BAC Information

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BAC

Clone NameB6Ng01-283O23
ChromosomeX (Build37)
Map Location 107,636,764 - 107,637,917
singlet/doubletsinglet
Overlap genenone
Upstream geneLOC245573, EG634340
Downstream geneLOC668530, LOC100043316, Pou3f4, Cylc1, LOC100042872, Rps6ka6
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-283O23.bB6Ng01-283O23.g
ACCGA082765GA082766
length1,2101,147
definitionB6Ng01-283O23.b B6Ng01-283O23.g
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattctttatttagctctgtaccccattttaatagttatttgtttctct
ggaatctaacttcttgagttctttttatatattggatattagccctctat
tggatgaacaataggtcaagatcgtttttcccattatgttggatgccatt
ttgtcctttgccttgcaaaagctttgcaattttatgaagtcccatctgtc
aatttttgatcttacagcataaacagttggtgttctgtttgggagctttc
cccctgtgccaatgtgttctaggattttctcaacattctcttctattatt
ttcagtgtatctgggtttatgtggagggcctttatccacttggatttgag
ctttgaacaaggagataagaatgaatccatttgcattcttctacacgatg
actgccagttgaaccagaaccatttgtcgaaaatgctatctttttttcca
ctggataccagttttagatcttttatcaaagatcaagagaccataggtgt
gtgggttcatttctgggtcttcagtcctattccactgatctacctgcctg
tctctgtcccaatactatacagctttttatcactattgctctgttataca
gcttgaggttagggatggtgattcccccagaagttcttttattgttgaga
atagttttggttatcctgtggtttttgttattacaaatggatttgcaaat
tgctctttctaacgctatgaaaaatcgatgtggaattttgatggggattg
cattgaatctatagattgcttttggcaagatggccatttttacttatatt
tatcctgccagtcaacaagtatgggtgatctttccatcttttgaggtctt
ctttgatttctttcttcagagacctgaagttcttgtcatatagatctttc
acttgcttggttagagtcataccaagttattttatattatttgtgactac
catgaaggtgtcatttctaaaatctcttttctcagcctttgtatccttga
gtagaggaaggctacttcatttaatttggagagatattttatattccagc
cacattgctgactcattcttttgttcacaactccttaatagaggaacaga
attctgggaagttttattggtatacgaatccatacctaggctggcgtata
cactcaataagctatcaagggtcactttcaagccagagtgtgtcacgatc
catggtgaca

gaattcttatttaatatttaagaatgtccttggattagatacctatctca
gacttgtggcaaaagtcaagaacagaagcagcataggaaagactactttt
ggctcatgttttttgaaatttcaatctatattagtattgaaggcatcaca
gagcagttcagtctatgccagtagatatatgagacataagatggctcatg
tcagtgtaactatgcaaacagaaactgggtagaagcagggacatataaac
tttaaagatcttctattagtgagctacttatatcccatttcctaaatgtt
ccacaacttaccaaagaagtgccacatactaaggaatgaacactaaaact
atgagcttgtatggaacattatattttcagactattcacaacttttatgg
aaagatacaatgtcatcagcatgtacagaaatggaaattgaatagacaca
tttataaatcttcccaaacttgtatttccattgctgtgacaaagaccata
actgaaagaatttggagaataaagaatttatttggcttacatattctaaa
acagttgaagaaagccaagtcaagagtgaaagtaagaatttgaggcacaa
acaaaagctgaggccactttactttctgacactattgaaagttagttgcc
aaggtatggcaccttctccagtggtctgggtcctcaaacatgaatcaata
agcaataaagtgtcccacagacttgcctccaggccaatctgactaaatca
tattaactgaggtttccttctctcacgtaactctagcatgtattaaccta
accaaaaattaatgagaatataaagtttctgaaatcactgatatactaaa
tataaataatgggctgaagttagacaaaagcatgtattaactttaaaaag
aaacagtagaagtttatccaactggtataagaaaatctggaatatttaca
tcttccccttggatatcattcatcctggattcaagggagcctgaattcac
atgttacaaaaaatgagataggaagtgttttatgagatgatcacattttt
taagtatagaacagttctttctattcaccactcatctatgttttcaatct
ggagtgtgttatctaatgctctgaggacttactaccttctcttgaat
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chrX_107636764_107637917
seq2: B6Ng01-283O23.g_67_1213

seq1  GAATTCTTATTTAATATTTAAGAATGTCCTTGGATTAGATACCTATCTCA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTTATTTAATATTTAAGAATGTCCTTGGATTAGATACCTATCTCA  50

seq1  GACTTGTGGCAAAAGTCAAGAACAGAAGCAGCATAGGAAAGACTACTTTT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GACTTGTGGCAAAAGTCAAGAACAGAAGCAGCATAGGAAAGACTACTTTT  100

seq1  GGCTCATGTTTTTTGAAATTTCAATCTATATTAGTATTGAAGGCATCACA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGCTCATGTTTTTTGAAATTTCAATCTATATTAGTATTGAAGGCATCACA  150

seq1  GAGCAGTTCAGTCTATGCCAGTAGATATATGAGACATAAGATGGCTCATG  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGCAGTTCAGTCTATGCCAGTAGATATATGAGACATAAGATGGCTCATG  200

