BAC Information

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BAC

Clone NameB6Ng01-289F16
ChromosomeX (Build37)
Map Location 89,762,244 - 89,762,870
singlet/doubletsinglet
Overlap geneMageb18
Upstream geneEG667993, EG385489, 1700084M14Rik, EG236891, LOC629542, Mageb5, LOC673766, LOC633484, LOC674396, EG278087, Mageb1, EG236892, EG236893, EG436259, EG668061, EG546347
Downstream geneLOC629568, LOC100042663, Rp23-438h3.2, Arx, Pola1
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-289F16.bB6Ng01-289F16.g
ACCGA086781GA086782
length614959
definitionB6Ng01-289F16.b B6Ng01-289F16.g
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattctttgttgagctctgagacccggtttttgatggggttatttgatt
ttctggagtccaccctcttgagttctttatatatattggatattagtccc
ctgtctgatttaagataggtaaagatcctttcccaatctgttggtggcct
ttttgtcttattgacagtgtcttttgctttgcagaagctttgcagtttca
ttaggtcccatttgtcaatcctcgatcttacagcacaagccattgctgtt
ctattcaggaatttttcccctgtacccatatctttgaggcttttccccac
tttctcctctataagattcagtgtctcaggtttgatgtgaagttcctgga
tccacttagatttgaccttattataaggagataggaatggatcaattcaa
attcttctacatgataacaaccagttgtgccagcaccatttgttgaaaag
gctgtctttcttccaatggatgggtttagctcccttgtcaaagatcaagt
gaccataggtgtgtggattcatttctgggtcttcaattctattccattgg
tctaattgtcagtcagtataccagtaccatgcagtttttatcacaattgc
tctgtagtaaagct
gaattccaatgatgggaaataattattataatcattgtttggcttattta
gtacaattgtaggaggtaagggtattattcccattttatacatagtaaaa
ttaaggcttaaccatgtaataccgccttattagttaatagtggatatgga
atacaaaatcacacaaatctggattcaaaatatagagtctcaagaaatac
actatactaagagttccaagaaggaattagacgtctcaagacttggaagg
tatttctagtaaagagataggacttcataaaagctgacagaagaaatacg
atgcatttgagtgaggagaagtaatccctggtggcaagagtccaaacttt
taatcccaacacacagaagttagaggccagaaaatgacaagtttaaggcc
aatctgagccacctagcaaattcaaggctagcctgccccaaaatgaagaa
acaaaaatgaagaaaaagaaaaaaaatacagaaagtgaagaagaaaacaa
tggacatttcaaagactttttaaaaattgacttataggcccttggtcctg
tgaaggttctatgtcccagtgtaggggaatgccaggacagggaagaggga
gtggatgggttggtgagcagggggaggatgaacagcaacatggaagtgca
agctgaataaaccctttccttgccaacttggttcttggtcatgatgtttg
tgtaggaatagaaaccctaagacatgcattatgaaatgatcttgaaccta
aaagggatccaagtggaatattataatgagtatgtaaaaatgtttcccct
cagactcacatattgcaacactttgaaactaattgggtgggctctgtttt
tgggatatatggaatattttagaagttgggactctatcttgttggtattt
ctgtagagggaaatgttgggtgcctattagccccagcccatacttgtggt
ccagagatg
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chrX_89762244_89762870
seq2: B6Ng01-289F16.g_66_692

seq1  GAATTCCAATGATGGGAAATAATTATTATAATCATTGTTTGGCTTATTTA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCCAATGATGGGAAATAATTATTATAATCATTGTTTGGCTTATTTA  50

seq1  GTACAATTGTAGGAGGTAAGGGTATTATTCCCATTTTATACATAGTAAAA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTACAATTGTAGGAGGTAAGGGTATTATTCCCATTTTATACATAGTAAAA  100

seq1  TTAAGGCTTAACCATGTAATACCGCCTTATTAGTTAATAGTGGATATGGA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAAGGCTTAACCATGTAATACCGCCTTATTAGTTAATAGTGGATATGGA  150

seq1  ATACAAAATCACACAAATCTGGATTCAAAATATAGAGTCTCAAGAAGTAC  200
      |||||||||||||||||||||||||||||||||||||||||||||| |||
seq2  ATACAAAATCACACAAATCTGGATTCAAAATATAGAGTCTCAAGAAATAC  200

seq1  ACTATACTAAGAGTTCCAAGAAGGAATTAGACGTCTCAGGACTTGGAAGG  250
      |||||||||||||||||||||||||||||||||||||| |||||||||||
seq2  ACTATACTAAGAGTTCCAAGAAGGAATTAGACGTCTCAAGACTTGGAAGG  250

seq1  TATTTCTAGTAAAGAGATAGGACTTCATAAAAGCTGACAGAAGAAATACG  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATTTCTAGTAAAGAGATAGGACTTCATAAAAGCTGACAGAAGAAATACG  300

seq1  ATGCATTTGAGTGAGGAGAAGTAATCCCTGGTGGCAAGAGTCCAAACTTT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGCATTTGAGTGAGGAGAAGTAATCCCTGGTGGCAAGAGTCCAAACTTT  350

seq1  TAATCCCAACACACAGAAGTTAGAGGCCAGAAAATGACAAGTTTAAGGCC  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAATCCCAACACACAGAAGTTAGAGGCCAGAAAATGACAAGTTTAAGGCC  400

seq1  AATCTGAGCCACCTAGCAAATTCAAGGCTAGCCTGCCCCAAAATGAAGAA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATCTGAGCCACCTAGCAAATTCAAGGCTAGCCTGCCCCAAAATGAAGAA  450

seq1  ACAAAAATGAAGAAAAAGAAAAAAAATACAAAAAGTGAAGAAGAAAACAA  500
      |||||||||||||||||||||||||||||| |||||||||||||||||||
seq2  ACAAAAATGAAGAAAAAGAAAAAAAATACAGAAAGTGAAGAAGAAAACAA  500

seq1  TGGACATTTCAAAGACTTTTTAAAAATTGACTTATAGGCCCTTGGTCCTG  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGACATTTCAAAGACTTTTTAAAAATTGACTTATAGGCCCTTGGTCCTG  550

seq1  TGAAGGTTCTATGTCCCAGTGTAGGGGAATGCCAGGACAGGGAAGAGGGA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAAGGTTCTATGTCCCAGTGTAGGGGAATGCCAGGACAGGGAAGAGGGA  600

seq1  GTGGATGGGTTGGTGAGCAGGGGGAGG  627
      |||||||||||||||||||||||||||
seq2  GTGGATGGGTTGGTGAGCAGGGGGAGG  627