MoG+ -Mouse Genome database with high added value-

BAC Information

BAC name
Region	Chromosome -
Gene	search by nearby gene name.
Format	rows / page	Page	1

BAC

Clone Name	B6Ng01-297O05
Chromosome	X (Build37)
Map Location	38,367,510 - 38,368,610
singlet/doublet	singlet
Overlap gene	none
Upstream gene	EG245391, LOC100039769
Downstream gene	LOC385344, Gria3, LOC100039802, LOC676077, Thoc2, LOC665488, EG333830, LOC100039838
Link	Open Mouse BAC browser

Click to get alignment info.

name	EG245391 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:245391 MGI:3647545
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 55 ESTs, 3 Proteins

name	LOC100039769 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:100039769
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 mRNA

name	LOC385344 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:385344
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 91 ESTs, 2 Proteins pseudo : _no_value

name	Gria3 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:53623 MGI:95810
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	LOC100039802 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:100039802
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 2 Proteins pseudo : _no_value

name	LOC676077 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:676077
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 8 Proteins pseudo : _no_value

name	Thoc2 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:331401 MGI:2442413
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	LOC665488 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:665488
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 6 Proteins pseudo : _no_value

name	EG333830 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:333830 MGI:3646830
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 8 Proteins

name	LOC100039838 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:100039838
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 Protein pseudo : _no_value

name	EG245391 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:149271552 GeneID:245391 MGI:3647545
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 49 ESTs, 2 Proteins product : predicted gene, EG245391 transcript_id : XM_141707.7

name	LOC100039769 (CDS detail)
type	mRNA
link	vega ensembl NCBI
xref	GI:149271523 GeneID:100039769
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 mRNA product : similar to pol protein transcript_id : XM_001473464.1

name	Gria3 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:84781716 GeneID:53623 MGI:95810
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : glutamate receptor, ionotropic, AMPA3 (alpha 3) transcript_id : NM_016886.2

name	Thoc2 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:125656162 GeneID:331401 MGI:2442413
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : THO complex 2 transcript_id : NM_001033422.1

name	EG333830 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:94407343 GeneID:333830 MGI:3646830
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 8 Proteins product : predicted gene, EG333830 transcript_id : XM_912534.2

name	EG245391 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:149271553 GeneID:245391 MGI:3647545
definition	codon_start : 1 product : similar to Ac2-210 protein_id : XP_141707.5

name	LOC100039769 (CDS detail)
type	CDS
link	vega ensembl NCBI
xref	GI:149271524 GeneID:100039769
definition	codon_start : 1 product : similar to pol protein protein_id : XP_001473514.1

name	Gria3 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:84781717 CCDS:CCDS30097.1 GeneID:53623 MGI:95810
definition	GO_component : GO:0016021 - integral to membrane [Evidence IEA]; GO:0016020 - membrane [Evidence IEA]; GO:0045211 - postsynaptic membrane [Evidence IEA] GO_function : GO:0005234 - glutamate-gated ion channel activity [Evidence IEA]; GO:0005216 - ion channel activity [Evidence IEA]; GO:0004970 - ionotropic glutamate receptor activity [Evidence IEA]; GO:0005515 - protein binding [Evidence IPI]; GO:0004872 - receptor activity [Evidence IEA] GO_process : GO:0006811 - ion transport [Evidence IEA] codon_start : 1 exception : mismatches in translation note : cAMP-dependent Rap1 guanine-nucleotide exchange factor; AMPA-selective glutamate receptor 3 (GluR-3) flip product : glutamate receptor, ionotropic, AMPA3 (alpha 3) protein_id : NP_058582.2

name	Thoc2 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:125656163 GeneID:331401 MGI:2442413
definition	codon_start : 1 note : transcription/export complex subunit 2 product : THO complex subunit 2 protein_id : NP_001028594.1

name	EG333830 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:94407344 GeneID:333830 MGI:3646830
definition	codon_start : 1 product : similar to ribosomal protein S7 protein_id : XP_917627.2

name	LOC100039802 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:100039802
definition	number : 3 pseudo : _no_value

