BAC Information

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BAC

Clone NameB6Ng01-292I14
ChromosomeX (Build37)
Map Location 110,566,590 - 110,567,711
singlet/doubletsinglet
Overlap geneDach2
Upstream geneEG623341, 2010106E10Rik, Zfp711, Pof1b, LOC623412, EG623428, LOC100039112, Chm, EG664918
Downstream geneLOC237016, EG664945, EG634881, LOC100039201
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-292I14.bB6Ng01-292I14.g
ACCGA089151GA089152
length1,122860
definitionB6Ng01-292I14.b B6Ng01-292I14.g
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattcttaggaaggtacactcacttttgcagggcaacacaggttaataa
gtgtgctatagcaatattagaagataacctcagctattctatcaggcatg
ggaatatgtttgtatgattaacagttcttaagtgcttgaaattccttcct
gtctgataagaaatttaaaaaaacatttaattgacaagatatatctgaaa
tttcctaaaacaggtatgacagtttcatttaagttgaaatgatctgtagc
atgttggagtctcccatgttttagggtttattgtaggaaagagtaacaat
gacaaagcacgttttgatattgcctggtagtattgtctcttctttacttc
catgtgcactgtttaagtgaaatttattttttgatgaggtttccctcctt
ccttgtgggccccatgttttctatatgtgttttataagaaaaagcatcct
aggacattgagggagatatagaagacactgtgtaatgtgccctatatttt
caatacagaaaatgaaaattgctttgattgtttttctaatatctggaaaa
ttttctgtactaaaaattagttttcaatgccatacatataaaataatatc
cacatgacctgaagcagtgtgtgtacctccttaagcgttaaactttgttt
ttgactatgacatccatgtagaaaagactagtaccaaatagactttaaaa
atgaataatttcgggaaaggggatgagatagaggatttcagagggggaac
caggaaaggggaaatatttgacatgtaaataaagaaaatatccaaaacaa
acaaacaaacaaacaaacaaacaaaaaatgcccagaagtactgcatgtat
tttgtaggtgatgtttattctaagaaattttccttttgtcttcctataaa
gacacatttacctcctacggtatttaaaggtaaatgtctatgggaaatgt
agagtaacacatttctggttattagcacagagagtagcacgcaggcatgt
gcattgtactgttgatttgagtagtgtctatgtaaagtacttttcttttc
agctattaataaatgacttgtgtaatgtgaaaaaattttcttgtgaaaac
acataaagtatgacatacaaaa

gaattctccttaggactctgatgaattgacagcatacagctataatcaca
gactaacatttactcatgaaaatgtctgggaagaacgatttttacctcct
gtaaggtcaatgatatttcactggtacaacctcatataggttcatcataa
cattgaaaaatatgaaaaagaaaaataaaagactgttcctgtacttgtca
tttaatagaattttaattgctaagttaaactgcagaaaaagatcatttat
tctacacaataatcctttgtgcctccctgggtacaaaaggaaggggtgca
atatatattcttcatggataattgtggaggaggggtagaaatgtaagaac
taggaaatatatggctatcgggacacagtgtcttctattcacagcagggc
agttgaatacataaactcacatcaggatgaacaagacccgtgtaagccca
agccagaccaaggttcagcacagagatgggagcttgaaacatgaaacaaa
cagaagccatgtagatattagcagtaagtcgttagctgctgggaggacag
actattgtctctaagagtgtagtcgtcggtaagctgaccaagcttcagtg
gaagatcacacacccaagagtatttggacagtatatatttgtattgatgg
gtttacaaaagaagatacatgtcagacacagtggcacatgctttgaatcc
cagcacttgaggggcagaagcaggtctatctctgtgagattaagactagc
ctagtatatataatgagctcaaggattacagagctacattgtaataactt
gtctcaaaaacaatacaaattaggtagggagaaaaggagggatgtatatg
gggaagagtt
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chrX_110566590_110567711
seq2: B6Ng01-292I14.b_45_1166

seq1  GAATTCTTAGGAAGGTACACTCACTTTTGCAGGGCAACACAGGTTAATAA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTTAGGAAGGTACACTCACTTTTGCAGGGCAACACAGGTTAATAA  50

seq1  GTGTGCTATAGCAATATTAGAAGATAACCTCAGCTATTCTATCAGGCATG  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGTGCTATAGCAATATTAGAAGATAACCTCAGCTATTCTATCAGGCATG  100

seq1  GGAATATGTTTGTATGATTAACAGTTCTTAAGTGCTTGAAATTCCTTCCT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGAATATGTTTGTATGATTAACAGTTCTTAAGTGCTTGAAATTCCTTCCT  150

seq1  GTCTGATAAGAAATTTAAAAAAACATTTAATTGACAAGATATATCTGAAA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTCTGATAAGAAATTTAAAAAAACATTTAATTGACAAGATATATCTGAAA  200

