MoG+ -Mouse Genome database with high added value-

BAC Information

BAC name
Region	Chromosome -
Gene	search by nearby gene name.
Format	rows / page	Page	1

BAC

Clone Name	B6Ng01-288L19
Chromosome	X (Build37)
Map Location	161,831,504 - 161,832,536
singlet/doublet	singlet
Overlap gene	none
Upstream gene	Figf, Piga, Asb11, Asb9, Mospd2, Fancb, LOC627045, Glra2
Downstream gene	LOC100040753, Gemin8, Gpm6b, Ofd1
Link	Open Mouse BAC browser

Click to get alignment info.

name	Figf (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:14205 MGI:108037
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Piga (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:18700 MGI:99461
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Asb11 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:68854 MGI:1916104
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Asb9 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:69299 MGI:1916549
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Mospd2 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:76763 MGI:1924013
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Fancb (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:237211 MGI:2448558
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	LOC627045 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:627045
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 3 Proteins pseudo : _no_value

name	Glra2 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:237213 MGI:95748
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	LOC100040753 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:100040753
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 mRNA, 4 ESTs

name	Gemin8 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:237221 MGI:2384300
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Gpm6b (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:14758 MGI:107672
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Ofd1 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:237222 MGI:1350328
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Figf (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:6753873 GeneID:14205 MGI:108037
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : c-fos induced growth factor transcript_id : NM_010216.1

name	Piga (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:126273665 GeneID:18700 MGI:99461
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : phosphatidylinositol glycan anchor biosynthesis, class A transcript_id : NM_011081.2

name	Asb11 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:17105325 GeneID:68854 MGI:1916104
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : ankyrin repeat and SOCS box-containing protein 11 transcript_id : NM_026853.1

name	Asb9 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:142373912 GeneID:69299 MGI:1916549
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : ankyrin repeat and SOCS box-containing protein 9 transcript_id : NM_027027.2

name	Mospd2 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:142356338 GeneID:76763 MGI:1924013
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : motile sperm domain containing 2 transcript_id : NM_029730.2

name	Fancb (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:54020736 GeneID:237211 MGI:2448558
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : Fanconi anemia, complementation group B transcript_id : NM_175027.3

name	Glra2 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:142373644 GeneID:237213 MGI:95748
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : glycine receptor, alpha 2 subunit transcript_id : NM_183427.3

name	LOC100040753 (CDS detail)
type	mRNA
link	vega ensembl NCBI
xref	GI:149272509 GeneID:100040753
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 mRNA, 4 ESTs product : similar to pol protein transcript_id : XM_001475185.1

name	Gemin8 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:125628630 GeneID:237221 MGI:2384300
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : gem (nuclear organelle) associated protein 8 transcript_id : NM_146238.3

name	Gpm6b (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:118130376 GeneID:14758 MGI:107672
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : glycoprotein m6b transcript_id : NM_023122.2

name	Ofd1 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:31342288 GeneID:237222 MGI:1350328
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : oral-facial-digital syndrome 1 gene homolog (human) transcript_id : NM_177429.2

name	Figf (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:6753874 CCDS:CCDS30521.1 GeneID:14205 MGI:108037
definition	GO_component : GO:0005576 - extracellular region [Evidence IDA]; GO:0016020 - membrane [Evidence IEA] GO_function : GO:0008083 - growth factor activity [Evidence IDA] [Evidence IEA]; GO:0005515 - protein binding [Evidence IPI]; GO:0005172 - vascular endothelial growth factor receptor binding [Evidence TAS] GO_process : GO:0001525 - angiogenesis [Evidence IEA]; GO:0030154 - cell differentiation [Evidence IEA]; GO:0008283 - cell proliferation [Evidence IDA]; GO:0007275 - development [Evidence IEA]; GO:0000074 - regulation of progression through cell cycle [Evidence IEA] codon_start : 1 product : c-fos induced growth factor protein_id : NP_034346.1