name	LOC100039802 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:100039802
definition	number : 2 pseudo : _no_value

name	LOC100039802 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:100039802
definition	number : 1 pseudo : _no_value

name	LOC676077 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:676077
definition	number : 4 pseudo : _no_value

name	LOC676077 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:676077
definition	number : 3 pseudo : _no_value

name	LOC676077 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:676077
definition	number : 2 pseudo : _no_value

name	LOC676077 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:676077
definition	number : 1 pseudo : _no_value

name	LOC665488 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:665488
definition	number : 1 pseudo : _no_value

name	LOC665488 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:665488
definition	number : 2 pseudo : _no_value

name	LOC100039838 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:100039838
definition	number : 1 pseudo : _no_value

name	LOC100039838 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:100039838
definition	number : 2 pseudo : _no_value

name	LOC100039838 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:100039838
definition	number : 3 pseudo : _no_value

name	LOC385344 (CDS detail)
type	misc_RNA
link	vega ensembl NCBI
xref	GI:149271554 GeneID:385344
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 91 ESTs, 2 Proteins product : similar to 3-phosphoglycerate dehydrogenase pseudo : _no_value transcript_id : XR_032497.1

clone name	MSMg01-500J03
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-267F11
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-344D05
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-364D02
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-386E20
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-489K06
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-514N21
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-051A17
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-177G15
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-168B15
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-392G23
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-337B06
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-197E16
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-233B17
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-398C23
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-321D22
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-395B23
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-156L08
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-109O16
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-117J21
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-054P13
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-500G22
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-144D02
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-437B06
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-207B08
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-207B08
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-338K18
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-289C08
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-296H11
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-066N12
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-064J02
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-400P17
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-321C05
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-428K07
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-394H11
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-058B01
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-061I15
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-066A18
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-206A22
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-418E01
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-162C11
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-547C15
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-526A01
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-070J17
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-418E01
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-407M07
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-094G20
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-274L11
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-535B07
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-289F23
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-318B04
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-064K12
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-268G16
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-157M17
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-349F15
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-104I11
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-284N23
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-245J01
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-304N13
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-049J06
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-116B17
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-272G17
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-335J14
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-254N14
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-172O16
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-051E05
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-214O01
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-142K02
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-276P23
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-307N05
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-175G06
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-029F08
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-074G18
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-283G17
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-206K09
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-208H09
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-143G18
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-200L04
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-297O05
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-059F17
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-164N17
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-214A05
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-205K14
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-005D09
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-140A11
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-073M04
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-073E01
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-158J07
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-114A21
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-034I02
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-103C04
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-214A05
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-167I03
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-004A23
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-299B07
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-103C04
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-285M10
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-095G11
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-130I16
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-249J18
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-165C23
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-177B04
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-271C22
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-044N08
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-317F05
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-277M13
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-183P10
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-024H22
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-313N20
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-148B19
singlet/doublet	doublet
plural/unique	unique

