
length1,1731,159
definitionB6Ng01-280A22.b B6Ng01-280A22.g
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattccaatttatggaatggcccttatgtcaaatcagatatttgttact
tatttccaaaagatttgtgcaaaaattttactagtatatcttgcaggcag
gacactattttgatccaagaatctgtggctggattgctgtttacatttct
acttaggtaacttgcataatatcttctgataccaaagacagtaggacaca
ggtgtgtaaaggttctctgtaggcaaaatcaagatctctccatttccaaa
gggctgtgtaggtgttttcttcagcaaaggaaacttgctgtgagtttgtg
gaaagtaagccataatcttagcaacagcctgtgttgttttagaatttccc
atagaactcctttggccaacagttcagtttcctgtaacccaatcatgggc
aaagctattatcattttgttaaagaaaactaggaatgaaattattcctaa
tagttgttatatctatgtatcttagttactttactattcttatgatgaaa
catcattaccaaatgcagttgaggaaggaagtgtttaattggcatatata
tctttaattacagtccagtgacactatatttgagttacaaggctggaact
taaaatttgcaggaacctggagacattagatgcttcagaggctatatatg
agtgctgcatactggcttgctcctcatagcttgtttgtcctgctttcttg
aagcactccagaccaccagcccttacatggcaacatgaacagtgtggtga
accttcttacatcaatcactaattaagaacatgccctacagatttaatcc
tgaccttatgaaggcattttcctaattgaagttctcttctctcaagtaac
tttaacttgtatgaagttgaataaaacactccagtacaccatacatcatt
gcgtaaccgaacacaatcatagaatcttcttaataaattagaggtaatta
taaagaggtccactagtggatactgttcagagactgagagattttgggaa
tatacagatttaaattttctaaagccttccctcaggctagagtactttgt
gaacagagttgatagagcatagtgtgtgactcacttaacagcttcattca
tacacaggaccagtactcattgactccagattacaatcaaccagttccta
cctatactaaattccaagaagtg

gaattcttttggtttcctggatgtcccaagttctctaccatttcccatag
ctcatagtgctttttaaaattgatacatgatgcacccaaaaaataaacaa
tatgttctctctatagtagcccatgtagagaatggaactattgaaatttt
tggcaatcacattctcttattaactgggctaaccttctactaatatctgt
tttggaaaacaaaagtatctatagcatcagaaggtattcatccatgaatg
aatattgaaagtaggatccctgcaattgttttatttgccttattcacctc
taaatgttccattagggtgtttgtactccttacttttgatttacccaata
actcttttaataattaatgacagttaggaatatagatgaaataaggtcgc
ttataagttccatggaacaattttagaaatggcataagataatattcagg
gatttgtaaagcagaggcaatgtataatattggaatatatattattgtag
attgtcattttcaaaggctctttttttttcaaactcttctacatactatt
agtgttctataaacattgatttggatttctctttaacatgtatttattga
aaatacatcataaaatttggccactcatttgtgtacacactggatcatgc
tggtatagcaaaaggaagactttctttgatttacttgtgttgacttcttt
aaaaccaagagtataagtttacagagtgatttgttgttattaccagtact
gtcacttaaaaccttgcctagtaatgcaatgttgtataaacataaagttt
tctttaaggttacagttgtgatatgccacatctgtctttgtttaaacata
tctctgcctgcttataattattgttatagtaatcttgtgtactcttgatc
atatgctatgtcttgacaggtaccagaaaataaaagaaaatctatgttta
agtagttagtatttgtgtttaattttgacatgtttggacaaatggcgtat
ttttcctcttttcctgcagaactgcctccctagtaattgttttgtatgaa
taaaaccataatatattttttcttcaactcctattcaatttctaatagtg
gatattaattgaatttgaggttatgagttattttaacgcatagaaattct
aaccttgca
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chrX_43469113_43470258
seq2: B6Ng01-280A22.g_69_1227

seq1  GAATTCTTTTGGTTTCCTGGATGTCCCAAGTTCTCTACCATTTCCCATAG  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTTTTGGTTTCCTGGATGTCCCAAGTTCTCTACCATTTCCCATAG  50

seq1  CTCATAGTGCTTTTTAAAATTGATACATGATGCACCCAAAAAATAAACAA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCATAGTGCTTTTTAAAATTGATACATGATGCACCCAAAAAATAAACAA  100

seq1  TATGTTCTCTCTATAGTAGCCCATGTAGAGAATGGAACTATTGAAATTTT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATGTTCTCTCTATAGTAGCCCATGTAGAGAATGGAACTATTGAAATTTT  150

seq1  TGGCAATCACATTCTCTTATTAACTGGGCTAACCTTCTACTAATATCTGT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGCAATCACATTCTCTTATTAACTGGGCTAACCTTCTACTAATATCTGT  200

seq1  TTTGGAAAACAAAAGTATCTATAGCATCAGAAGGTATTCATCCATGAATG  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTGGAAAACAAAAGTATCTATAGCATCAGAAGGTATTCATCCATGAATG  250