name	Piga (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:126273666 CCDS:CCDS30522.1 GeneID:18700 MGI:99461
definition	EC_number : 2.4.1.198 GO_component : GO:0005789 - endoplasmic reticulum membrane [Evidence ISS]; GO:0000506 - glycosylphosphatidylinositol-N- acetylglucosaminyltransferase (GPI-GnT) complex [Evidence ISS]; GO:0016020 - membrane [Evidence IEA] GO_function : GO:0017176 - phosphatidylinositol N-acetylglucosaminyltransferase activity [Evidence ISS]; GO:0005515 - protein binding [Evidence ISS]; GO:0016740 - transferase activity [Evidence IEA] GO_process : GO:0006506 - GPI anchor biosynthesis [Evidence ISS] [Evidence IEA]; GO:0009893 - positive regulation of metabolism [Evidence ISS] codon_start : 1 note : phosphatidylinositolglycan class A product : phosphatidylinositol glycan, class A protein_id : NP_035211.2

name	Asb11 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:17105326 CCDS:CCDS30523.1 GeneID:68854 MGI:1916104
definition	GO_component : GO:0005575 - cellular_component [Evidence ND] codon_start : 1 product : ankyrin repeat and SOCS box-containing protein 11 protein_id : NP_081129.1

name	Asb9 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:21311897 CCDS:CCDS30524.1 GeneID:69299 MGI:1916549
definition	GO_component : GO:0005575 - cellular_component [Evidence ND] GO_process : GO:0007242 - intracellular signaling cascade [Evidence IEA] codon_start : 1 product : ankyrin repeat and SOCS box-containing protein 9 protein_id : NP_081303.1

name	Mospd2 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:110626072 GeneID:76763 MGI:1924013
definition	GO_component : GO:0016021 - integral to membrane [Evidence IEA]; GO:0016020 - membrane [Evidence IEA] codon_start : 1 product : motile sperm domain containing 2 protein_id : NP_084006.1

name	Fancb (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:54020737 GeneID:237211 MGI:2448558
definition	GO_component : GO:0005634 - nucleus [Evidence IEA] GO_process : GO:0006281 - DNA repair [Evidence IEA]; GO:0006974 - response to DNA damage stimulus [Evidence IEA] codon_start : 1 product : Fanconi anemia, complementation group B protein_id : NP_778192.2

name	Glra2 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:34556195 GeneID:237213 MGI:95748
definition	GO_component : GO:0016021 - integral to membrane [Evidence IEA]; GO:0016020 - membrane [Evidence IEA]; GO:0005624 - membrane fraction [Evidence IEA]; GO:0045211 - postsynaptic membrane [Evidence IEA] GO_function : GO:0005254 - chloride channel activity [Evidence IEA]; GO:0031404 - chloride ion binding [Evidence IEA]; GO:0005230 - extracellular ligand-gated ion channel activity [Evidence IEA]; GO:0004890 - GABA-A receptor activity [Evidence IEA]; GO:0016934 - glycine-gated chloride channel activity [Evidence IEA]; GO:0005216 - ion channel activity [Evidence IEA]; GO:0030594 - neurotransmitter receptor activity [Evidence IEA]; GO:0004872 - receptor activity [Evidence IEA] GO_process : GO:0006821 - chloride transport [Evidence IEA]; GO:0006811 - ion transport [Evidence IEA]; GO:0007268 - synaptic transmission [Evidence IEA]; GO:0006810 - transport [Evidence IEA] codon_start : 1 product : glycine receptor, alpha 2 subunit protein_id : NP_906272.1

name	LOC100040753 (CDS detail)
type	CDS
link	vega ensembl NCBI
xref	GI:149272510 GeneID:100040753
definition	codon_start : 1 product : similar to pol protein protein_id : XP_001475235.1

name	Gemin8 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:31559907 GeneID:237221 MGI:2384300
definition	codon_start : 1 product : gem (nuclear organelle) associated protein 8 protein_id : NP_666350.2