BAC End Information

BAC end	BAC-end 1	BAC-end 2
end name	B6Ng01-297O05.b	B6Ng01-297O05.g
ACC	GA093138	GA093139
length	1,230	1,125
definition	B6Ng01-297O05.b	B6Ng01-297O05.g
singlet/doublet	---	singlet
BLAST hit	no hit data	unique
sequence	gaattcttccctaaacccatctggtcctgggcttttttttttggttgaga gactaataatgactgcttctatttctttagggggtatgggactgtttaga tcgttaacttgatcctgatttaactttggtacctgttatctgtctagaaa tttgtccatttcatccaggttttccagatttcaagagtattgtcttttgt agaaggatctgatggtgttttagattacttcaggatctgttgttatgtct ccattttcatttctgattttgttaattaggatgctaccctgtgccctcta gtgagtatggttaaagatttatctatcttgctgattttctcaaagaacca gctcctcatttgtttgattctttgaatagttcttgtttccactttgtgga tttcaccactgagtttgattatttcctgctgtctactcctcttggttgaa tttgcttccttttgctctagagcttttaggtgtgttgccaagctgctaat gtgtgctctctctagtttctttttggaggcattcagagctatgaggtttc ctcttagaaatgctttcattgtgtcccataagtttgggtatgttgtggct tcattttcattaaactccaaaaagtccttagtttctttctttcttccttc tttgaccaagctatcattaagaagagtgttgttcattttccacgtgaatg ttggctttctattatttatgttgttattgaagttcagccttagtccatgg tggtctgataggatgcatgggacaatttcaatatttttgtatctgttgag gcctgttttatgaccaattatatggtcaattttggagaaggtcccatgag gtgctgagaaggtatatccttttgttttaggataaaaggtctgtagagat ctgttaagtccatctgtttcataacttctgttagtttcactgtgtccctg tttaatttctgtttccatgatctgtccattgatgaaagtggtgtgctgaa gtatccacttattattgtggtgaggtgcaatgtgtgctttgaagcttact aaagtgtctttattgatgtgggcctgccatggtataggagcataatattc gaattgaaagtttccttggagattacttgatggacataagttccctcatt gatcctttgtacctgggttggaaagcaatatgatgaatgtcatcagctgt gctcgacacttgctggaactagtttctaga	gaattctaggtgaactgttctaagtattatgctgggagcacttactgaca aattaaagatttcagtgctggaaaagattatgaggccaagactcaatctg gtttttcaaaaaaggttttatgaaggttaatttgttagttgggtagagga tggatagaaacaagagataacagaacataagcaaaacatggacaccagct cagatactcatgtaatcaacaatttgagatgacattgacctaggtctggg tcagtgtaagagcatatatctgaaacagatgaaaagtgagtgaaaaatat tgctgagaaaatgatgtctctcaaagtcttagctatttaacttctatcca tatatcaaaatgaacaataagtacttcaagatcttaatttccaatggttg tatatgaatttatctatattgtagtacatcaaagtacactattaaaatga ggttcttttccagattctagtgtcagtctcagttttgttcattttttttc aaaattacaaaactgaactaaagatcaacttgaataggtgaatttggtga aagaatatagaagcagttattgaatttaggggattaatagaatttctaga ggaagcattaacttgaagcaaaactggaaaatccaagaagtaagacatta aatatctctcaatctctctctaactcattatctctgtttctttctgtctc tatttgtttgtctgtatctctctctctctcttacacacacacacacacac acacacacacacacacacacagacaaaacaggtactttcctacatccctc ttttcacaaataaaatttattttaggagactaaacaaagctctatatttt aataatttaaatgtgggattctttcattaaccatgaagaatagaactcca tgggaaaatgagacacaggagcagttttgactttaaaccattaaagcaaa cagagcatctgagttgttctgaataggagcaacatgaaatggaagtttgt ggtaagaacaacatgaggtggccaaacacaaaaagcagaagaaggttctt aaaagaataaaacattccattcttatatttcaggattgaagcatcccatg actacttacttttgggtttaactat
quality values	Open. Hide. 58 17 22 30 62 62 62 62 47 62 62 54 56 56 62 56 56 47 39 62 62 62 62 44 56 62 59 59 49 49 62 59 59 59 56 56 59 59 62 62 62 54 62 59 59 62 59 62 59 62 62 59 43 62 59 56 54 56 56 59 54 59 59 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 59 59 62 62 62 62 59 59 59 62 62 62 59 59 62 62 62 62 59 59 56 62 62 62 62 62 62 59 59 59 62 62 62 59 62 62 62 62 62 59 62 62 62 59 59 62 62 49 54 59 62 59 59 62 62 62 62 62 59 59 62 62 62 62 62 62 59 59 51 62 59 59 62 62 62 62 62 62 54 54 62 62 62 59 59 62 62 59 49 51 59 59 