MoG+ -Mouse Genome database with high added value-

BAC Information

BAC name
Region	Chromosome -
Gene	search by nearby gene name.
Format	rows / page	Page	1

BAC

Clone Name	B6Ng01-287B09
Chromosome	X (Build37)
Map Location	162,575,892 - 162,576,606
singlet/doublet	singlet
Overlap gene	none
Upstream gene	Glra2, LOC100040753
Downstream gene	Gemin8, Gpm6b, Ofd1, Trappc2, Rab9, LOC100040795, A630018P17Rik, Egfl6, LOC100041912, LOC641660, LOC667791, EG667794, LOC100040850, LOC627268
Link	Open Mouse BAC browser

Click to get alignment info.

name	Glra2 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:237213 MGI:95748
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	LOC100040753 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:100040753
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 mRNA, 4 ESTs

name	Gemin8 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:237221 MGI:2384300
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Gpm6b (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:14758 MGI:107672
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Ofd1 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:237222 MGI:1350328
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Trappc2 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:66226 MGI:1913476
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Rab9 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:56382 MGI:1890695
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	LOC100040795 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:100040795
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 Protein pseudo : _no_value

name	A630018P17Rik (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:245695 MGI:2685236
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Egfl6 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:54156 MGI:1858599
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	LOC100041912 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:100041912
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 EST

name	LOC641660 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:641660
definition	note : ribosomal protein L7a pseudogene pseudo : _no_value

name	LOC667791 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:667791
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 10 Proteins pseudo : _no_value

name	EG667794 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:667794 MGI:3648637
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 2 ESTs

name	LOC100040850 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:100040850
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 EST

name	LOC627268 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:627268
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 mRNA, 1 EST

name	Glra2 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:142373644 GeneID:237213 MGI:95748
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : glycine receptor, alpha 2 subunit transcript_id : NM_183427.3

name	LOC100040753 (CDS detail)
type	mRNA
link	vega ensembl NCBI
xref	GI:149272509 GeneID:100040753
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 mRNA, 4 ESTs product : similar to pol protein transcript_id : XM_001475185.1

name	Gemin8 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:125628630 GeneID:237221 MGI:2384300
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : gem (nuclear organelle) associated protein 8 transcript_id : NM_146238.3

name	Gpm6b (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:118130376 GeneID:14758 MGI:107672
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : glycoprotein m6b transcript_id : NM_023122.2

name	Ofd1 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:31342288 GeneID:237222 MGI:1350328
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : oral-facial-digital syndrome 1 gene homolog (human) transcript_id : NM_177429.2

name	Trappc2 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:142388246 GeneID:66226 MGI:1913476
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : trafficking protein particle complex 2 transcript_id : NM_025432.2

name	Rab9 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:9790226 GeneID:56382 MGI:1890695
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : RAB9, member RAS oncogene family transcript_id : NM_019773.1

name	A630018P17Rik (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:56090649 GeneID:245695 MGI:2685236
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : RIKEN cDNA A630018P17 gene transcript_id : NM_001007577.1

name	Egfl6 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:142377711 GeneID:54156 MGI:1858599
definition	exception : mismatches in transcription note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : EGF-like-domain, multiple 6 transcript_id : NM_019397.2

name	LOC100041912 (CDS detail)
type	mRNA
link	vega ensembl NCBI
xref	GI:149272532 GeneID:100041912
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 EST product : hypothetical protein LOC100041912 transcript_id : XM_001477511.1

name	EG667794 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:94408484 GeneID:667794 MGI:3648637
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 2 ESTs product : predicted gene, EG667794 transcript_id : XM_992520.1

name	LOC100040850 (CDS detail)
type	mRNA
link	vega ensembl NCBI
xref	GI:149272511 GeneID:100040850
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 EST product : hypothetical protein LOC100040850 transcript_id : XM_001475388.1

name	LOC627268 (CDS detail)
type	mRNA
link	vega ensembl NCBI
xref	GI:149272534 GeneID:627268
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 mRNA, 1 EST product : hypothetical protein LOC627268 transcript_id : XM_001477546.1