seq1  TCAGTGTAACTATGCAAACAGAAACTGGGTAGAAGCAGGGACATATAAAC  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCAGTGTAACTATGCAAACAGAAACTGGGTAGAAGCAGGGACATATAAAC  250

seq1  TTTAAAGATCTTCTATTAGTGAGCTACTTATATCCCATTTCCTAAATGTT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTAAAGATCTTCTATTAGTGAGCTACTTATATCCCATTTCCTAAATGTT  300

seq1  CCACAACTTACCAAAGAAGTGCCACATACTAAGGAATGAACACTAAAACT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCACAACTTACCAAAGAAGTGCCACATACTAAGGAATGAACACTAAAACT  350

seq1  ATGAGCTTGTATGGAACATTATATTTTCAGACTATTCACAACTTTTATGG  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGAGCTTGTATGGAACATTATATTTTCAGACTATTCACAACTTTTATGG  400

seq1  AAAGATACAATGTCATCAGCATGTACAGAAATGGAAATTGAATAGACACA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAGATACAATGTCATCAGCATGTACAGAAATGGAAATTGAATAGACACA  450

seq1  TTTATAAATCTTCCCAAACTTGTATTTCCATTGCTGTGACAAAGACCATA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTATAAATCTTCCCAAACTTGTATTTCCATTGCTGTGACAAAGACCATA  500

seq1  ACTGAAAGAATTTGGAGAATAAAGAATTTATTTGGCTTACATATTCTAAA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTGAAAGAATTTGGAGAATAAAGAATTTATTTGGCTTACATATTCTAAA  550

seq1  ACAGTTGAAGAAAGCCAAGTCAAGAGTGAAAGTAAGAATTTGAGGCACAA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAGTTGAAGAAAGCCAAGTCAAGAGTGAAAGTAAGAATTTGAGGCACAA  600

seq1  ACAAAAGCTGAGGCCACTTTACTTTCTGACACTATTGAAAGTTAGTTGCC  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAAAAGCTGAGGCCACTTTACTTTCTGACACTATTGAAAGTTAGTTGCC  650

seq1  AAGGTATGGCACCTTCTCCAGTGGTCTGGGTCCTCAAACATGAATCAATA  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGGTATGGCACCTTCTCCAGTGGTCTGGGTCCTCAAACATGAATCAATA  700

seq1  AGCAATAAAGTGTCCCACAGACTTGCCTCCAGGCCAATCTGACTAAATCA  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCAATAAAGTGTCCCACAGACTTGCCTCCAGGCCAATCTGACTAAATCA  750

seq1  TATTAACTGAGGTTTCCTTCTCTCAGGTAACTCTAGCATGTATTAACCTA  800
      ||||||||||||||||||||||||| ||||||||||||||||||||||||
seq2  TATTAACTGAGGTTTCCTTCTCTCACGTAACTCTAGCATGTATTAACCTA  800

seq1  ACCAAAAATTAATGAGAATATAAAGTTTCTGAAATCACTGATATACTAAA  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCAAAAATTAATGAGAATATAAAGTTTCTGAAATCACTGATATACTAAA  850

seq1  TATAAATAAT-GGCTGAAGTTAGACAAAAGCATGTATTAACTTTAAAAAG  899
      |||||||||| |||||||||||||||||||||||||||||||||||||||
seq2  TATAAATAATGGGCTGAAGTTAGACAAAAGCATGTATTAACTTTAAAAAG  900

seq1  AAAACAGTAGAAAGTTTATCCAACTGGTATAAGAAAATCTGGAATAATTT  949
       ||||||||| |||||||||||||||||||||||||||||||||| ||||
seq2  -AAACAGTAG-AAGTTTATCCAACTGGTATAAGAAAATCTGGAAT-ATTT  947

seq1  ACATCTTCCCCTTGGATATCATTCATCCTGGATTCAAGGGGAGCCTGAAA  999
      ||||||||||||||||||||||||||||||||||||| ||||||||| ||
seq2  ACATCTTCCCCTTGGATATCATTCATCCTGGATTCAA-GGGAGCCTG-AA  995

seq1  TTCACATGTTAACAAAAAATGAAGATAGGAAGTGTTTTATGAGATGATCA  1049
      |||||||||| |||||||||| ||||||||||||||||||||||||||||
seq2  TTCACATGTT-ACAAAAAATG-AGATAGGAAGTGTTTTATGAGATGATCA  1043

seq1  CATTTTTTAAAGTATAG-ACATTTCTTTCTATCAACCACTCCATCTATGT  1098
      |||||||| |||||||| ||| ||||||||||  |||||| |||||||||
seq2  CATTTTTT-AAGTATAGAACAGTTCTTTCTATTCACCACT-CATCTATGT  1091

seq1  TTTTCATCT-GAGTGTG-TATCTAATGCTCTGAAAGATATTACTACTTCC  1146
      |||  |||| ||||||| ||||||||||||||  ||   ||||||| | |
seq2  TTTCAATCTGGAGTGTGTTATCTAATGCTCTG--AGGACTTACTACCTTC  1139

seq1  TCTTGAAT  1154
      ||||||||
seq2  TCTTGAAT  1147


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