name	Gpm6b (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:12963495 CCDS:CCDS30526.1 GeneID:14758 MGI:107672
definition	GO_component : GO:0016020 - membrane [Evidence IEA] codon_start : 1 product : glycoprotein m6b protein_id : NP_075611.1

name	Ofd1 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:28933461 GeneID:237222 MGI:1350328
definition	GO_component : GO:0005932 - basal body [Evidence ISS]; GO:0005813 - centrosome [Evidence ISS] GO_function : GO:0003674 - molecular_function [Evidence ND] GO_process : GO:0035083 - cilium axoneme biogenesis [Evidence IMP] codon_start : 1 product : oral-facial-digital syndrome 1 gene homolog protein_id : NP_803178.1

name	LOC627045 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:627045
definition	number : 1 pseudo : _no_value

name	LOC627045 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:627045
definition	number : 2 pseudo : _no_value

name	LOC627045 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:627045
definition	number : 3 pseudo : _no_value

name	LOC627045 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:627045
definition	number : 4 pseudo : _no_value

clone name	MSMg01-419A21
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-453E08
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-058O17
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-056M24
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-312P09
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-502M24
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-198G23
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-048E22
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-202J04
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-392O11
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-058G20
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-061I19
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-478L14
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-459N09
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-066M07
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-404K02
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-498P19
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-332F13
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-067C24
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-444P11
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-377G15
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-368J12
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-324M18
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-435K21
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-119M23
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-215K11
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-290G01
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-304L14
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-112A10
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-476L21
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-544E05
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-521L23
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-304M08
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-344F22
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-052F20
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-516D08
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-400I22
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-537C24
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-322O20
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-271A05
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-075L15
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-064E16
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-098D03
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-183F03
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-034H24
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-022A20
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-003B13
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-253M22
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-168C05
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-234F01
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-133L12
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-214M10
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-342N18
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-034L06
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-324C01
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-262B18
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-076N07
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-242P06
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-150L10
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-209K21
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-108N04
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-329N16
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-277O04
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-011E14
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-310K16
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-147I23
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-230C03
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-113I22
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-240G19
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-288L19
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-023G23
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-292J12
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-162N22
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-149M07
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-266N02
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-181M13
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-281K15
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-201O06
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-168J21
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-020P18
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-239J15
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-064E03
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-092K01
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-198H14
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-072P11
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-308M04
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-132D02
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-145G15
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-338H22
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-028G01
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-087P17
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-004F22
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-037J04
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-291G24
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-266I20
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-209J11
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-287B09
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-151M16
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-073D18
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-170N23
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-278D16
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-113M21
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-211A23
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-103G01
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-159H21
singlet/doublet	singlet
plural/unique	unique