name	Glra2 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:34556195 GeneID:237213 MGI:95748
definition	GO_component : GO:0016021 - integral to membrane [Evidence IEA]; GO:0016020 - membrane [Evidence IEA]; GO:0005624 - membrane fraction [Evidence IEA]; GO:0045211 - postsynaptic membrane [Evidence IEA] GO_function : GO:0005254 - chloride channel activity [Evidence IEA]; GO:0031404 - chloride ion binding [Evidence IEA]; GO:0005230 - extracellular ligand-gated ion channel activity [Evidence IEA]; GO:0004890 - GABA-A receptor activity [Evidence IEA]; GO:0016934 - glycine-gated chloride channel activity [Evidence IEA]; GO:0005216 - ion channel activity [Evidence IEA]; GO:0030594 - neurotransmitter receptor activity [Evidence IEA]; GO:0004872 - receptor activity [Evidence IEA] GO_process : GO:0006821 - chloride transport [Evidence IEA]; GO:0006811 - ion transport [Evidence IEA]; GO:0007268 - synaptic transmission [Evidence IEA]; GO:0006810 - transport [Evidence IEA] codon_start : 1 product : glycine receptor, alpha 2 subunit protein_id : NP_906272.1

name	LOC100040753 (CDS detail)
type	CDS
link	vega ensembl NCBI
xref	GI:149272510 GeneID:100040753
definition	codon_start : 1 product : similar to pol protein protein_id : XP_001475235.1

name	Gemin8 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:31559907 GeneID:237221 MGI:2384300
definition	codon_start : 1 product : gem (nuclear organelle) associated protein 8 protein_id : NP_666350.2

name	Gpm6b (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:12963495 CCDS:CCDS30526.1 GeneID:14758 MGI:107672
definition	GO_component : GO:0016020 - membrane [Evidence IEA] codon_start : 1 product : glycoprotein m6b protein_id : NP_075611.1

name	Ofd1 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:28933461 GeneID:237222 MGI:1350328
definition	GO_component : GO:0005932 - basal body [Evidence ISS]; GO:0005813 - centrosome [Evidence ISS] GO_function : GO:0003674 - molecular_function [Evidence ND] GO_process : GO:0035083 - cilium axoneme biogenesis [Evidence IMP] codon_start : 1 product : oral-facial-digital syndrome 1 gene homolog protein_id : NP_803178.1

name	Trappc2 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:13384832 GeneID:66226 MGI:1913476
definition	codon_start : 1 exception : mismatches in translation note : spondyloepiphyseal dysplasia, late; spondyloepiphyseal dysplasia tarda protein product : trafficking protein particle complex 2 protein_id : NP_079708.1

name	Rab9 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:9790227 CCDS:CCDS30527.1 GeneID:56382 MGI:1890695
definition	GO_component : GO:0005770 - late endosome [Evidence ISS]; GO:0005764 - lysosome [Evidence ISS]; GO:0016020 - membrane [Evidence IEA] GO_function : GO:0005525 - GTP binding [Evidence IEA]; GO:0000166 - nucleotide binding [Evidence IEA] GO_process : GO:0006810 - transport [Evidence IEA] codon_start : 1 note : SID 99 product : RAB9, member RAS oncogene family protein_id : NP_062747.1

name	A630018P17Rik (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:56090650 GeneID:245695 MGI:2685236
definition	GO_function : GO:0003746 - translation elongation factor activity [Evidence IEA] GO_process : GO:0006350 - transcription [Evidence IEA] codon_start : 1 exception : unclassified translation discrepancy product : hypothetical protein LOC245695 protein_id : NP_001007578.1

name	Egfl6 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:9506563 CCDS:CCDS30528.1 GeneID:54156 MGI:1858599
definition	GO_function : GO:0005509 - calcium ion binding [Evidence IEA] codon_start : 1 product : EGF-like-domain, multiple 6 protein_id : NP_062270.1

name	LOC100041912 (CDS detail)
type	CDS
link	vega ensembl NCBI
xref	GI:149272533 GeneID:100041912
definition	codon_start : 1 product : hypothetical protein protein_id : XP_001477561.1

name	EG667794 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:94408485 GeneID:667794 MGI:3648637
definition	codon_start : 1 product : hypothetical protein protein_id : XP_997614.1

name	LOC100040850 (CDS detail)
type	CDS
link	vega ensembl NCBI
xref	GI:149272512 GeneID:100040850
definition	codon_start : 1 product : hypothetical protein protein_id : XP_001475438.1

name	LOC627268 (CDS detail)
type	CDS
link	vega ensembl NCBI
xref	GI:149272535 GeneID:627268
definition	codon_start : 1 product : hypothetical protein protein_id : XP_001477596.1

name	LOC100040795 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:100040795
definition	number : 1 pseudo : _no_value

