BAC Information

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BAC

Clone NameB6Ng01-291G19
ChromosomeX (Build37)
Map Location 126,906,523 - 127,034,284
singlet/doubletdoublet
Overlap geneLOC100040092
Upstream geneLOC100040570, LOC669120, Diap2
Downstream geneLOC665773, LOC665799, LOC670449
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-291G19.bB6Ng01-291G19.g
ACCGA088311GA088312
length1,0711,126
definitionB6Ng01-291G19.b B6Ng01-291G19.g
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(126,906,523 - 126,907,598)(127,033,143 - 127,034,284)
sequence
gaattcattttcttaaacactaggtgaaagtcaagcatgtccttgggttt
tttttggggggggggaatggtggtcttccactgttccatgctcatgggac
aaaagcaccagttatcaggaaggaaagtttgtttgtgctcaattcactgg
cagacctcttaatcacagctgccaattggattgtgtgccctgtcattcca
cttaagtacctaaacagacccagtgacacagggctgtcagaacataaatg
ttaatcagaacctttttgtcttttgaatgaaatgtacttatttaggttaa
actgtaactcaatctcttcatttagtttagttccctttgcttttgttctt
cacttctcctttctgacttctcttacttccctatcttgctgcctctattt
acacctacaaagtagtgtttggcctcattgagcagaccgaacctacctta
tacatgtgaagccattatgaaaatatcaatattctaacatcacaccatgt
cacattacaatttctcaacttctggttagtttctcaactacaatgagctg
gccagctttatgaatttaaaaccaaacaatattttgtaaaaagtgtgtgt
gtgtgagagagagagacagagacagagagagacagagagagagacagaga
tgcataaagaaacttcaaatgtatgatttgctttaaagtgactcatttga
aattaatatgaagagaaaagtgttagctatgtcattataatgtgtgacag
tatttctcaacatctcacacacacacacacacacacacacacacacacac
aaagtcagtatagaattacctagactctacccaagaaagactgcaaaatt
tgcaggataatgcaaaagacctttatattttaacagtatcttacctcttg
catctatacaccactgaatttggagtactagaaatacatgggttaagagc
aataattaactacccaaatgagatctgattcattttcatattgctagttt
ttgggaattatatcatccactgaaccttaaacatggactgtgcgctgcca
gtaaacgtatataaaaatgct
gaattcactatgcagaccaaggtggcctaggactcacagtgagctgcttg
cacctgcttcctaagtcctgggattaaaggtgtgtcccaccttgcctggc
tcttgcattcagaacaaatagaacgatcatttccactgcatcaagggata
aggaaatatggtcaagtcctttaatgtttttgtttgtttgtttgtttgtc
cattgacctacatgaagtatctgactaatatgagcactctatctccatac
aaagtctttctgtgtagcccatcctggtgtcaagttcatgtcctcctgcc
tcccaagagttgagattataggtataaactaccatgcttagattatgagg
cctttctaagaggaattgcctgataccttttcccagacaaagtgaatcct
ctcctgctgctttctttctaaactacaaatggaaaagagaaaaaaaaaaa
ggagagagtgaaagaaaaaaaggcccccaggctgcaaaatggatgccaaa
tggtaaagatagagaagagaaatccaagttggcacctgcgtgtttctaac
tgagaaacatctttccctgtatctgaacatatttgattttggagcaacaa
agttctagagaattccaaatggcatattaagcatgtataatgccatattg
tcttctgtacctttatagaagcacactgagctgtgttcctgtgagtgttc
acacatgtggttattcgaatgtatgatgcaaaaggaagaggaaaaagaaa
cagaaggggaaggaccttgaggtgatattaagcaccgtgaagcaaaattg
atctcgttctgcagtgtttcttccaggaagctggtgtgctccacagcatc
gcccaagcagaagccaaatcacctacacttaatggttgtgcacatcagct
gcaaagggctttccagaagtttcataaaaacaagaagatgaatttcaggt
aataacaagaaatgaaatgggagaaaataaatgttatagttctaggagag
ttggatcaagttcagaacaaaggctacttacttctcatatctataggatc
ccaccctaatataatatgttaatgatttatctgcttacattacaatggat
catatttcctctgaaatagtatggta
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chrX_126906523_126907598
seq2: B6Ng01-291G19.b_42_1112