BAC End Information

BAC end	BAC-end 1	BAC-end 2
end name	B6Ng01-288L19.b	B6Ng01-288L19.g
ACC	GA086324	GA086325
length	1,206	1,032
definition	B6Ng01-288L19.b	B6Ng01-288L19.g
singlet/doublet	---	singlet
BLAST hit	no hit data	unique
sequence	gaattctttgttcagttctgagccccattttttaagggggttatttgatt ttctgaggtccaccttcttgagttctttatatatgttggatattagtccc ctatctgatttaggataggtaaagatcctttcccagtctgttggtggtct ttttgtcttatagacagtgtcttttgccttgcagaaactttggagtttca ttaggtcccatttgtcaattctcgatcttacagcacaagccattgctgtt ctgttcaggaatttttcccctgtgcccatatcttcaaggcttttccccac tttctcctctataagtttcagtgtctctggttttatgtgaagttccttga tccacttagatttgaccttagtacaaggagaaaagtatggatcgattcgc attcttctacatgataacaaccagttgtgccagcaccaattgttgaaaat gctgtctttcttccactggatggttttggctcccttgtcgaagatcaagt gaccataggtgtgtgggttcatttctgggtcttcaattctattccattgg tccacttgtctgtctctataccagtaccatgcagtttttatcacaattgc tctgtagtaaagctttaggtcaggcatggtgattccaccagaggttcttt tatccttgagaagagtttttgctatcctcggttttttgttattccagatg aatttgcaaattgctccttctaattcgttgaagaattgagttggaatttt aatggggattgcattgaatctgtagattgcttttggcaagatagccattt ttacaatgttggtcctgccaatccatgagcatgggagatctttccatctt ctgagatcttctttaatttctttcttcagggacttgaagtttttatcata cagatctttcacttccttcgttagagtcacgccgagatatttttatatta tttgtggctattgagaagggtgttgtttccctaatttcttctcagcctgt ttattctttgtgtagagaaaggccatttgacttgtttgagttaattttta ttatccagctactttcaaccgaagcctgtttatcagtttaggagtttctt cttgttggaattttttaaggttcaacttaatattatacctatcatatcat ctggctaacattgcgacggtcttggacttcccttcttgtttttcgcacaa gatatg	gaattctccgcttattactttgtattactgtgtataccttcatgaaaatt tatgtacaaaaattttatttcattctacatgtttttgatagtagataaat aaaattgtattgtatgtatcctttggtgagaatatttgtataaagcaata tcaaaaattatttcattactcatgcagtattaaattgatgtgttatttat tctctgattccctgtggcaccctttttatacatgagaactatttcaggct ctctcttttcatttaccatttgtctatatttcatattttaatgcatcctt cctatcatgtatgtgaacacaattccagtcccttttttatattctatcaa tatgcataataatgatataataacagtatcttcatcattatactgttaaa agaaaatagccacacacaaaattgtagctaatgtatcctgtttttttaca aaatgccaaaaatataatactctgctcttaaccaatcacccaaggagaaa gcaggagatgcagtcagaggagtgcagggaaaacccataaatgatatgga agacactaaaaggctttcagtagaggagtaatatggcctgatttgtgtct ttaaagtacaattcttaaacctcattgaccagacacctttatgattcaag aaaagtggtaatgagactagttatgaggccaaaaaaaaatccaaagagga gattatggaaggagactacggtgacagatatagagatggttgcatgatgt gagattccaagtatgctatgaagagaaagatattttctgatgaatctgtt gtgcaataaagaagaagagtattaaaagaagaggactttggagctgcaat tatccctcagtggtagagaggatgcctaagatagaagcatcactgagttt tattcctaaagtagcacacagaaaaggaaaacttttaaatttgagcttgg acttgttccagaccattgtaatcccaacactttgggtggctgagacaaaa gatttcaaatttaagtgactcaatctcacaaa