name	LOC100040795 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:100040795
definition	number : 2 pseudo : _no_value

name	LOC667791 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:667791
definition	number : 1 pseudo : _no_value

clone name	MSMg01-498P19
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-067C24
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-377G15
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-368J12
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-324M18
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-435K21
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-119M23
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-215K11
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-290G01
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-304L14
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-112A10
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-476L21
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-544E05
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-521L23
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-304M08
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-344F22
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-052F20
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-516D08
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-400I22
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-537C24
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-125P10
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-389H02
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-157A05
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-119J13
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-321K18
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-348M03
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-167B09
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-505B20
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-417A20
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-317B16
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-173J04
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-508A23
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-122O17
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-457F20
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-487M17
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-324N17
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-088P01
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-292O05
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-209K21
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-108N04
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-329N16
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-277O04
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-011E14
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-310K16
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-147I23
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-230C03
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-113I22
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-240G19
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-288L19
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-023G23
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-292J12
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-162N22
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-149M07
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-266N02
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-181M13
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-281K15
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-201O06
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-168J21
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-020P18
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-239J15
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-064E03
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-092K01
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-198H14
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-072P11
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-308M04
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-132D02
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-145G15
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-338H22
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-028G01
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-087P17
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-004F22
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-037J04
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-291G24
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-266I20
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-209J11
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-287B09
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-151M16
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-073D18
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-170N23
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-278D16
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-113M21
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-211A23
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-103G01
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-159H21
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-337G09
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-067C19
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-306F22
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-292A07
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-200I23
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-265P21
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-202D04
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-059K23
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-292H10
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-227G03
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-267C11
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-244K07
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-181D24
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-085B08
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-125G04
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-013E18
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-227J15
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-049M16
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-290F14
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-061G04
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-177G15
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-292O24
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-081C09
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-234F02
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-200A22
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-310G19
singlet/doublet	doublet
plural/unique	unique