seq1  GAATTCATTTTCTTAAACACTAGGTGAAAGTCAAGCATGTCCTTGGGTTT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCATTTTCTTAAACACTAGGTGAAAGTCAAGCATGTCCTTGGGTTT  50

seq1  TTTTTGGGGGGGGGGAATGGTGGTCTTCCACTGTTCCATGCTCATGGGAC  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTTGGGGGGGGGGAATGGTGGTCTTCCACTGTTCCATGCTCATGGGAC  100

seq1  AAAAGCACCAGTTATCAGGAAGGAAAGTTTGTTTGTGCTCAATTCACTGG  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAAGCACCAGTTATCAGGAAGGAAAGTTTGTTTGTGCTCAATTCACTGG  150

seq1  CAGACCTCTTAATCACAGCTGCCAATTGGATTGTGTGCCCTGTCATTCCA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGACCTCTTAATCACAGCTGCCAATTGGATTGTGTGCCCTGTCATTCCA  200

seq1  CTTAAGTACCTAAACAGACCCAGTGACACAGGGCTGTCAGAACATAAATG  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTAAGTACCTAAACAGACCCAGTGACACAGGGCTGTCAGAACATAAATG  250

seq1  TTAATCAGAACCTTTTTGTCTTTTGAATGAAATGTACTTATTTAGGTTAA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAATCAGAACCTTTTTGTCTTTTGAATGAAATGTACTTATTTAGGTTAA  300

seq1  ACTGTAACTCAATCTCTTCATTTAGTTTAGTTCCCTTTGCTTTTGTTCTT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTGTAACTCAATCTCTTCATTTAGTTTAGTTCCCTTTGCTTTTGTTCTT  350

seq1  CACTTCTCCTTTCTGACTTCTCTTACTTCCCTATCTTGCTGCCTCTATTT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACTTCTCCTTTCTGACTTCTCTTACTTCCCTATCTTGCTGCCTCTATTT  400

seq1  ACACCTACAAAGTAGTGTTTGGCCTCATTGAGCAGACCGAACCTACCTTA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACACCTACAAAGTAGTGTTTGGCCTCATTGAGCAGACCGAACCTACCTTA  450

seq1  TACATGTGAAGCCATTATGAAAATATCAATATTCTAACATCACACCATGT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACATGTGAAGCCATTATGAAAATATCAATATTCTAACATCACACCATGT  500

seq1  CACATTACAATTTCTCAACTTCTGGTTAGTTTCTCAACTACAATGAGCTG  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACATTACAATTTCTCAACTTCTGGTTAGTTTCTCAACTACAATGAGCTG  550

seq1  GCCAGCTTTATGAATTTAAAACCAAACAATATTTTGTAAAAAGTGTGTGT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCCAGCTTTATGAATTTAAAACCAAACAATATTTTGTAAAAAGTGTGTGT  600

seq1  GTGTGAGAGAGAGAGACAGAGACAGAGAGAGACAGAGAGAGAGACAGAGA  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGTGAGAGAGAGAGACAGAGACAGAGAGAGACAGAGAGAGAGACAGAGA  650

seq1  TGCATAAAG-AACTTCAAATGTATGATTTGCTTTAAAGTGACTCATTTGA  699
      ||||||||| ||||||||||||||||||||||||||||||||||||||||
seq2  TGCATAAAGAAACTTCAAATGTATGATTTGCTTTAAAGTGACTCATTTGA  700

seq1  AATTAATATGAAGAGAAAAGTGTTAGCTATGTCATTATAATGTGTGACAG  749
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATTAATATGAAGAGAAAAGTGTTAGCTATGTCATTATAATGTGTGACAG  750

seq1  TATTTCTCAACATCTCACACACACACACACACACACACACACACACACAC  799
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATTTCTCAACATCTCACACACACACACACACACACACACACACACACAC  800

