BAC Information

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BAC

Clone NameB6Ng01-285B22
ChromosomeX (Build37)X (Build37)
Map Location 64,604,352 - 64,605,00844,352,406 - 44,352,691
singlet/doubletsingletsinglet
Overlap genenone
Upstream geneSlitrk2, LOC666824, LOC627734, EG666828
Downstream geneGm1140, LOC666842, LOC619873, 4933436I01Rik, LOC100040194, EG236844, LOC385372
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-285B22.bB6Ng01-285B22.g
ACCGA083648GA083649
length1,1461,097
definitionB6Ng01-285B22.b B6Ng01-285B22.g
singlet/doubletsingletsinglet
BLAST hituniqueunique
Map location.(64,604,352 - 64,605,008)(44,352,406 - 44,352,691)
sequence
gaattcagacagatgtgatattggaggagctaagagttctacatcttgat
cagcaggcagcagaagttgaggctgtgtgccatacagggtaaatgaaaca
gacctcaaagctggccctcagagtaacacacttcctccaataaggtcaca
cctacttcaacaaggccacacttcctaatagtgctactccctatgggcca
agcattcaaatggatgtgtacatgaggaccatacatattcaaatcatcac
agctacaaaggaggtaagcaaacaacagtcctattcttatgttgtaccca
ttatctgcaacaaggaccaacatggcaccataaacctaagggttatattt
aacacatgcttattttgttataacaactctaagtggacttaaggcccact
aaacatgaaggtaacagtggctggtactggaagcatagccaatttcccag
ggctagtaaagtcatggatcagagaggataaactacaaccaccattttaa
tgacccaaaattatctctaagtgcattcttaattgtccttatactgacag
ataagcatagttgtcgccactcattaaggacagttttcttttcaataaag
ataaattgttacaaaaacccacaaataacactaatttagagttgtagaat
tcagttccattggatacatctataaaacacacctaaagttcagggatcat
tgctaaataagtagtagaaatatagtaatatccaaatgatgagggaattt
tctatgagactatatattcctagtaatgtcaaaagctacacctataaagt
ctcagcaacacgactgcctaaacatgagctagacaaggacaacaatagac
atactaaaatggatgggagaaagctcatgatgcctcagctatagacaaag
ttctacaagcaactaaagaacaccaagagaggaggaaatagtctttaggg
aagagcataccaatcgggttatctgattctcagtagtcattacaccaact
gagctgctcatattaagaatgtatactatctcttcatagcaataaaactc
tgactaagacaaatgttggtaccaaggactagaagtatgatgtgataggc
tgaaccatttttttgtttagaggaatttggatttgagaccttggat
gaattcaaggcccatatgtaaacatagtaaaagcaagagacagtaaacca
gtagctaccatcaagctaaatggagagaaaattgaagcaatctaactaaa
atcaggggctaggcaaggctgcccactctttccctaactattccttatag
tactcaaagtcctagacagagcaattagacaacaaaaggagaccaaaggg
atacaaattggaaaggaagaagtcaaaatatcactatttgcagatgatat
gatagtatacatatgtgacctcaaaaattctaccagagaactcctaaaca
ggataaacaacttcagtgaattagttggatataatatttactcaaacaaa
tcagtggcctctttctaaacaaaggataaaacaggctgagaaagaaatta
gggaaacaacacccttcacaagactcacaaataatataaaatgtcttggt
gtgaatctgactaagcaagtgaaagatctctatgataagaactacaagtc
tctgaagaaagaaatcaaagaagatctcagaaggtggaaagatctcccat
gttcatggattaacaggattaatatagtaaaaatggccatcttgccaaaa
gctatctacctatgcaatgcaatccccatcaaaatttcaactcaattttt
catagatttagaaagagcaatttccaaattcatctggaataacaaaaacc
caggatagtgcaaacttctcaacaataaaagaacttctgggggaatcacc
atccctgatctcaagctgtactacagaacaattgtgataaaaactgcata
gtattggtatagtgacaggcaggtcaattaggattcccacatgttgctca
tgtcagcacacatttgcctcccaggtttgagaagtgattcggaggagcta
tgctattgctagaaatgaggagtatttccatcaatcagcttcactgacct
tgctgtaaaggatgaataccttcttcagatgtcttggaccttgtctgtat
cagagtcttacaaatagtctaactaaaatattcagaaatttaatgtgatg
acattgggactcagtgttgtagacttttcatctacatgttctacttc
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chrX_64604352_64605008
seq2: B6Ng01-285B22.b_533_1189

seq1  CACCATTTTAATGACCCAAAATTATCTCTAAGTGCATTCTTAATTGTCCT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACCATTTTAATGACCCAAAATTATCTCTAAGTGCATTCTTAATTGTCCT  50

seq1  TATACTGACAGATAAGCATAGTTGTCGCCACTCATTAAGGACAGTTTTCT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATACTGACAGATAAGCATAGTTGTCGCCACTCATTAAGGACAGTTTTCT  100

