BAC Information

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BAC

Clone NameB6Ng01-292J10
ChromosomeX (Build37)
Map Location 14,189,829 - 14,190,945
singlet/doubletsinglet
Overlap genenone
Upstream geneCask, Gpr34, Gpr82, LOC385327, EG385328
Downstream geneLOC668991, 4930403L05Rik
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-292J10.bB6Ng01-292J10.g
ACCGA089188GA089189
length1,2041,109
definitionB6Ng01-292J10.b B6Ng01-292J10.g
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattctatcagacctaataccaacactcttcaaattattacacaagata
ggaacagaagggacactaccaaattcgttctatgatgccacagttacact
gatatttaaaaacacacacacacacaaagatccactaaagaaagaggact
tcagaacaatttcccttatgaatatcaatgcaaaaatgctcaataaaatt
ctcacaaactgaattctagaacacatcaaaatgatcattcacaatgatca
tgtaggcttcatcccagggatacaggggtggttcaatattcagaaatgca
tcaacataatccactatataagcaaactcaaagaaaaacaaccacatgat
cttctcattaaatgctagaaaagcatttgacaaaattctacaccctttca
tgttaaaagtcttggaaagatcaggaattcaaggcccatacctaaacata
gtaaaagcaatctacggcaaaccagtagccaaaatcaaagtaaatggagg
aaaatttgatgcgatcccactaaaatcaggaagaagacaaggctgccaac
tctgtccctatctattcaatatagtactcaaaggtctatccagagtaatt
agaagaagaaaaaaagaagaggtcaaagggataaaaattcagaaggaaga
agtcaaaatatcactatttgcagatgatatgatagtatacataagtgacc
ccaaaaattccacctgagaactcctaaatctgataaacaacttcatcaaa
gtggctggatataaaattaactcaaacaattcagtagtcttctttattca
aaggaaaaatgggctccgaacgaaattagagaaacaacacccttcataat
agtcacaattaatataaaatatcttggtgtgactctaaccatgctagtta
aagaattgtaagaaaaaaaaacttcaagactctaaagaaagaatttgacc
tcaggagatgggaaagatcttctatgatcactggtttggcaggttaacat
agtaaatggatattttaccaaaagaaatatacagagtcatgggatcccta
tcaaattctactcaatcttcactgagaatagaaagacattctcaaattcg
gttagtacaaccaaaaaacctagatagtgaactattcacaaataaatcct
gagtcacactctgaacttcaagctctgccttacgcaaaaagagctatatt
taac

gaattccaaaactacatttttcagttgtatttcctcattataaagtcaat
ggatgagacaaaaactaatgaaaagggaccttaattatgtgtatagaatt
gacttgtcaattttcctgtgaatgtggttaatgtaatttcaatgaaaata
taataaaacttatttcacaaaatgtatgtgtatattttgtgaaagctgtt
tggaaaaaaaagagaaaatcaacaacaaagacattaaaaaacagtatgag
cttttggaattacaatgctagatatgaaagtgttctgaaaatctttgata
attaaaagcagattaataaccaaagaacataaacagagtttttaaaatcc
aagtaagtgtgttcctatttatttatttatttatttatttaaatttaagc
gtgattgcagtccaactcagtcaggaaagaatgtatttttaaataaatga
tgttaaatcagatgattaaacactgaaggaaaaatgaacacaactaatta
taaattaatcaaaacagaatgtttaaagtaaagtcatagaggtaagaaga
taaaaaagaatagaaaaatagaatatagaaaacaatttatgcttgtattg
aaagatcatcttgaaagcatggcagcaatggaattaaaacagaagttcat
tgtgaaatttagatctgttcattcattgaaattgaaatactgttggcagc
tgcttttcctctaaggagacagaggaacaattgagacatggagtgtctga
aaaagcctaaaatatgtattctctgagtctcgacaggaaaagtttgctga
ctcctaatataaaacaagtttattttatgtagtaacacatgaagatgtgg
gcacataaataatattatgaacaataaataattagaaataagatttgtaa
taatttatacatggcttaggaacttacagtctatagttgttatataaagc
ttttgcaaaaatattaagaaatgttatacacaagagacaataggaaaaga
cagaacagactgtacacacacaggtggtttcgtattattaaataacaata
agctgattaaaatgtcactcctctttagtcaatgcattatatcacttagt
gcttatcag
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chrX_14189829_14190945
seq2: B6Ng01-292J10.g_63_1171

seq1  GAATTCCAAAACTACATTTTTCAGTTGTATTTCCTCATTATAAAGTCAAT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCCAAAACTACATTTTTCAGTTGTATTTCCTCATTATAAAGTCAAT  50

seq1  GGATGAGACAAAAACTAATGAAAAGGGACCTTAATTATGTGTATAGAATT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGATGAGACAAAAACTAATGAAAAGGGACCTTAATTATGTGTATAGAATT  100

seq1  GACTTGTCAATTTTCCTGTGAATGTGGTTAATGTAATTTCAATGAAAATA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GACTTGTCAATTTTCCTGTGAATGTGGTTAATGTAATTTCAATGAAAATA  150