seq1  AAAGTCAGTATAAGAATTACCTAGACTCTACCCAAGAAAGAACTGC-AAA  848
      ||||||||||| |||||||||||||||||||||||||||| ||||| |||
seq2  AAAGTCAGTAT-AGAATTACCTAGACTCTACCCAAGAAAG-ACTGCAAAA  848

seq1  TTTGCAGGATAATGCAAAAAGAACTTTATATTTTAACAAGTATCTTAGCT  898
      ||||||||||||||| |||||| |||||||||||||| ||||||||| ||
seq2  TTTGCAGGATAATGC-AAAAGACCTTTATATTTTAAC-AGTATCTTACCT  896

seq1  CTTGCATCTATATACCACTGAATTTTGAAGTACTAGAAATACATTGGTTA  948
      |||||||||||| ||||||||| |||| |||||||||||||||| |||| 
seq2  CTTGCATCTATACACCACTGAA-TTTGGAGTACTAGAAATACATGGGTT-  944

seq1  AAGAGCAATAATTAACTACCCAAATGAGATTCTGATTCATTTTTCAATAT  998
      ||||||||||||||||||||||||||||| |||||||||||||   ||||
seq2  AAGAGCAATAATTAACTACCCAAATGAGA-TCTGATTCATTTT--CATAT  991

seq1  TGCTAGTTTTTGGAATTTATATCATCCACTGACACTTAAACAT-GACT-T  1046
      ||||||||||||| | ||||||||||||||||  ||||||||| |||| |
seq2  TGCTAGTTTTTGGGAATTATATCATCCACTGAACCTTAAACATGGACTGT  1041

seq1  GCTCATGCAGTAAACGTATATAAGAATGCT  1076
      || |   |||||||||||||||| ||||||
seq2  GCGCTGCCAGTAAACGTATATAAAAATGCT  1071

seq1: chrX_127033143_127034284
seq2: B6Ng01-291G19.g_67_1192 (reverse)

seq1  TACCAATTACTATTTTCAGGGGAAATATTGATTCCCATTGTAAATGTAGG  50
      |||||  ||||| |||||| ||||||| ||||  ||||||| |||||| |
seq2  TACCA--TACTA-TTTCAGAGGAAATA-TGAT--CCATTGT-AATGTAAG  43

seq1  CAGATAAATCATTAACATATTTAATAATTAAGGGTGGGATCCTAATAAGA  100
      |||||||||||||||||||||  |||  | ||||||||||||||   |||
seq2  CAGATAAATCATTAACATATT--ATA--TTAGGGTGGGATCCTA--TAGA  87

seq1  TATTGAGAAGTAAGGTAGCCTTTGTTCTGAACTTGATCCAACTCT-CTAG  149
      || |||||||||| ||||||||||||||||||||||||||||||| ||||
seq2  TA-TGAGAAGTAA-GTAGCCTTTGTTCTGAACTTGATCCAACTCTCCTAG  135

seq1  AACTATAACATTTATTTTCTTCCCATTTCATTTTCTTGTTATTACCTG-A  198
      ||||||||||||||||||| |||||||||| ||||||||||||||||| |
seq2  AACTATAACATTTATTTTC-TCCCATTTCA-TTTCTTGTTATTACCTGAA  183

seq1  ATTCATCTTCTTGTTTTTATGAAACTTCTGGAAAGCCCTTTGCAGCTGAT  248
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTCATCTTCTTGTTTTTATGAAACTTCTGGAAAGCCCTTTGCAGCTGAT  233

seq1  GTGCACAACCATTAAGTGTAGGTGATTTGGCTTCTGCTTTGGGCGATGCT  298
      ||||||||||||||||||||||||||||||||||||| ||||||||||||
seq2  GTGCACAACCATTAAGTGTAGGTGATTTGGCTTCTGC-TTGGGCGATGCT  282

