BAC Information

Click to search

BAC

Clone NameB6Ng01-284K16
ChromosomeX (Build37)
Map Location 110,265,606 - 110,266,759
singlet/doubletsinglet
Overlap geneChm
Upstream geneLOC622570, 4933403O08Rik, EG385407, Apool, Satl1, EG623341, 2010106E10Rik, Zfp711, Pof1b, LOC623412, EG623428, LOC100039112
Downstream geneEG664918, Dach2, LOC237016, EG664945
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-284K16.bB6Ng01-284K16.g
ACCGA083311GA083312
length1,1381,175
definitionB6Ng01-284K16.b B6Ng01-284K16.g
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattctttcatatccagagagcaaataccaaaaaaaagatatcaagagt
acctactctttgccctctaagccacaggcaagtgtttctaatctctatta
ctatttcccttgttccaagtagaaaaagaaactaccatcagccaacacaa
gatggaaagaaagcatccagtgatttgacaatatgcttagagctctctgg
aaatgtagtttaaagacaaaggaccatacagggtacatccctggaggaat
agaactcagtaaataaaatataaataaaacaagttagatattagtacttg
ctattcataaacaggaccagttcagatattgtctgtttgcctggagtgct
ttaaaatactgccagcctaaaagcaggctgtcatgtaataaatgtgtttg
ctttggtggagacattctttagattctctgaattggagttataaggctga
tattaaaaatcaaatctgttctatttgtactttctaattctgactgaact
tgtaactctggataagtaatgaaaaaaatcaaacccatgtctggagacaa
aatgatataatttgtacttcttggataatcgctagtctatctttgttctg
tgaaaccagtgtaaataaagaagcaatctgactgctagtcaaacagagct
gcaagatttccctaaccatagcaactgactcgcttctctctcttggactc
cttatctcctctagagagactataacaatggtcagggctggccccaaaca
gaaagaggtcaacattgagtatattcattaaaaggctgaaatgataaaag
atagaaaaaaacaatggcaaagctaaaaaataacactgcagaaatatatc
tgaatattactgagttacaacataaaaatcaacaagatgcagtttaaaga
caaattgtcaaacgaaagcaacaaacatcaggacagaagttgtagcttgc
cagttgaccatgtgcctattatacataaatcccttaatagatacaaagca
atttcctactcctcccactcacacacataacacacagggagagaggaaaa
gagaacatgtgtgcacactgtgtgtgtcatctatcgcttttaaaaccggt
accacggtctgcattccttcttggttacaaaccctgac

gaattcatactcagtattgtaatagccctggcctcatacctgtgactggt
catggaccaacagaagaacatactactgccagtttcttaaactaggatga
ttctcaattgcattttagatacctgtgtttatacccaaagttgtttatag
attgaagtatttctttctttcattgaaaatagatatttttatataatata
tcctgattatgcttttctctccctttaccccccctcagttcctccccacc
ttcccacccatccagatccatccactttgtgtctctcattagaaaacaaa
taggtgtctacgggacaataataaaatataatgaaataaaacaaagacaa
acacaactgaataaaaaaaatgaaacttaacaagcaaaaggtaaagagcc
caagaaaagataccagaaacaaacacttgtttgcacagttaggaacccat
aatcccataatatatacatcaaagatttgtagggtaagaaaagaaaaagt
aaataaaataatataaaaataagttaatttttttaaagccatgatttaat
attctgaaagagaaacctcaaaagatgccactgggttcattttctgttgg
ccatctactgttgagcatacagcctaatccttaagagctgttcatttccc
cagtgagactccctagaagaaaactaaattttcacttgcaagtagttgcc
aattagagatagcttctgggtgaggaataggagcatgtgttcactttccc
ttttagctctaggacccattccggtgcagacctgtgcaggcccctgagca
tgctagctcagtctttgtgcgttcatatgttcatctgtcatcttgagtct
aagaagaccctgttttctttgtgttctctagcccctctggctcttacact
ctgtgcctccctttcaacagtcttttttttactgatccctgaaaggagag
attttggtgaagacatcacatttagggctggagtgttccaaggtctctca
ctctctgcaataatgttctggcttgtgggtttctgcatctgtttcccatc
tgcctgaggagagcttcctcttatgaatgggcctgaaataacactgaatc
tatggaatacagcagatgtcattagaagttcgatgtttcaaggtttcacc
ttttccctgaactctgctattacag
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chrX_110265606_110266759
seq2: B6Ng01-284K16.b_47_1184

seq1  GAATTCTTTCATATCCAGAGAGCAAATACCAAAAAAAAGATATCAAGAGT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTTTCATATCCAGAGAGCAAATACCAAAAAAAAGATATCAAGAGT  50

seq1  ACCTACTCTTTGCCCTCTAAGCCACAGGCAAGTGTTTCTAATCTCTATTA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCTACTCTTTGCCCTCTAAGCCACAGGCAAGTGTTTCTAATCTCTATTA  100

seq1  CTATTTCCCTTGTTCCAAGTAGAAAAAGAAACTACCATCAGCCAACACAA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTATTTCCCTTGTTCCAAGTAGAAAAAGAAACTACCATCAGCCAACACAA  150