62 62 62 62 59 59 50 62 59 59 59 59 62 62 62 62 62 62 62 62 62 62 59 62 62 62 62 62 62 59 59 51 62 62 59 62 59 59 59 59 59 62 59 62 62 59 62 62 62 62 62 62 50 62 62 59 56 62 62 62 59 51 50 62 59 62 59 59 62 59 62 62 62 62 62 62 62 62 62 62 62 62 59 62 62 62 54 62 59 62 62 54 62 62 62 62 59 59 56 59 62 62 62 62 62 62 62 62 59 62 59 59 62 62 59 62 62 62 62 62 62 59 62 59 62 62 56 62 59 62 56 56 62 62 59 56 59 59 62 62 56 62 59 62 59 56 59 62 62 59 59 59 59 59 59 62 62 62 62 62 59 59 59 62 59 62 62 62 62 62 62 59 59 62 59 62 62 62 62 59 51 62 62 62 62 62 62 59 62 62 49 62 62 62 62 62 62 59 62 59 56 56 56 56 62 62 62 62 56 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 56 62 62 62 62 62 62 62 56 62 62 56 62 62 47 47 47 62 62 62 56 62 47 56 56 56 62 62 62 62 62 62 56 62 62 56 62 62 62 62 62 62 62 62 62 62 62 62 56 50 56 56 62 56 56 62 62 62 62 62 62 62 62 56 62 62 62 62 62 62 62 47 62 56 62 56 62 62 62 62 47 56 47 62 62 62 62 62 62 62 62 48 54 43 62 52 62 62 62 54 54 51 62 62 62 54 62 54 62 54 62 62 52 54 54 54 45 48 50 58 58 52 54 54 52 52 54 54 58 54 58 48 58 54 52 54 58 54 46 42 58 52 54 58 49 58 54 58 39 45 49 52 48 48 52 54 53 58 58 54 42 58 54 43 42 58 54 54 58 54 58 52 54 58 58 54 54 52 52 52 52 52 54 46 54 54 58 58 54 54 58 54 52 52 46 58 54 58 58 40 58 41 52 51 51 52 50 50 58 49 38 53 50 38 42 31 49 41 42 51 49 37 37 51 58 58 58 52 50 50 54 54 51 54 32 54 54 50 52 51 58 51 52 50 44 49 52 52 50 42 43 41 50 46 52 54 54 44 50 32 32 25 41 37 49 49 36 43 41 46 46 37 31 50 32 58 58 32 58 27 50 51 46 49 54 32 49 49 37 52 51 51 50 50 52 39 51 50 53 52 50 50 36 51 49 42 53 50 39 41 54 50 38 30 51 31 32 50 42 49 31 41 34 47 37 53 46 18 39 34 32 50 29 40 54 24 38 27 32 37 20 34 40 47 42 39 26 37 49 49 32 39 37 44 22 54 52 39 42 45 52 37 29 39 25 52 35 23 34 36 32 42 53 42 31 15 27 42 32 51 36 33 20 13 46 37 52 30 49 49 44 46 33 36 32 42 39 45 53 35 32 31 41 23 36 22 36 36 53 18 40 40 31 30 17 26 32 21 53 32 47 32 32 31 41 40 34 32 40 23 33 31 31 30 51 45 31 42 37 51 24 41 51 5 12 18 35 31 32 28 37 31 37 26 31 26 34 29 31 21 45 22 38 32 6 27 10 27 27 28 28 30 42 33 42 42 32 31 23 40 40 36 17 10 6 18 18 26 41 40 16 19 20 24 23 27 41 24 37 16 37 23 24 31 27 27 37 22 22 37 33 24 31 26 32 27 38 31 31 31 24 33 25 22 20 30 32 25 31 27 25 27 19 22 11 21 42 22 28 27 21 18 24 24 28 21 10 24 30 31 47 20 18 37 13 35 15 33 27 26 38 26 21 14 17 11 36 8 33 18 30 32 27 22 26 32 11 29 8 22 21 24 21 14 27 19 8 23 32 36 21 18 21 27 28 6 22 17 31 28 27 18 25 23 7 5 8 10 24 23 13 6 7 7 8 22 8 23 20 17 13 6 14 10 7 10 12 9 22 7 14 21 16 15 18 15 5 11 9 23 20 16 32 28 11 11 14 10 9 13 13 6 10 8 15 29 13 18 8 22 13 27 13 28 15 10 7 10 9 21 6 7 6 10 11 23 11 13 13 8 6 21 8 27 7 12 6 6 19 9 11 7 14 5 14 16 8 8 4 7 8 8 19 11 4 14 8 8 22 16 8 6 6 4 12 22 21 4 3 3 8 5 3 4 7 6 7 7 6 17 13 13 12 7 11 6 10 4 3 6 10 4 3 1 1 3 16 28 11 6 15 4 11 9 16 9 9 6 5 11 10 12 3 3 2 5 5 15 10 17 9 4 7 6 5 9 12 11 12 21 16 7 13 3 5 5 2 2 3 3 6 4 3 3 8 5 5 7 7 5 8 3 6 5 13 10 7 3 1 3 6 7 11 9 6 4 8 11 11 2 5 3 1 3 4 6 26 30 24 7 5 6 6 4	Open. Hide. 62 49 37 47 62 62 54 47 56 62 51 56 35 34 38 45 46 34 45 62 59 56 59 62 59 59 59 59 56 59 59 59 59 62 54 54 54 62 62 62 59 62 62 62 