seq1  TAATAAAACTTATTTCACAAAATGTATGTGTATATTTTGTGAAAGCTGTT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAATAAAACTTATTTCACAAAATGTATGTGTATATTTTGTGAAAGCTGTT  200

seq1  TGGAAAAAAAAGAGAAAATCAACAACAAAGACATTAAAAAACAGTATGAG  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGAAAAAAAAGAGAAAATCAACAACAAAGACATTAAAAAACAGTATGAG  250

seq1  CTTTTGGAATTACAATGCTAGATATGAAAGTGTTCTGAAAATCTTTGATA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTTTGGAATTACAATGCTAGATATGAAAGTGTTCTGAAAATCTTTGATA  300

seq1  ATTAAAAGCAGATTAATAACCAAAGAACATAAACAGAGTTTTTAAAATCC  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTAAAAGCAGATTAATAACCAAAGAACATAAACAGAGTTTTTAAAATCC  350

seq1  AAGTAAGTGTGTTCCTATTTATTTATTTATTTATTTATTTAAATTTAAGC  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGTAAGTGTGTTCCTATTTATTTATTTATTTATTTATTTAAATTTAAGC  400

seq1  GTGATTGCAGTCCAACTCAGTCAGGAAAGAATGTATTTTTAAATAAATGA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGATTGCAGTCCAACTCAGTCAGGAAAGAATGTATTTTTAAATAAATGA  450

seq1  TGTTAAATCAGATGATTAAACACTGAAGGAAAAATGAACACAACTAATTA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTTAAATCAGATGATTAAACACTGAAGGAAAAATGAACACAACTAATTA  500

seq1  TAAATTAATCAAAACAGAATGTTTAAAGTAAAGTCATAGAGGTAAGAAGA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAATTAATCAAAACAGAATGTTTAAAGTAAAGTCATAGAGGTAAGAAGA  550

seq1  TAAAAAAGAATAGAAAAATAGAATATAGAAAACAATTTATGCTTGTATTG  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAAAAAGAATAGAAAAATAGAATATAGAAAACAATTTATGCTTGTATTG  600

seq1  AAAGATCATCTTGAAAGCATGGCAGCAATGGAATTAAAACAGAAGTTCAT  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAGATCATCTTGAAAGCATGGCAGCAATGGAATTAAAACAGAAGTTCAT  650

seq1  TGTGAAATTTAGATCTGTTCATTCATTGAAATTGAAATACTGTTGGCAGC  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTGAAATTTAGATCTGTTCATTCATTGAAATTGAAATACTGTTGGCAGC  700

seq1  TGCTTTTCCTCTAAGGAGACAGAGGAACAATTGAGACATGGAGTGTCTGA  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCTTTTCCTCTAAGGAGACAGAGGAACAATTGAGACATGGAGTGTCTGA  750

seq1  AAAAGCCTAAAATATGTATTCTCTGAGTCTCGACAGGAAAAGTTTGCTGA  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAAGCCTAAAATATGTATTCTCTGAGTCTCGACAGGAAAAGTTTGCTGA  800

seq1  CTCCTAATATAAAACAAGTTTATTTTATGTAGTAACACATGAAGATGTGG  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCCTAATATAAAACAAGTTTATTTTATGTAGTAACACATGAAGATGTGG  850

seq1  GCACATAAAATAATATTATGAACAATAAATAATTAGAAATAAGATTTGTA  900
      |||||| |||||||||||||||||||||||||||||||||||||||||||
seq2  GCACAT-AAATAATATTATGAACAATAAATAATTAGAAATAAGATTTGTA  899

seq1  ATAATTTATACATGGCTTAGGAACTTACAGTCTATAGTTGTTATATAAAG  950
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATAATTTATACATGGCTTAGGAACTTACAGTCTATAGTTGTTATATAAAG  949

seq1  CTTTTGC-AAAATATTAAGAAATGTTATACACAAGAAGACAAATAAGAAA  999
      ||||||| ||||||||||||||||||||||||||| |||| |||| ||||
seq2  CTTTTGCAAAAATATTAAGAAATGTTATACACAAG-AGAC-AATAGGAAA  997

seq1  AGACAGAAACAGACTGTACACAACACAGGTGGTTTTCGTATTA-TAAATA  1048
      |||||| |||||||||||||| |||||||||| |||||||||| ||||||
seq2  AGACAG-AACAGACTGTACAC-ACACAGGTGG-TTTCGTATTATTAAATA  1044

seq1  ACCAATAAGCTGATAAAAATGTCAACTCTCTTTTAGTCAAATGCATTTAA  1098
      | |||||||||||| |||||||| ||||   ||||||| ||||||||   
seq2  A-CAATAAGCTGATTAAAATGTC-ACTCCTCTTTAGTC-AATGCATT---  1088

seq1  ATATCAC-TAGTG-TTATCAG  1117
      ||||||| ||||| |||||||
seq2  ATATCACTTAGTGCTTATCAG  1109


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