quality values	Open. 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Hide. 62 38 37 47 62 62 62 62 62 62 62 62 29 26 25 21 21 21 28 46 56 49 44 56 62 59 59 59 62 62 62 62 59 62 62 62 62 62 62 62 59 59 62 59 59 62 62 62 62 62 59 59 54 62 62 59 62 59 62 51 56 56 42 49 43 33 62 62 62 62 54 59 62 62 62 59 62 62 59 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 54 54 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 56 62 62 62 62 59 59 62 54 54 62 62 62 62 62 62 62 59 62 62 62 62 62 62 62 62 62 62 59 59 62 62 62 62 62 54 62 62 62 62 59 59 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 54 54 62 62 59 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 54 54 54 62 62 62 62 62 62 62 59 59 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 59 62 62 62 62 62 62 62 62 62 62 62 59 62 56 38 49 62 62 62 59 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 59 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 49 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 56 62 62 56 62 56 62 56 62 62 62 62 62 62 62 62 62 62 46 62 54 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 56 62 56 62 62 62 62 62 62 47 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 49 62 62 62 62 62 62 62 47 62 62 62 58 46 58 58 58 58 58 58 58 58 58 49 58 58 52 58 58 58 58 58 58 58 58 58 58 58 54 58 58 58 58 58 58 58 54 58 58 54 54 58 58 58 58 58 54 58 50 48 39 58 54 58 58 58 58 58 52 58 58 58 54 52 52 58 54 50 58 49 58 58 52 54 42 49 51 52 47 58 46 47 58 58 58 58 43 58 58 53 58 58 51 58 58 58 51 40 58 54 50 51 46 52 48 40 42 58 58 58 58 50 58 53 53 58 58 51 53 58 58 58 46 40 48 47 50 58 40 31 39 58 58 58 51 50 51 49 46 24 48 46 50 50 51 58 58 58 58 29 50 58 34 26 51 50 33 58 58 52 47 41 53 52 52 51 53 39 39 49 54 40 51 32 58 32 58 58 58 58 58 58 58 32 39 52 52 40 58 49 52 58 31 49 54 32 25 25 40 49 39 54 54 53 52 32 54 51 37 40 39 53 37 53 25 51 21 38 32 42 23 47 41 32 37 41 53 42 51 35 31 31 54 52 31 35 52 40 28 45 53 41 33 42 45 44 51 40 41 25 42 45 41 20 33 45 42 37 42 52 45 41 39 32 36 54 37 40 53 39 45 53 45 40 45 28 32 47 52 47 47 52 34 34 47 32 31 52 32 37 45 32 33 31 45 52 34 41 29 20 24 35 31 51 46 31 51 26 20 46 41 31 51 23 31 34 31 32 31 46 46 32 28 32 38 18 46 14 29 27 23 30 51 31 42 24 45 23 31 31 31 21 25 17 31 31 28 31 31 46 31 22 30 31 31 37 46 31 29 38 34 43 32 43 15 27 19 21 31 30 35 30 29 31 24 34 21 26 28 32 32 20 34 18 27 31 26 31 32 34 36 24 36 46 44 27 13 18 38 33 41 25 24 41 18 32 31 26 24 32 29 33 26 31 31 14 33 44 44 15 5 17 32 48 44 31 34 36 44 48 10 6 37 14 5 12 8 12 31 24 37 18 24 18 31 21 17 17 19 31 21 30 16 32 21 15 37 20 23 31 31 11 12 9 14 25 22 25 37 29 7 24 15 20 21 11 31 18 32 48 33 9 12 33 27 17 20 17 7 20 23 21 34 39 26 23 29 24 36 33 13 13 40 12 27 28 17 13 19 24 5 14 19 9 18 22 11 13 28 28 26 14 3 4 7 47 30