seq1  GTGGAGCACACCAGCTTCCTGGAAGAAACACTGCAGAACGAGATCAATTT  348
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGGAGCACACCAGCTTCCTGGAAGAAACACTGCAGAACGAGATCAATTT  332

seq1  TGCTTCACGGTGCTTAATATCACCTCAAGGTCCTTCCCCTTCTGTTTCTT  398
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCTTCACGGTGCTTAATATCACCTCAAGGTCCTTCCCCTTCTGTTTCTT  382

seq1  TTTCCTCTTCCTTTTGCATCATACATTCGAATAACCACATGTGTGAACAC  448
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTCCTCTTCCTTTTGCATCATACATTCGAATAACCACATGTGTGAACAC  432

seq1  TCACAGGAACACAGCTCAGTGTGCTTCTATAAAGGTACAGAAGACAATAT  498
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCACAGGAACACAGCTCAGTGTGCTTCTATAAAGGTACAGAAGACAATAT  482

seq1  GGCATTATACATGCTTAATATGCCATTTGGAATTCTCTAGAACTTTGTTG  548
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGCATTATACATGCTTAATATGCCATTTGGAATTCTCTAGAACTTTGTTG  532

seq1  CTCCAAAATCAAATATGTTCAGATACAGGGAAAGATGTTTCTCAGTTAGA  598
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCCAAAATCAAATATGTTCAGATACAGGGAAAGATGTTTCTCAGTTAGA  582

seq1  AACACGCAGGTGCCAACTTGGATTTCTCTTCTCTATCTTTACCATTTGGC  648
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACACGCAGGTGCCAACTTGGATTTCTCTTCTCTATCTTTACCATTTGGC  632

seq1  ATCCATTTTGCAGCCTGGGGGCCTTTTTTTCTTTCACTCTCTCCTTTTTT  698
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCCATTTTGCAGCCTGGGGGCCTTTTTTTCTTTCACTCTCTCCTTTTTT  682

seq1  TTTTTCTCTTTTCCATTTGTAGTTTAGAAAGAAAGCAGCAGGAGAGGATT  748
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTTCTCTTTTCCATTTGTAGTTTAGAAAGAAAGCAGCAGGAGAGGATT  732

seq1  CACTTTGTCTGGGAAAAGGTATCAGGCAATTCCTCTTAGAAAGGCCTCAT  798
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACTTTGTCTGGGAAAAGGTATCAGGCAATTCCTCTTAGAAAGGCCTCAT  782

seq1  AATCTAAGCATGGTAGTTTATACCTATAATCTCAACTCTTGGGAGGCAGG  848
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATCTAAGCATGGTAGTTTATACCTATAATCTCAACTCTTGGGAGGCAGG  832

seq1  AGGACATGAACTTGACACCAGGATGGGCTACACAGAAAGACTTTGTATGG  898
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGACATGAACTTGACACCAGGATGGGCTACACAGAAAGACTTTGTATGG  882

seq1  AGATAGAGTGCTCATATTAGTCAGATACTTCATGTAGGTCAATGGACAAA  948
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGATAGAGTGCTCATATTAGTCAGATACTTCATGTAGGTCAATGGACAAA  932

seq1  CAAACAAACAAACAAAAACATTAAAGGACTTGACCATATTTCCTTATCCC  998
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAACAAACAAACAAAAACATTAAAGGACTTGACCATATTTCCTTATCCC  982

seq1  TTGATGCAGTGGAAATGATCGTTCTATTTGTTCTGAATGCAAGAGCCAGG  1048
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGATGCAGTGGAAATGATCGTTCTATTTGTTCTGAATGCAAGAGCCAGG  1032

seq1  CAAGGTGGGACACACCTTTAATCCCAGGACTTAGGAAGCAGGTGCAAGCA  1098
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAGGTGGGACACACCTTTAATCCCAGGACTTAGGAAGCAGGTGCAAGCA  1082

seq1  GCTCACTGTGAGTCCTAGGCCACCTTGGTCTGCATAGTGAATTC  1142
      ||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTCACTGTGAGTCCTAGGCCACCTTGGTCTGCATAGTGAATTC  1126