seq1  TTTCAATAAAGATAAATTGTTACAAAAACCCACAAATAACACTAATTTAG  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTCAATAAAGATAAATTGTTACAAAAACCCACAAATAACACTAATTTAG  150

seq1  AGTTGTAGAATTCAGTTCCATTGGATACATCTATAAAACACACCTAAAGT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTTGTAGAATTCAGTTCCATTGGATACATCTATAAAACACACCTAAAGT  200

seq1  TCAGGGATCATTGCTAAATAAGTAGTAGAAATATAGTAATATCCAAATGA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCAGGGATCATTGCTAAATAAGTAGTAGAAATATAGTAATATCCAAATGA  250

seq1  TGAGGGAATTTTCTATGAGACTATATATTCCTAGTAATGTCAAAAGCTAC  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAGGGAATTTTCTATGAGACTATATATTCCTAGTAATGTCAAAAGCTAC  300

seq1  ACCTATAAAGTCTCAGCAACACGACTGCCTAAACATGAGCTAGACAAGGA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCTATAAAGTCTCAGCAACACGACTGCCTAAACATGAGCTAGACAAGGA  350

seq1  CAACAATAGACATACTAAAATGGATGGGAGAAAGCTCATGATGCCTCAGC  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAACAATAGACATACTAAAATGGATGGGAGAAAGCTCATGATGCCTCAGC  400

seq1  TATAGACAAAGTTCTACAAGCAACTAAAGAACACCAAGAGAGGAGGAAAT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATAGACAAAGTTCTACAAGCAACTAAAGAACACCAAGAGAGGAGGAAAT  450

seq1  AGTCTTTAGGGAAGAGCATACCAATC-GGTTATCTGATTCTCAGTAGTCA  499
      |||||||||||||||||||||||||| |||||||||||||||||||||||
seq2  AGTCTTTAGGGAAGAGCATACCAATCGGGTTATCTGATTCTCAGTAGTCA  500

seq1  TTACACCAACTGAGCTGCTCATATTAAGAATGTATACTATCTCTTCATAG  549
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTACACCAACTGAGCTGCTCATATTAAGAATGTATACTATCTCTTCATAG  550

seq1  CAATAAAACTCTGACTAAGACAAAGGTTGGTACCAAGGACTAG-AGTATT  598
      |||||||||||||||||||||||| |||||||||||||||||| |||| |
seq2  CAATAAAACTCTGACTAAGACAAATGTTGGTACCAAGGACTAGAAGTA-T  599

seq1  GATGTGATAGGGCTG-ACCATTTTTTTGTTTAGAGGAAATTGGATTTGAG  647
      ||||||||| ||||| |||||||||||||||||||||| |||||||||| 
seq2  GATGTGATA-GGCTGAACCATTTTTTTGTTTAGAGGAATTTGGATTTGA-  647

seq1  GACTTTGGAT  657
      ||| ||||||
seq2  GACCTTGGAT  657

seq1: chrX_44352406_44352691
seq2: B6Ng01-285B22.g_884_1160

seq1  AGGTC--TTAGGATTCCCACATGTTGCTCATGTCAGCACACATTTGCCTC  48
      |||||  |||||||||||||||||||||||||||||||||||||||||||
seq2  AGGTCAATTAGGATTCCCACATGTTGCTCATGTCAGCACACATTTGCCTC  50

seq1  CCAGTTTTGAGAAGTGACTCAGAGGAGCTATGCTATTGCTAGAAATGAGG  98
      |||| |||||||||||| || |||||||||||||||||||||||||||||
seq2  CCAGGTTTGAGAAGTGATTCGGAGGAGCTATGCTATTGCTAGAAATGAGG  100

seq1  AGTATATCCATCAGTCAGCTGCACTGACCTTGCTGT-AGGGATGAATACA  147
      ||||| ||||||| |||||| ||||||||||||||| | |||||||||| 
seq2  AGTATTTCCATCAATCAGCTTCACTGACCTTGCTGTAAAGGATGAATACC  150

seq1  TTCTTCAGGATTCCTTGGACCTTGTCTGTGTCAAGAGTCTTACAAATGGT  197
      ||||||| |||  |||||||||||||||| || |||||||||||||| ||
seq2  TTCTTCA-GATGTCTTGGACCTTGTCTGTATC-AGAGTCTTACAAATAGT  198

seq1  CTAACTAAAATACATCAGGAAATTTAATGTGATGACAATTTGGGACTCGG  247
      ||||||||||||  ||| |||||||||||||||||||  |||||||||  
seq2  CTAACTAAAATA-TTCA-GAAATTTAATGTGATGACA--TTGGGACTC-A  243

seq1  GTGGTTTGTAGGACTTTTCCAATCCTACATG-TCTACTTC  286
      |||  ||||| ||||||||  || ||||||| ||||||||
seq2  GTG--TTGTA-GACTTTTC--AT-CTACATGTTCTACTTC  277