59 62 62 59 62 59 59 62 62 59 62 62 62 62 59 59 54 43 46 49 51 59 62 62 62 62 62 59 59 59 59 56 59 59 59 59 62 62 62 59 62 59 59 56 56 40 54 59 62 62 59 59 62 62 59 62 62 59 62 62 62 62 62 59 59 62 59 59 59 62 62 62 62 62 59 59 62 59 62 54 59 62 59 59 62 62 62 62 62 62 62 59 59 59 62 62 62 62 62 59 56 59 62 62 62 59 59 62 62 59 62 62 59 62 62 62 62 59 62 62 62 62 59 62 62 62 62 62 62 62 59 62 59 62 59 59 59 62 62 62 62 56 56 50 56 59 59 59 62 62 62 42 54 56 62 62 62 59 49 62 62 62 62 62 62 59 62 62 62 59 62 62 54 62 62 62 62 62 62 62 62 62 62 59 62 62 62 62 62 62 62 62 62 59 62 62 59 62 59 62 62 62 62 62 62 62 62 62 62 59 56 62 59 62 62 62 62 62 62 59 59 59 59 59 59 62 62 62 62 59 62 62 62 59 59 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 59 59 62 59 62 59 59 59 62 49 62 62 62 62 59 62 62 59 62 59 59 62 62 62 62 59 62 62 62 62 62 62 62 62 59 62 59 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 59 59 56 50 50 59 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 59 62 49 49 62 62 62 62 62 62 62 62 62 62 62 59 59 62 62 62 62 59 56 62 56 46 62 56 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 56 62 56 62 62 62 56 62 56 56 56 62 62 62 62 62 62 54 62 62 62 54 51 56 56 56 56 62 62 62 62 56 56 56 56 56 62 62 62 54 47 56 62 62 62 62 62 54 56 62 62 62 62 56 56 62 62 62 62 56 56 62 62 62 62 62 62 62 62 43 62 62 62 62 62 62 62 62 62 46 62 62 62 62 62 62 62 42 62 62 62 62 62 62 62 62 62 62 45 62 62 62 62 62 62 62 62 62 62 62 54 46 46 52 58 54 58 54 58 58 58 54 58 58 58 54 54 58 58 54 52 52 58 52 52 52 54 54 50 54 54 52 54 52 54 58 58 52 54 54 58 54 48 41 58 58 48 42 54 47 52 42 26 48 52 54 52 52 46 54 43 54 58 54 52 49 53 50 54 31 45 58 49 52 52 38 34 42 46 46 51 51 51 51 51 49 50 49 50 50 51 50 49 51 58 58 47 58 58 50 40 49 51 46 51 38 58 41 46 50 51 54 42 50 37 34 47 40 35 42 44 43 50 37 49 58 51 46 52 46 20 34 50 50 51 53 54 52 51 34 33 44 48 47 39 41 49 42 50 42 50 50 54 40 58 42 58 51 51 52 49 40 47 50 46 23 40 32 43 37 50 40 40 43 39 28 50 30 54 33 43 42 44 29 42 43 40 40 50 40 47 39 58 42 58 41 54 32 39 40 40 51 40 31 46 38 51 46 53 50 35 33 32 51 51 52 49 44 28 51 51 50 51 51 32 31 32 33 40 34 40 35 51 41 51 47 47 31 47 32 39 31 40 40 54 54 38 31 12 12 36 32 31 40 32 51 11 9 46 33 35 33 26 28 23 42 39 35 37 37 54 51 26 28 9 16 19 52 53 31 32 49 47 15 12 40 12 20 33 46 21 10 6 11 25 38 26 40 13 28 13 52 14 33 19 49 23 22 34 32 43 40 31 40 34 31 51 51 37 36 45 31 31 41 21 47 45 23 45 9 18 51 19 28 45 9 34 19 25 27 19 51 11 28 29 32 20 36 8 11 30 25 31 22 29 28 18 43 31 13 24 13 30 46 30 29 28 30 11 27 31 40 22 26 42 42 24 20 31 21 6 27 29 20 28 28 12 27 31 17 27 16 18 31 46 46 10 7 12 19 31 41 30 10 36 19 8 14 10 29 32 10 29 5 17 7 10 46 13 17 32 24 44 23 31 21 15 25 27 29 19 6 31 31 10 8 16 20 25 20 32 9 10 16 12 9 10 9 30 22 12 26 22 17 11 25 41 24 26 23 30 16 11 13 10 44 19 31 10 21 25 5 5 7 8 6 7 5 6 6 7 19 18 7 16 24 10 14 14 48 10 10 37 36 19 6 5 7 25 32 33 47 33 21 14 16 16 32 20 5 8 15 7 13 32 19 13 9 18 37 32 33 17 8 33 9 11 8 26 28 21 18 13 19 13 14 27 11 22 5 4 7 26 12 7 10 6 6 7 14 5 5 5 16 13 21 20 8 11 10 28 5 3 7 16 19 12 14 18 11 15 28 10 30 5 13 16 12 14 33 28 11 27 22 20 6 25 22 5 8 9 17 6 13