seq1  TTTCCTAAAACAGGTATGACAGTTTCATTTAAGTTGAAATGATCTGTAGC  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTCCTAAAACAGGTATGACAGTTTCATTTAAGTTGAAATGATCTGTAGC  250

seq1  ATGTTGGAGTCTCCCATGTTTTAGGGTTTATTGTAGGAAAGAGTAACAAT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGTTGGAGTCTCCCATGTTTTAGGGTTTATTGTAGGAAAGAGTAACAAT  300

seq1  GACAAAGCACGTTTTGATATTGCCTGGTAGTATTGTCTCTTCTTTACTTC  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GACAAAGCACGTTTTGATATTGCCTGGTAGTATTGTCTCTTCTTTACTTC  350

seq1  CATGTGCACTGTTTAAGTGAAATTTATTTTTTGATGAGGTTTCCCTCCTT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATGTGCACTGTTTAAGTGAAATTTATTTTTTGATGAGGTTTCCCTCCTT  400

seq1  CCTTGTGGGCCCCATGTTTTCTATATGTGTTTTATAAGAAAAAGCATCCT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTTGTGGGCCCCATGTTTTCTATATGTGTTTTATAAGAAAAAGCATCCT  450

seq1  AGGACATTGAGGGAGATATAGAAGACACTGTGTAATGTGCCCTATATTTT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGACATTGAGGGAGATATAGAAGACACTGTGTAATGTGCCCTATATTTT  500

seq1  CAATACAGAAAATGAAAATTGCTTTGATTGTTTTTCTAATATCTGGAAAA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAATACAGAAAATGAAAATTGCTTTGATTGTTTTTCTAATATCTGGAAAA  550

seq1  TTTTCTGTACTAAAAATTAGTTTTCAATGCCATACATATAAAATAATATC  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTCTGTACTAAAAATTAGTTTTCAATGCCATACATATAAAATAATATC  600

seq1  CACATGACCTGAAGCAGTGTGTGTACCTCCTTAAGCGTTAAACTTTGTTT  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACATGACCTGAAGCAGTGTGTGTACCTCCTTAAGCGTTAAACTTTGTTT  650

seq1  TTGACTATGACATCCATGTAGAAAAGACTAGTACCAAATAGACTTTAAAA  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGACTATGACATCCATGTAGAAAAGACTAGTACCAAATAGACTTTAAAA  700

seq1  ATGAATAATTTCGGGAAAGGGGATGAGATAGAGGATTTCAGAGGGGGAAC  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGAATAATTTCGGGAAAGGGGATGAGATAGAGGATTTCAGAGGGGGAAC  750

seq1  CAGGAAAGGGGAAATATTTGACATGTAAATAAAGAAAATATCCAAAACAA  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGGAAAGGGGAAATATTTGACATGTAAATAAAGAAAATATCCAAAACAA  800

seq1  ACAAACAAACAAACAAACAAACAAAAAATGCCCAGAAGTACTGCATGTAT  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAAACAAACAAACAAACAAACAAAAAATGCCCAGAAGTACTGCATGTAT  850

seq1  TTTGTAGGTGATGTTTATTCTAAGAAATTTTCCTTTTGTCTTCCTATAAA  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTGTAGGTGATGTTTATTCTAAGAAATTTTCCTTTTGTCTTCCTATAAA  900

seq1  GACACATTTACCTCCTACGGTATTTAAAGGTAAATGTCTATGGGAAATGT  950
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GACACATTTACCTCCTACGGTATTTAAAGGTAAATGTCTATGGGAAATGT  950

seq1  AAGAGTAACACATTTCTGGTTATTAGCACAGAGAGTAGCACGCAGGCATG  1000
       |||||||||||||||||||||||||||||||||||||||||||||||||
seq2  -AGAGTAACACATTTCTGGTTATTAGCACAGAGAGTAGCACGCAGGCATG  999

seq1  TGCATTGTACTG-TGATTTGAGTAGTGTCTATGTTAAAGTACTTTTC-TT  1048
      |||||||||||| |||||||||||||||||||| ||||||||||||| ||
seq2  TGCATTGTACTGTTGATTTGAGTAGTGTCTATG-TAAAGTACTTTTCTTT  1048

seq1  TCAGCTA-TAATAAATTGAACTGTGTAATGTGAAAAAATTT--CTGTGAA  1095
      ||||||| ||||||| |||  ||||||||||||||||||||   ||||||
seq2  TCAGCTATTAATAAA-TGACTTGTGTAATGTGAAAAAATTTTCTTGTGAA  1097

seq1  AACACATAAAAGTAATGACATACAAAA  1122
      ||||||| ||||| |||||||||||||
seq2  AACACAT-AAAGT-ATGACATACAAAA  1122


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