BAC End Information

BAC end	BAC-end 1	BAC-end 2
end name	B6Ng01-287B09.b	B6Ng01-287B09.g
ACC	GA085109	GA085110
length	1,151	894
definition	B6Ng01-287B09.b	B6Ng01-287B09.g
singlet/doublet	---	singlet
BLAST hit	no hit data	unique
sequence	gaattctcacctgaggaataccgaatggtagagaagcacctgaaaaaatg ttcaacatccttaatcatcagggaaatgcaaatcaaaacaaccctgagat tccacctcacaccagtcagaagggctaagatcaaaaattcaggtgacagc agatgctggcgaggatgtggagaaagaggaacactcctccattgttggtg ggatttcaagcttgtacaaccactctggaaatcagtctggcggttcctca gaaaattggacatagtactaccggaagatccagcaatacctcttctgggc atatatccagaagatgccccaaccggtaagaaggacacatgctccactat gttcatagcagccttatttataatagccagaagctggaaagaacccagat gcccctcaacagaggaatggatacagaaaatgtggtacatttacacaatg gagtactactcagctattaaaaagaatgaatttatgaaattcctagccaa atgtatggacctggagggcatcatcctgagtgaggtaacccaatcacaaa ggaactctcacaatatgtactcactgataagtggatattagcccagaaac ttaggatacccaagatataagatacaatttgctaaacacattaaactcaa gagaacaaagaccaaagtgtggacattttgccccttcttagaataggaaa caaaacacccatggaaggagttacagagacaacatttggaagtgtgacga aatgatggaccatctagtgattgccatatccggagatccatcccatgatc agcttccaaacgctgacaccattgcatacactagcaagattttgctgaaa ggacccagatatatctgtctcttgcgagactatgccagggcctagcaaac acagaagtggatgctcacagtcagctattgaatggacacagggccccaat ggagaactagagaaagcacccaagactaaagggactgcaccctatagtgg acacaatatgactaccagtacccgagctcttgtctctagctgcatatgta tcaaagatgcgtagtgcaatcactgcaagagagtcatgattgccacttat atggccagttacaggacgcaaggcaaaagccattgctttgctaaggggga a	gaattcacctatgttgttcatgtcattgtaatttactcatttttatttca gagtcattttccacagcatgagtgccatggtattcaattgtatgattagt tcacatttggttttcgcaaatttctgtgtcaatgttgagtagaatctggg ataagtagtagagagctaaaaagtatcctctgggaagacagaataactga aaaggtgaaggctgcagcacttacaagctgctatggtttgtatatgcttg gcccagggattaacactattagcacgtgtggccttattagagtaagtgta tcactgtgctatggactttaagaccctcggcctaaaaggaaaagaaaaag aaaaagaaaaagaaaaagaaaaagaaaaagaaaaagaaaaggaaaaggaa aaggaaaaggaaaaggaaaaggaaaaagaaaaagaaaaagaaaaagaaaa agaaaaggaaaaggaaaaggaaaaggaaaaggaaaaggaaaaggaaaagg aaaaggaaaaggaaaaggaaaaagaaaaagaaaaagaaaaagaaaaagaa aaagaaaaagaaaaagaaaaggaaaaggaaaaggaaaaggaaaaggaaaa ggaaaaggaaaggaaaaggaaaaagaaaaagaaaaagaaaaagaaaaaga aaaagaaaaagaaaaagaaaaagaaaaagaaaaggaaaaggaaaaggaaa aggaaaaggaaaaagaaaaagaaaagaaaaagaaaagaaaagaaaagaaa agagaagaaaaagaaaaaagaaaagaaaaagaaagagctggcagtggtgg cacatgcctttaatcccagcacttgggaggcagagacaggcggatttctg agttcgaggccagcctgggctatgcagagaaacccttgtcgaaa
quality values	Open. Hide. 58 26 35 38 58 54 58 28 21 47 58 58 58 37 42 62 47 33 42 62 42 62 56 62 62 62 62 54 56 56 56 62 51 56 56 50 56 51 47 56 56 56 47 62 62 62 62 59 59 59 62 62 59 51 62 62 59 62 62 62 62 62 62 62 62 59 59 62 59 59 50 62 59 59 62 62 59 62 62 59 59 62 62 62 62 62 62 62 62 62 62 62 62 62 62 59 59 59 59 62 62 62 59 59 62 62 62 62 62 62 62 62 59 59 62 59 62 59 59 62 62 56 62 62 59 59 62 62 56 59 62 62 62 62 62 62 62 62 62 59 59 62 62 62 59 59 62 62 62 62 62 59 59 62 62 62 62 62 62 62 59 59 62 62 59 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 59 62 62 54 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 54 59 62 62 62 62 62 62 62 62 62 62 59 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 59 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 59 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 59 62 62 62 59 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 59 54 54 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 54 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 54 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 56 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 56 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 52 62 54 62 62 62 62 62 62 62 62 62 62 62 62 62 62 48 54 62 54 62 62 47 62 62 62 62 58 54 58 58 45 58 58 58 58 58 58 54 58 58 58 58 58 58 58 58 58 54 54 58 58 58 54 58 54 58 58 54 52 58 58 58 58 58 58 58 58 58 45 45 58 58 54 58 58 58 54 58 58 58 58 58 54 54 58 58 58 42 58 52 52 54 48 58 54 53 54 58 58 46 54 50 58 58 53 58 58 49 49 58 58 58 58 51 54 42 54 54 48 58 58 58 54 58 58 54 41 58 58 58 58 