seq1  GATGGAAAGAAAGCATCCAGTGATTTGACAATATGCTTAGAGCTCTCTGG  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATGGAAAGAAAGCATCCAGTGATTTGACAATATGCTTAGAGCTCTCTGG  200

seq1  AAATGTAGTTTAAAGACAAAGGACCATACAGGGTACATCCCTGGAGGAAT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAATGTAGTTTAAAGACAAAGGACCATACAGGGTACATCCCTGGAGGAAT  250

seq1  AGAACTCAGTAAATAAAATATAAATAAAACAAGTTAGATATTAGTACTTG  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAACTCAGTAAATAAAATATAAATAAAACAAGTTAGATATTAGTACTTG  300

seq1  CTATTCATAAACAGGACCAGTTCAGATATTGTCTGTTTGCCTGGAGTGCT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTATTCATAAACAGGACCAGTTCAGATATTGTCTGTTTGCCTGGAGTGCT  350

seq1  TTAAAATACTGCCAGCCTAAAAGCAGGCTGTCATGTAATAAATGTGTTTG  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAAAATACTGCCAGCCTAAAAGCAGGCTGTCATGTAATAAATGTGTTTG  400

seq1  CTTTGGTGGAGACATTCTTTAGATTCTCTGAATTGGAGTTATAAGGCTGA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTTGGTGGAGACATTCTTTAGATTCTCTGAATTGGAGTTATAAGGCTGA  450

seq1  TATTAAAAATCAAATCTGTTCTATTTGTACTTTCTAATTCTGACTGAACT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATTAAAAATCAAATCTGTTCTATTTGTACTTTCTAATTCTGACTGAACT  500

seq1  TGTAACTCTGGATAAGTAATGAAAAAAATCAAACCCATGTCTGGAGACAA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTAACTCTGGATAAGTAATGAAAAAAATCAAACCCATGTCTGGAGACAA  550

seq1  AATGATATAATTTGTACTTCTTGGATAATCGCTAGTCTATCTTTGTTCTG  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATGATATAATTTGTACTTCTTGGATAATCGCTAGTCTATCTTTGTTCTG  600

seq1  TGAAACCAGTGTAAATAAAGAAGCAATCTGACTGCTAGTCAAACAGAGCT  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAAACCAGTGTAAATAAAGAAGCAATCTGACTGCTAGTCAAACAGAGCT  650

seq1  GCAAGATTTCCCTAACCATAGCAACTGACTCGCTTCTCTCTCTTGGACTC  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCAAGATTTCCCTAACCATAGCAACTGACTCGCTTCTCTCTCTTGGACTC  700

seq1  CTTATCTCCTCTAGAGAGACTATAACAATGGTCAGGGCTGGCCCCAAACA  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTATCTCCTCTAGAGAGACTATAACAATGGTCAGGGCTGGCCCCAAACA  750

seq1  GAAAGAGGTCAACATTGAGTATATTCATTAAAAGGCTGAAATGATAAAAG  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAAGAGGTCAACATTGAGTATATTCATTAAAAGGCTGAAATGATAAAAG  800

seq1  ATAGAAAAAAACAATGGCAAAGCTAAAAAATAACACTGCAGAAATATATC  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATAGAAAAAAACAATGGCAAAGCTAAAAAATAACACTGCAGAAATATATC  850

seq1  TGAATATTACTGAGTTACAACATAAAAATCAACAAGATGCAGTTTAAAGA  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAATATTACTGAGTTACAACATAAAAATCAACAAGATGCAGTTTAAAGA  900

seq1  CAAATTGTCAAACGAAGGCAACAAACATCAGGACAGAAGTTGTAGCTTGC  950
      |||||||||||||||| |||||||||||||||||||||||||||||||||
seq2  CAAATTGTCAAACGAAAGCAACAAACATCAGGACAGAAGTTGTAGCTTGC  950

seq1  CAGTTGACCATGTGCCTATTATACATAAATCCCTTAATTAGATACAAAGC  1000
      ||||||||||||||||||||||||||||||||||||| ||||||||||||
seq2  CAGTTGACCATGTGCCTATTATACATAAATCCCTTAA-TAGATACAAAGC  999

seq1  AATTTCCCTACCCCCCCCCCCACTCACACACAT-ACACACAGGGGAGGAA  1049
      ||||| ||||   | || ||||||||||||||| ||||||||||     |
seq2  AATTT-CCTA---CTCCTCCCACTCACACACATAACACACAGGG-----A  1040

seq1  GGGAGGGAAAAAGAGAAACATGTGTGCACACTGTGTGTGTCATCTACTGC  1099
      | ||||  ||||||| ||||||||||||||||||||||||||||||  ||
seq2  GAGAGG--AAAAGAG-AACATGTGTGCACACTGTGTGTGTCATCTATCGC  1087

seq1  TTTTTAAAAACGGTA-CACGGTTCTGCTTTCTTTTCTATGGTGATAAAAC  1148
       |||||||| ||||| ||||| ||||| |||  |||| |||| |  ||||
seq2  -TTTTAAAACCGGTACCACGG-TCTGCATTC-CTTCT-TGGTTA-CAAAC  1132

seq1  CCTGAC  1154
      ||||||
seq2  CCTGAC  1138


| Home | SequenceCutter | Blast | Download |