seq1  AATATTGAAAGTAGGATCCCTGCAATTGTTTTATTTGCCTTATTCACCTC  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATATTGAAAGTAGGATCCCTGCAATTGTTTTATTTGCCTTATTCACCTC  300

seq1  TAAATGTTCCATTAGGGTGTTTGTACTCCTTACTTTTGATTTACCCAATA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAATGTTCCATTAGGGTGTTTGTACTCCTTACTTTTGATTTACCCAATA  350

seq1  ACTCTTTTAATAATTAATGACAGTTAGGAATATAGATGAAATAAGGTCGC  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTCTTTTAATAATTAATGACAGTTAGGAATATAGATGAAATAAGGTCGC  400

seq1  TTATAAGTTCCATGGAACAATTTTAGAAATGGCATAAGATAATATTCAGG  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTATAAGTTCCATGGAACAATTTTAGAAATGGCATAAGATAATATTCAGG  450

seq1  GATTTGTAAAGCAGAGGCAATGTATAATATTGGAATATATATTATTGTAG  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATTTGTAAAGCAGAGGCAATGTATAATATTGGAATATATATTATTGTAG  500

seq1  ATTGTCATTTTCAAAGGCTCTTTTTTTTTCAAACTCTTCTACATACTATT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTGTCATTTTCAAAGGCTCTTTTTTTTTCAAACTCTTCTACATACTATT  550

seq1  AGTGTTCTATAAACATTGATTTGGATTTCTCTTTAACATGTATTTATTGA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTGTTCTATAAACATTGATTTGGATTTCTCTTTAACATGTATTTATTGA  600

seq1  AAATACATCATAAAATTTGGCCACTCATTTGTGTACACACTGGATCATGC  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAATACATCATAAAATTTGGCCACTCATTTGTGTACACACTGGATCATGC  650

seq1  TGGTATAGCAAAAGGAAGACTTTCTTTGATTTACTTGTGTTGACTTCTTT  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGTATAGCAAAAGGAAGACTTTCTTTGATTTACTTGTGTTGACTTCTTT  700

seq1  AAAACCAAGAGTATAAGTTTACAGAGTGATTTGTTGTTATTACCAGTACT  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAACCAAGAGTATAAGTTTACAGAGTGATTTGTTGTTATTACCAGTACT  750

seq1  GTCACTTAAAACCTTGCCTAGTAATGCAATGTTGTATAAACATAAAGTTT  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTCACTTAAAACCTTGCCTAGTAATGCAATGTTGTATAAACATAAAGTTT  800

seq1  TCTTTAAGGTTACAGTTGTGATATGCCACATCTGTCTTTGTTTAAACATA  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTTTAAGGTTACAGTTGTGATATGCCACATCTGTCTTTGTTTAAACATA  850

seq1  TCTCTGCCTGCTTATAATTATTGTTAATAGTAATCTTGTGTACTCTTGAT  900
      ||||||||||||||||||||||||| ||||||||||||||||||||||||
seq2  TCTCTGCCTGCTTATAATTATTGTT-ATAGTAATCTTGTGTACTCTTGAT  899

seq1  CATATGCTATGTCTTGACAGGTACCAG-AAATAAAAG-AAATCTATGTTT  948
      ||||||||||||||||||||||||||| ||||||||| ||||||||||||
seq2  CATATGCTATGTCTTGACAGGTACCAGAAAATAAAAGAAAATCTATGTTT  949

seq1  AAGTAG-TAGTATTTGTGTTT-ATTTTGACATGTTT-GACAAAT-GCGTA  994
      |||||| |||||||||||||| |||||||||||||| ||||||| |||||
seq2  AAGTAGTTAGTATTTGTGTTTAATTTTGACATGTTTGGACAAATGGCGTA  999

seq1  TTTTTCCTCTTTTCCTGCAG-ACTG-CTTCCTAGTAA-TGTTTTGTATGA  1041
      |||||||||||||||||||| |||| || |||||||| ||||||||||||
seq2  TTTTTCCTCTTTTCCTGCAGAACTGCCTCCCTAGTAATTGTTTTGTATGA  1049

seq1  TAAAAAC----ATATATATTTTCTTCAACT-CTA-TCAATTTCTAATAGT  1085
        |||||    |||||| |||||||||||| ||| |||||||||||||||
seq2  ATAAAACCATAATATATTTTTTCTTCAACTCCTATTCAATTTCTAATAGT  1099

seq1  GAATATTAA-TGAATATTGA-GTTATGAGTTAATTTATAGGATAGAAAAT  1133
      | ||||||| ||||| |||| ||||||||||| ||||  | |||||||  
seq2  GGATATTAATTGAAT-TTGAGGTTATGAGTTATTTTAACGCATAGAAA--  1146

seq1  TTAAAACCTTGCA  1146
      ||  |||||||||
seq2  TTCTAACCTTGCA  1159


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