54 53 49 50 51 58 58 51 47 51 46 47 49 53 58 58 46 41 37 58 58 48 50 53 53 50 30 51 39 20 40 44 51 51 50 49 48 51 42 53 52 52 58 52 46 33 47 41 41 51 49 58 58 54 53 53 50 58 51 49 42 53 50 51 37 43 41 44 52 53 50 36 49 30 58 39 58 50 39 51 58 58 50 49 38 50 32 58 54 52 54 53 58 53 50 35 29 30 46 36 39 54 38 32 54 54 54 50 51 45 52 51 41 35 38 35 40 52 37 47 49 54 37 37 32 54 54 49 52 45 31 54 39 32 42 53 46 45 23 6 42 46 31 45 54 29 39 39 42 54 34 39 40 32 43 52 32 41 54 53 49 28 44 54 32 52 40 37 40 37 28 32 54 54 32 36 53 34 33 53 31 40 18 52 31 45 53 40 37 37 45 42 31 31 32 32 23 32 31 52 31 41 31 52 32 46 31 13 30 29 23 42 26 31 26 51 30 29 34 33 33 33 31 31 28 26 35 31 33 28 27 51 37 31 21 30 30 30 32 25 26 31 29 28 30 31 30 31 25 43 31 28 30 42 32 36 19 33 33 30 22 32 13 46 46 30 22 31 31 26 37 46 25 27 18 31 23 46 32 28 19 38 28 23 25 19 28 31 38 42 34 32 30 30 27 24 28 19 7 31 16 28 17 31 27 31 31 26 26 21 11 31 31 15 25 32 31 21 32 35 44 31 26 13 30 16 22 34 32 19 25 25 25 16 18 33 35 34 33 16 19 24 31 24 38 32 28 33 34 24 13 30 16 20 23 24 21 24 21 31 10 20 9 17 36 17 4 13 31 33 9 21 18 23 25 17 13 34 48 15 22 17 19 29 16 22 33 20 16 23 24 31 36 25 10 10 17 7 4 18 22 30 12 19 34 14 17 10 21 22 15 28 7 27 18 7 13 16 11 31 6 8 15 13 8 24 9 10 9 11 9 24 8 27 10 20 21 5 16 16 24 28 8 15 30 15 27 14 12 19 24 7 18 8 6 5 6 11 16 21 16 13 16 21 19 20 5 17 5 15 21 16 10 16 10 10 23 9 13 23 13 20 6 5 12 11 3 3 3 3 4 8 21 10 7 8 8 21 7 12 7 5 7 4 8 6 2 9 9 16 6 3 2 6 7 9 4 18 7 17 13 4 5 4 18 9 7 25 24 6 6 7 8 7 12 6 15 6 3 2 3 11 4 5 16 17 16 17 22 11 11 5 1 1 2 4 4 2 2 2 6 5 2 2 2 7 8 7 22 22 30 16 14 5	Open. Hide. 62 49 30 37 62 47 26 54 62 62 62 62 62 62 56 47 54 62 44 42 62 62 62 59 62 59 62 62 62 62 62 59 62 59 62 62 62 59 59 62 62 62 62 59 62 59 62 62 49 59 59 62 62 62 62 62 62 62 62 62 62 49 59 62 59 59 62 62 62 62 54 62 62 62 62 59 59 62 62 62 59 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 59 62 62 62 59 62 62 62 62 62 62 62 62 62 62 62 62 62 59 62 62 62 62 62 62 62 62 62 62 62 62 62 62 59 62 62 62 62 62 62 62 62 62 62 59 62 62 62 62 62 62 62 62 59 62 62 62 62 62 62 62 59 54 34 62 59 62 62 62 62 59 59 59 59 59 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 59 62 59 59 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 56 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 56 62 62 56 62 62 62 62 62 56 62 56 56 62 62 56 62 62 62 62 56 56 46 46 56 56 56 56 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 46 62 62 62 62 62 62 62 62 62 52 54 62 54 62 62 62 62 62 62 54 58 52 52 52 54 52 58 48 48 54 58 54 58 52 52 52 52 52 58 54 52 54 54 54 58 54 52 52 45 58 58 58 58 58 58 41 58 52 54 54 54 58 58 54 54 58 46 58 58 54 58 54 45 58 58 54 54 58 54 58 58 58 58 58 41 49 47 58 58 58 58 58 58 58 58 58 58 58 58 49 58 58 54 49 58 50 49 49 51 58 54 48 46 49 51 51 58 50 50 54 58 58 58 54 58 58 51 53 58 51 49 48 41 58 58 50 42 44 49 49 58 50 51 54 58 54 58 51 51 58 51 51 58 51 51 54 54 58 58 49 49 51 54 58 50 54 58 49 41 58 50 51 54 50 51 58 50 58 58 54 51 46 42 44 54 51 49 54 53 54 54 44 49 54 42 44 49 50 50 22 6 5 12 9 54 41 51 54 40 50 54 46 39 47 47 49 51 49 26 44 54 31 51 54 42 52 52 32 46 49 39 45 44 38 46 54 40 45 46 41 44 51 40 47 54 32 41 54 53 45 47 31 40 49 31 32 40 28 35 53 34 52 52 33 27 40 47 42 51 38 40 25 27 32 37 51 49 27 49 47 38 40 40 31 47 40 38 30 46 37 45 46 46 30 44 35 45 45 46 26 51 28 25 40 45 29 38 33 51 42 51 29 34 46 25 40 46 33 18 14 20 40 29 27 46 40 46 46 41 21 6 33 25 33 46 31 43 42 41 46 18 40 33 40 12 4 7 13 31 46 46 46 46 33 28 22 46 41 48 41 35 36 46 39 41 44 44 46 31 31 31 23 32 10 6 6 19 29 31 33 28 48 44 25 29 25 21 28 27 14 30 29 33 31 31 15 32 23 18 17 27 41 38 15 31 31 28 32 27 15 24 37 29 21 27 25 25 43 24 32 25 33 27 25 24 32 13 21 14 18 26 30 17 13 13 32 15 37 18 15 20 27 37 22 26 22 32 22 33 16 24 17 18 27 30 16 22 31 34 40 25 23 31 27 27 31 32 11 9 32 14 17 33 13 16 36 25 30 12 11 11 23 22 33 43 39