Alignment Information

BAC End 1

BAC End 2

seq1: chrX_38367510_38368610
seq2: B6Ng01-297O05.g_68_1192

seq1  GAATTCTAGGTGAACTGTTCTAAGTATTATGCTGGGAGCACTTACTGACA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTAGGTGAACTGTTCTAAGTATTATGCTGGGAGCACTTACTGACA  50

seq1  AATTAAAGATTTCAGTGCTGGAAAAGATTATGAGGCCAAGACTCAATCTG  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATTAAAGATTTCAGTGCTGGAAAAGATTATGAGGCCAAGACTCAATCTG  100

seq1  GTTTTTCAAAAAAGGTTTTATGAAGGTTAATTTGTTAGTTGGGTAGAGGA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTTTTCAAAAAAGGTTTTATGAAGGTTAATTTGTTAGTTGGGTAGAGGA  150

seq1  TGGATAGAAACAAGAGATAACAGAACATAAGCAAAACATGGACACCAGCT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGATAGAAACAAGAGATAACAGAACATAAGCAAAACATGGACACCAGCT  200

seq1  CAGATACTCATGTAATCAACAATTTGAGATGACATTGACCTAGGTCTGGG  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGATACTCATGTAATCAACAATTTGAGATGACATTGACCTAGGTCTGGG  250

seq1  TCAGTGTAAGAGCATATATCTGAAACAGATGAAAAGTGAGTGAAAAATAT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCAGTGTAAGAGCATATATCTGAAACAGATGAAAAGTGAGTGAAAAATAT  300

seq1  TGCTGAGAAAATGATGTCTCTCAAAGTCTTAGCTATTTAACTTCTATCCA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCTGAGAAAATGATGTCTCTCAAAGTCTTAGCTATTTAACTTCTATCCA  350

seq1  TATATCAAAATGAACAATAAGTACTTCAAGATCTTAATTTCCAATGGTTG  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATATCAAAATGAACAATAAGTACTTCAAGATCTTAATTTCCAATGGTTG  400

seq1  TATATGAATTTATCTATATTGTAGTACATCAAAGTACACTATTAAAATGA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATATGAATTTATCTATATTGTAGTACATCAAAGTACACTATTAAAATGA  450

