BAC Information

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BAC

Clone NameB6Ng01-285M10
ChromosomeX (Build37)
Map Location 38,704,021 - 38,705,115
singlet/doubletsinglet
Overlap genenone
Upstream geneLOC100039769, LOC385344
Downstream geneGria3, LOC100039802, LOC676077, Thoc2, LOC665488, EG333830, LOC100039838, Birc4, Stag2
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-285M10.bB6Ng01-285M10.g
ACCGA084139GA084140
length1,2051,095
definitionB6Ng01-285M10.b B6Ng01-285M10.g
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattctcacctgaggaataccgaatggctgagaagcacatgaaaaaatg
ttcagtatccttaatcatcagggaaatgcaaatcaaaacagccctgagat
ttcatctcaaaccagtcattatgtctaagatcaaaaatttaggtgacagt
agatgctggcgaggatgtggagaaagaggaacactcctccatttctggtg
ggattgcaagcttgtacaaccactctggaaatcagtctggcggttcctca
gaaaattggacatagtactactggatgattccgcaatacctctttgggca
tatatccagaagatgttccaactggtaagaaagacacatgctccactatg
ttcatagcagccttatttataataggcagaagctggaaaatacccagatg
cccctcaacacaggaatggatacagaaaatgtggtacatttacacaatgg
agtactactcagctattaaaaaatgaatttatgaaattcctaggcaaatg
ggttgtcctggatggcttcatcctgagtgaggtaacccaatcatcacaaa
agaactcacatgacatgtactcactgataagtggatattagcccagaaac
ttagaatccccaagatacaaagcacatgaaactcaagaataacgaagacc
aaagtgtggacactttgccccttcttagaattgggaacaaaacacttatg
gaaggagttacagagacaaagtttggagctgagacaaaaggatggaccat
ctagagacgaccatatccggggatccatcttataatcagctgccaaatgc
agacacgattgcatatactagcaagatcttgctgaaaggaccctgatata
cctgtctcttgtgagactatgccggggcctagcaaacatagaagtggatg
ctcacaatcaggtattggatggatcacagggcccccaatggaggagctag
agaaagtatccaaggagctaaagggacacctgcaaccctataggtggaac
aacatatgaacttacagtactccttgagctcgtgtctcttgctgcaatgt
tagcagagatggcctagttggccatcactgaaagaagagtccattggttc
gttgcaaacctttaatatgctcagtacagggaaatgccatgtccagagtt
gggaactgggttggtacagaagaatctcactcagacgtcaggacttgcta
ctagc
gaattctatagattcaataatggggcataaagaaacatgaataaacaaag
tatacatataaaatgccataatgaacctgttattttatatgcaaacttta
aattttaatttaaaaaataggtgtgaaaatgacaacagcaacaataaaca
aatcttttaaagaattttaatggagaacaagaaaatggtgcaatatttaa
agagaaatgtgcaatcaatgaaaatacagaagtgcattcatgtagagagt
agacaatcacagattacaaagaaaattgatgatgcagaacaaagaagaaa
taatagcaggtgaagagtccttgagaagtcaggaacagaacaaatgaaag
gactagcagtggatggaagcaaaacaaacccattaaatttagttaggtat
atttattataaaggtaaagaaaattcttttagaatatttacataagtgta
tatagatagacgttttggttttacttttgatgaaatggaagcatttagag
cttttgatgaaatgacagtttcagggtagaaaagctgaaagaggcaaata
tgaaaaggcaatattgtagaatatcaatattaagtttgaaatttgaggac
aaatatagtcaatattaagtttgaaatttgaagacattaatttaaaataa
gacctctcagtagatgctgtaacaaataactagttaccttacagctctgt
gagacagagccctaacttgagtgatacccagataaaaccatgacacccag
ggagatgctgtcctttcagaagctttggggaataatccattttcttgact
catcgagtgcttcttggtttcatgtcctgcccttccttatcttcagttct
agcaactctgaatgtttctcatataaaaccctcttggtcctcttcatttg
ttgtatcccaccaaatgtagctgagaaacatttccccactttttacagtt
catagaattaaattcaagaaattctccccatatcaagcaaggtctatatg
ataatcataatacataaaatcctttttgttataaagattatatagtcacg
gttcttggatagtgatttaaagacagattttggaggctctttctc
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chrX_38704021_38705115
seq2: B6Ng01-285M10.g_67_1161

seq1  GAATTCTATAGATTCAATAATGGGGCATAAAGAAACATGAATAAACAAAG  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTATAGATTCAATAATGGGGCATAAAGAAACATGAATAAACAAAG  50

seq1  TATACATATAAAATGCCATAATGAACCTGTTATTTTATATGCAAACTTTA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATACATATAAAATGCCATAATGAACCTGTTATTTTATATGCAAACTTTA  100

seq1  AATTTTAATTTAAAAAATAGGTGTGAAAATGACAACAGCAACAATAAACA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATTTTAATTTAAAAAATAGGTGTGAAAATGACAACAGCAACAATAAACA  150