Alignment Information

BAC End 1

BAC End 2

seq1: chrX_162575892_162576606
seq2: B6Ng01-287B09.g_66_779

seq1  GAATTCACCTATGTTGTTCATGTCATTGTAATTTACTCATTTTTATTTCA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCACCTATGTTGTTCATGTCATTGTAATTTACTCATTTTTATTTCA  50

seq1  GAGTCATTTTCCACAGCATGAGTGCCATGGTATTCAATTGTATGATTAGT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGTCATTTTCCACAGCATGAGTGCCATGGTATTCAATTGTATGATTAGT  100

seq1  TCACATTTGGTTTTCGCAAATTTCTGTGTCAATGTTGAGTAGAATCTGGG  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCACATTTGGTTTTCGCAAATTTCTGTGTCAATGTTGAGTAGAATCTGGG  150

seq1  ATAAGTAGTAGAGAGCTAAAAAGTATCCTCTGGGAAGACAGAATAACTGA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATAAGTAGTAGAGAGCTAAAAAGTATCCTCTGGGAAGACAGAATAACTGA  200

seq1  AAAGGTGAAGGCTGCAGCACTTACAAGCTGCTATGGTTTGTATATGCTTG  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAGGTGAAGGCTGCAGCACTTACAAGCTGCTATGGTTTGTATATGCTTG  250

seq1  GCCCAGGGATTAACACTATTAGCACGTGTGGCCTTATTAGAGTAAGTGTA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCCCAGGGATTAACACTATTAGCACGTGTGGCCTTATTAGAGTAAGTGTA  300

seq1  TCACTGTGCTATGGACTTTAAGACCCTCGGCCTAAAAGGAAAAGAAAAAG  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCACTGTGCTATGGACTTTAAGACCCTCGGCCTAAAAGGAAAAGAAAAAG  350

seq1  AAAAAGAAAAAGAAAAAGAAAAAGAAAAAGAAAAAGAAAAGGAAAAGGAA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAAAGAAAAAGAAAAAGAAAAAGAAAAAGAAAAAGAAAAGGAAAAGGAA  400

seq1  AAGGAAAAGGAAAAGGAAAAGGAAAAAGAAAAAGAAAAAGAAAAAGAAAA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGGAAAAGGAAAAGGAAAAGGAAAAAGAAAAAGAAAAAGAAAAAGAAAA  450

seq1  AGAAAAGGAAAAGGAAAAGGAAAAGGAAAAGGAAAAGGAAAAGGAAAAGG  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAAAAGGAAAAGGAAAAGGAAAAGGAAAAGGAAAAGGAAAAGGAAAAGG  500

seq1  AAAAGGAAAAGGAAAAGGAAAAAGAAAAAGAAAAAGAAAAAGAAAAAGAA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAAGGAAAAGGAAAAGGAAAAAGAAAAAGAAAAAGAAAAAGAAAAAGAA  550

seq1  AAAGAAAAAGAAAAAGAAAAGGAAAAGGAAAAGGAAAAGGAAAAGGAAAA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAGAAAAAGAAAAAGAAAAGGAAAAGGAAAAGGAAAAGGAAAAGGAAAA  600

seq1  GGAAAAGGAAAAGGAAAAGGAAAAAGAAAAAGAAAAAGAAAAAGAAAAAG  650
      |||||||| |||||||||||||||||||||||||||||||||||||||||
seq2  GGAAAAGG-AAAGGAAAAGGAAAAAGAAAAAGAAAAAGAAAAAGAAAAAG  649

seq1  AAAAAGAAAAAGAAAAAGAAAAAGAAAAAGAAAAGGAAAAGGAAAAGGAA  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAAAGAAAAAGAAAAAGAAAAAGAAAAAGAAAAGGAAAAGGAAAAGGAA  699

seq1  AAGGAAAAGGAAAAA  715
      |||||||||||||||
seq2  AAGGAAAAGGAAAAA  714

BAC Information

Search Parameter

Search Result

BAC

BAC End Information

Alignment Information