seq1  GGTTCTTTTCCAGATTCTAGTGTCAGTCTCAGTTTTGTTCATTTTTTTTC  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTTCTTTTCCAGATTCTAGTGTCAGTCTCAGTTTTGTTCATTTTTTTTC  500

seq1  AAAATTACAAAACTGAACTAAAGATCAACTTGAATAGGTGAATTTGGTGA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAATTACAAAACTGAACTAAAGATCAACTTGAATAGGTGAATTTGGTGA  550

seq1  AAGAATATAGAAGCAGTTATTGAATTTAGGGGATTAATAGAATTTCTAGA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGAATATAGAAGCAGTTATTGAATTTAGGGGATTAATAGAATTTCTAGA  600

seq1  GGAAGCATTAACTTGAAGCAAAACTGGAAAATCCAAGAAGTAAGACATTA  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGAAGCATTAACTTGAAGCAAAACTGGAAAATCCAAGAAGTAAGACATTA  650

seq1  AATATCTCTCAATCTCTCTCTAACTCATTATCTCTGTTTCTTTCTGTCTC  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATATCTCTCAATCTCTCTCTAACTCATTATCTCTGTTTCTTTCTGTCTC  700

seq1  TATTTGTTTGTCTGTATCTCTCTCTCTCTCTTACACACACACACACACAC  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATTTGTTTGTCTGTATCTCTCTCTCTCTCTTACACACACACACACACAC  750

seq1  ACACACACACACACACACACAGACAAAACAGGTAC-TTCCTACATCCCTC  799
      ||||||||||||||||||||||||||||||||||| ||||||||||||||
seq2  ACACACACACACACACACACAGACAAAACAGGTACTTTCCTACATCCCTC  800

seq1  TTTTCACAAATAAAATT--ATTTAGGAGACT-AACAAAGCTCTATATTTT  846
      |||||||||||||||||   ||||||||||| ||||||||||||||||||
seq2  TTTTCACAAATAAAATTTATTTTAGGAGACTAAACAAAGCTCTATATTTT  850

seq1  AATAATTT-AATGT-GGATTC-TTCATTAACCATGAAGAATAGAACTCCA  893
      |||||||| ||||| |||||| ||||||||||||||||||||||||||||
seq2  AATAATTTAAATGTGGGATTCTTTCATTAACCATGAAGAATAGAACTCCA  900

seq1  TGGG-AAATGAGACACAGGAGCAG-TTTGACTTTAAACCATTAAGGCAAA  941
      |||| ||||||||||||||||||| ||||||||||||||||||| |||||
seq2  TGGGAAAATGAGACACAGGAGCAGTTTTGACTTTAAACCATTAAAGCAAA  950

seq1  CAGAGCATCTGAGTTG-TCTG-ATAGGAGCAACATGAAATGGA--GTTGT  987
      |||||||||||||||| |||| |||||||||||||||||||||   ||||
seq2  CAGAGCATCTGAGTTGTTCTGAATAGGAGCAACATGAAATGGAAGTTTGT  1000

seq1  GGTAGGA--CACATGAGGTGG-CAAACACAAAAAGCAG-AGAAGGTTC-T  1032
      |||| ||   ||||||||||| |||||||||||||||| ||||||||| |
seq2  GGTAAGAACAACATGAGGTGGCCAAACACAAAAAGCAGAAGAAGGTTCTT  1050

seq1  AAAAGAATAAAACATTCCA-TCTTATA-ATCA-GATTGAAGCAT-CCATG  1078
      ||||||||||||||||||| |||||||  ||| ||||||||||| |||||
seq2  AAAAGAATAAAACATTCCATTCTTATATTTCAGGATTGAAGCATCCCATG  1100

seq1  ACTACCTAC-TTTGGGTTT-ACTAT  1101
      ||||| ||| ||||||||| |||||
seq2  ACTACTTACTTTTGGGTTTAACTAT  1125

BAC Information

Search Parameter

Search Result

BAC

BAC End Information

Alignment Information