Alignment Information

BAC End 1

BAC End 2

seq1: chrX_161831504_161832536
seq2: B6Ng01-288L19.g_69_1100

seq1  GAATTCTCCGCTTATTACTTTGTATTACTGTGTATACCTTCATGAAAATT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTCCGCTTATTACTTTGTATTACTGTGTATACCTTCATGAAAATT  50

seq1  TATGTACAAAAATTTTATTTCATTCTACATGTTTTTGATAGTAGATAAAT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATGTACAAAAATTTTATTTCATTCTACATGTTTTTGATAGTAGATAAAT  100

seq1  AAAATTGTATTGTATGTATCCTTTGGTGAGAATATTTGTATAAAGCAATA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAATTGTATTGTATGTATCCTTTGGTGAGAATATTTGTATAAAGCAATA  150

seq1  TCAAAAATTATTTCATTACTCATGCAGTATTAAATTGATGTGTTATTTAT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCAAAAATTATTTCATTACTCATGCAGTATTAAATTGATGTGTTATTTAT  200

seq1  TCTCTGATTCCCTGTGGCACCCTTTTTATACATGAGAACTATTTCAGGCT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTCTGATTCCCTGTGGCACCCTTTTTATACATGAGAACTATTTCAGGCT  250

seq1  CTCTCTTTTCATTTACCATTTGTCTATATTTCATATTTTAATGCATCCTT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCTCTTTTCATTTACCATTTGTCTATATTTCATATTTTAATGCATCCTT  300

seq1  CCTATCATGTATGTGAACACAATTCCAGTCCCTTTTTTATATTCTATCAA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTATCATGTATGTGAACACAATTCCAGTCCCTTTTTTATATTCTATCAA  350

seq1  TATGCATAATAATGATATAATAACAGTATCTTCATCATTATACTGTTAAA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATGCATAATAATGATATAATAACAGTATCTTCATCATTATACTGTTAAA  400

seq1  AGAAAATAGCCACACACAAAATTGTAGCTAATGTATCCTGTTTTTTTACA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAAAATAGCCACACACAAAATTGTAGCTAATGTATCCTGTTTTTTTACA  450

seq1  AAATGCCAAAAATATAATACTCTGCTCTTAACCAATCACCCAAGGAGAAA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAATGCCAAAAATATAATACTCTGCTCTTAACCAATCACCCAAGGAGAAA  500

seq1  GCAGGAGATGCAGTCAGAGGAGTGCAGGGAAAACCCATAAATGATATGGA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCAGGAGATGCAGTCAGAGGAGTGCAGGGAAAACCCATAAATGATATGGA  550

seq1  AGACACTAAAAGGCTTTCAGTAGAGGAGTAATATGGCCTGATTTGTGTCT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGACACTAAAAGGCTTTCAGTAGAGGAGTAATATGGCCTGATTTGTGTCT  600

seq1  TTAAAGTACAATTCTTAAACCTCATTGACCAGACACCTTTATGATTCAAG  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAAAGTACAATTCTTAAACCTCATTGACCAGACACCTTTATGATTCAAG  650

seq1  AAAAGTGGTAATGAGACTAGTTATGAGGCCAAAAAAAAATCCAAAGAGGA  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAAGTGGTAATGAGACTAGTTATGAGGCCAAAAAAAAATCCAAAGAGGA  700

seq1  GATTATGGAAGGAGACTACGGTGACAGATATAGAGATGGTTGCATGATGT  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATTATGGAAGGAGACTACGGTGACAGATATAGAGATGGTTGCATGATGT  750

seq1  GAGATTCCAAGTATGCTATGAAGAGAAAGATATTTTCTGATGAATCTGTT  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGATTCCAAGTATGCTATGAAGAGAAAGATATTTTCTGATGAATCTGTT  800

seq1  GTGCAATAAAGAAGAAGAGTATTAAAAGAAGAGGACTTTGGAGCTGCAAT  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGCAATAAAGAAGAAGAGTATTAAAAGAAGAGGACTTTGGAGCTGCAAT  850

seq1  TATCCCTCAGTGGTAGAGAGGATGCCTAAGATAGAAGCATCACTGAGTTT  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATCCCTCAGTGGTAGAGAGGATGCCTAAGATAGAAGCATCACTGAGTTT  900

seq1  TATTCCTAAAGTAGCACACAGAAAAGGAAAACTTTTAAAATTTGAGCTTG  950
      |||||||||||||||||||||||||||||||||||| |||||||||||||
seq2  TATTCCTAAAGTAGCACACAGAAAAGGAAAACTTTT-AAATTTGAGCTTG  949

seq1  GACTTGTTCCAGACCATTGTAATCCCAACAC-TTGGGTGGCTGAGACAAA  999
      ||||||||||||||||||||||||||||||| ||||||||||||||||||
seq2  GACTTGTTCCAGACCATTGTAATCCCAACACTTTGGGTGGCTGAGACAAA  999

seq1  AGATTTCAAATTTAAGGTGACTCAATCTCACAAA  1033
      ||||||||||||||| ||||||||||||||||||
seq2  AGATTTCAAATTTAA-GTGACTCAATCTCACAAA  1032

BAC Information

Search Parameter

Search Result

BAC

BAC End Information

Alignment Information