seq1  AATCTTTTAAAGAATTTTAATGGAGAACAAGAAAATGGTGCAATATTTAA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATCTTTTAAAGAATTTTAATGGAGAACAAGAAAATGGTGCAATATTTAA  200

seq1  AGAGAAATGTGCAATCAATGAAAATACAGAAGTGCATTCATGTAGAGAGT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAGAAATGTGCAATCAATGAAAATACAGAAGTGCATTCATGTAGAGAGT  250

seq1  AGACAATCACAGATTACAAAGAAAATTGATGATGCAGAACAAAGAAGAAA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGACAATCACAGATTACAAAGAAAATTGATGATGCAGAACAAAGAAGAAA  300

seq1  TAATAGCAGGTGAAGAGTCCTTGAGAAGTCAGGAACAGAACAAATGAAAG  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAATAGCAGGTGAAGAGTCCTTGAGAAGTCAGGAACAGAACAAATGAAAG  350

seq1  GACTAGCAGTGGATGGAAGCAAAACAAACCCATTAAATTTAGTTAGGTAT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GACTAGCAGTGGATGGAAGCAAAACAAACCCATTAAATTTAGTTAGGTAT  400

seq1  ATTTATTATAAAGGTAAAGAAAATTCTTTTAGAATATTTACATAAGTGTA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTTATTATAAAGGTAAAGAAAATTCTTTTAGAATATTTACATAAGTGTA  450

seq1  TATAGATAGACGTTTTGGTTTTACTTTTGATGAAATGGAAGCATTTAGAG  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATAGATAGACGTTTTGGTTTTACTTTTGATGAAATGGAAGCATTTAGAG  500

seq1  CTTTTGATGAAATGACAGTTTCAGGGTAGAAAAGCTGAAAGAGGCAAATA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTTTGATGAAATGACAGTTTCAGGGTAGAAAAGCTGAAAGAGGCAAATA  550

seq1  TGAAAAGGCAATATTGTAGAATATCAATATTAAGTTTGAAATTTGAGGAC  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAAAAGGCAATATTGTAGAATATCAATATTAAGTTTGAAATTTGAGGAC  600

seq1  AAATATAGTCAATATTAAGTTTGAAATTTGAAGACATTAATTTAAAATAA  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAATATAGTCAATATTAAGTTTGAAATTTGAAGACATTAATTTAAAATAA  650

seq1  GACCTCTCAGTAGATGCTGTAACAAATAACTAGTTACCTTACAGCTCTGT  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GACCTCTCAGTAGATGCTGTAACAAATAACTAGTTACCTTACAGCTCTGT  700

seq1  GAGACAGAGCCCTAACTTGAGTGATACCCAGATAAAACCATGACACCCAG  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGACAGAGCCCTAACTTGAGTGATACCCAGATAAAACCATGACACCCAG  750

seq1  GGAGATGCTGTCCTTTCAGGAAGCTTTGGGGAATAATCCATTTTCTTGAC  800
      |||||||||||||||||| |||||||||||||||||||||||||||||||
seq2  GGAGATGCTGTCCTTTCA-GAAGCTTTGGGGAATAATCCATTTTCTTGAC  799

seq1  TCATCGAGTGCTTCTTGG-TTCATGTCCTGCCCTTCCTTATCTTCAGTTC  849
      |||||||||||||||||| |||||||||||||||||||||||||||||||
seq2  TCATCGAGTGCTTCTTGGTTTCATGTCCTGCCCTTCCTTATCTTCAGTTC  849

seq1  TAGCAACTCTGAATGTTTCTCATATAAAA-CCTCTTGGTCCTCTTCAATT  898
      ||||||||||||||||||||||||||||| ||||||||||||||||| ||
seq2  TAGCAACTCTGAATGTTTCTCATATAAAACCCTCTTGGTCCTCTTCATTT  899

seq1  GTTGTATCCCACCAAATGTAGCTGAGAAACA-TTCCCCAC-TTTTACAGT  946
      ||||||||||||||||||||||||||||||| |||||||| |||||||||
seq2  GTTGTATCCCACCAAATGTAGCTGAGAAACATTTCCCCACTTTTTACAGT  949

seq1  TCATAGAATTAAATTCAAGAAATTCTCCCCATATCAAGCAAGGTCTATAA  996
      |||||||||||||||||||||||||||||||||||||||||||||||| |
seq2  TCATAGAATTAAATTCAAGAAATTCTCCCCATATCAAGCAAGGTCTAT-A  998

seq1  TGATAATCAT-ATACATAAAATCCTTTTTGTTATAAAGATTATATAGTCA  1045
      |||||||||| |||||||||||||||||||||||||||||||||||||||
seq2  TGATAATCATAATACATAAAATCCTTTTTGTTATAAAGATTATATAGTCA  1048

seq1  CGGGTTCTT-GATAGTGGTTTATAGACAGATTTTGGAGGCTTCCTTTTCT  1094
      | ||||||| ||||||| |||| ||||||||||||||||||    |||||
seq2  C-GGTTCTTGGATAGTGATTTAAAGACAGATTTTGGAGGCT---CTTTCT  1094

seq1  C  1095
      |
seq2  C  1095