BAC Information

Click to search

BAC

Clone NameB6Ng01-284H06
ChromosomeX (Build37)
Map Location 5,700,756 - 5,701,551
singlet/doubletsinglet
Overlap genenone
Upstream geneLOC668967, LOC434724, LOC100043935, LOC668968, LOC546182, Mycs, LOC668969, LOC668970, OTTMUSG00000016453, LOC627412, LOC436185, LOC668971, LOC100043936, LOC668972, Nudt11, LOC208428, AU022751
Downstream geneNudt10, Bmp15, Shroom4, LOC100043937, Dgkk, Ccnb3, Akap4
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-284H06.bB6Ng01-284H06.g
ACCGA083150GA083151
length7971,005
definitionB6Ng01-284H06.b B6Ng01-284H06.g
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattctctgtcagtttgagtactaagatcagctagaaatattcttacag
acacacctggaaacaacctttatctaggcacttaatatgccagtcagttt
ggcacattaacttagacaccatccagatgcaccttgtttattctaataga
tttgaatgatcatatggtttcatcttgagatctactttttaatttttcta
gtatgaagttctcagtttgtgttgatctgttaatggcttttattttgata
tcactaaaaatgttgctttgatgataatcatgaaccctgtatgggtctga
gctagggcctctgcctatgtgttatggttgtatcacttgatgttcttgtg
ggatgggagtgggtggtatctctgactctttaccctgcacttggcagtct
tttttcctactgggttgccttatccagccttaatatgagggtgtgtgtag
tcttattgtagcttgttatgctgtgtttggttgttatccctgggtggcct
gcctttttctgaagggaaaaggaggagtggatctaggggaaaaaggacat
gaagggagggagcaagaaaagaggagggaggagaaccagcagtctggatg
taatgaatgtaaggaataaaaaaatttaaaaatgttgctttgatttgcac
atgattctagtttcaaagaaactttttctttaatttttggactgagtgct
ttgaatatgtcagcctattggttggttggttggttgattgctttcattgt
tacttctggaaagtcaagagtaaatcctactaagcctgtgtatgcaa
gaattctattctttcctgagggaatagaatctacagaaattatttaagtt
cttatctacatgaaacttacctattatctcctatgtacatgcatattgaa
tcatttatgtctatcagtatggtctcaaaaattcttatttttatatttta
tatattagtgtcagtactctctatggttaaatcatataacaatatactac
ccagaaattttcccagttactaagtggtagatgatcaaatggcagcttta
ttttctactgagaaacaactttgttaagaaaactgcagtgctattttgac
ttcttttttttccaatttgtatccccttgatctccttttattgtcgaatt
tctctggctagcacttcaagtacaatgttgaataggtagggagaaagtgg
gtagccttgtctagtccctgattttagtgggattgcttccagcttctcat
catttactttgatgttggctactggtttgctgtagattgcttttatcatg
tttaggtatgggccttgaaatcctgatctttctaagacttttatcatgaa
tgggtgttggattttgtcaaatgttttctccgcatctaacgggatgatca
tgtggttttttgtctttgagtttgtttatatagtagattacgttgatgga
tttccctatattaaaccatccctgcatccctggaataaatccaacttggt
caggatggatgattgtttttgatgtgttcttggattcggttagcaagaat
tttattgagtatttttgcatcgatattcaaggggaaattgggtctgaagt
tctctatctttgttgggtttttctgtggtttaggtatcagagtaatttgt
ggcttcatagaatgagttgggtagagtaccttctgcatctattttgtgga
atagtttgtgcagagtggaattagatttgtcttttgaggtctgaatagaa
ctctgcactaaacccatcttggtccgtggaattttttttttttttttggg
ttggg
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chrX_5700756_5701551
seq2: B6Ng01-284H06.b_45_841

seq1  GAATTCTCTGTCAGTTTGAGTACTAAGATCAGCTAGAAATATTCTTACAG  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTCTGTCAGTTTGAGTACTAAGATCAGCTAGAAATATTCTTACAG  50

seq1  ACACACCTGGAAACAACCTTTATCTAGGCACTTAATATGCCAGTCAGTTT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACACACCTGGAAACAACCTTTATCTAGGCACTTAATATGCCAGTCAGTTT  100

seq1  GGCACATTAACTTAGACACCATCCAGATGCACCTTGTTTATTCTAATAGA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGCACATTAACTTAGACACCATCCAGATGCACCTTGTTTATTCTAATAGA  150

seq1  TTTGAATGATCATATGGTTTCATCTTGAGATCTACTTTTTAATTTTTCTA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTGAATGATCATATGGTTTCATCTTGAGATCTACTTTTTAATTTTTCTA  200

seq1  GTATGAAGTTCTCAGTTTGTGTTGATCTGTTAATGGCTTTTATTTTGATA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTATGAAGTTCTCAGTTTGTGTTGATCTGTTAATGGCTTTTATTTTGATA  250

seq1  TCACTAAAAATGTTGCTTTGATGATAATCATGAACCCTGTATGGGTCTGA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCACTAAAAATGTTGCTTTGATGATAATCATGAACCCTGTATGGGTCTGA  300

seq1  GCTAGGGCCTCTGCCTATGTGTTATGGTTGTATCACTTGATGTTCTTGTG  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTAGGGCCTCTGCCTATGTGTTATGGTTGTATCACTTGATGTTCTTGTG  350

seq1  GGATGGGAGTGGGTGGTATCTCTGACTCTTTACCCTGCACTTGGCAGTCT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGATGGGAGTGGGTGGTATCTCTGACTCTTTACCCTGCACTTGGCAGTCT  400

seq1  TTTTTCCTACTGGGTTGCCTTATCCAGCCTTAATATGAGGGTGTGTGTAG  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTTCCTACTGGGTTGCCTTATCCAGCCTTAATATGAGGGTGTGTGTAG  450

seq1  TCTTATTGTAGCTTGTTATGCTGTGTTTGGTTGTTATCCCTGGGTGGCCT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTTATTGTAGCTTGTTATGCTGTGTTTGGTTGTTATCCCTGGGTGGCCT  500

seq1  GCCTTTTTCTGAAGGGAAAAGGAGGAGTGGATCTAGGGGAAAAAGGACAT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCCTTTTTCTGAAGGGAAAAGGAGGAGTGGATCTAGGGGAAAAAGGACAT  550

seq1  GAAGGGAGGGAGCAAGAAAAGAGGAGGGAGGAGAACCAGCAGTCTGGATG  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAGGGAGGGAGCAAGAAAAGAGGAGGGAGGAGAACCAGCAGTCTGGATG  600

seq1  TAATGAATGTAAGGAATAAAAAAATTTAAAAATGTTGCTTTGATTTGCAC  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAATGAATGTAAGGAATAAAAAAATTTAAAAATGTTGCTTTGATTTGCAC  650

seq1  ATGATTCTAGTTTCAAAGAAACTTTTTCTTTAATTTTTGGACTGAGTGCT  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGATTCTAGTTTCAAAGAAACTTTTTCTTTAATTTTTGGACTGAGTGCT  700

seq1  TTGAATATGTCAGCCTATTGGTTGGTTGGTTGGTTGATTGCTTTCATTGT  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGAATATGTCAGCCTATTGGTTGGTTGGTTGGTTGATTGCTTTCATTGT  750

seq1  TACTTCTGGAAAGTCAAGAGTAAATCTTACTAAG-CTGTGTATGCAA  796
      |||||||||||||||||||||||||| ||||||| ||||||||||||
seq2  TACTTCTGGAAAGTCAAGAGTAAATCCTACTAAGCCTGTGTATGCAA  797