BAC Information

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BAC

Clone NameB6Ng01-300L07
ChromosomeX (Build37)
Map Location 63,777,043 - 63,778,107
singlet/doubletsinglet
Overlap genenone
Upstream geneLOC671840
Downstream geneSlitrk2, LOC666824, LOC627734, EG666828
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-300L07.bB6Ng01-300L07.g
ACCGA095214GA095215
length1,2331,064
definitionB6Ng01-300L07.b B6Ng01-300L07.g
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattctatcatactttcaaagaagacctaattccaactctactcaaact
tttccacaaaatagaaacaggaggtactctacccaattcattctatgaag
ccacaattactctgatgcataaaccacacaaagatccaacaaagaaagag
aacttcagaccaatttcccttttgaatatcaatggaaaaatactcaataa
gatccttgcaaactgaattcaagaatacatcaaaaagatcattcatcgtg
atcatgtaggctccatcccagggatgtaggaatggtttaatatacggaaa
tccatctatgaaatccactatataacaaactcaaagacaaaaatcacatg
atcatcctgttagatgctgagaaagcatttgacaaaacccaacacctctt
catgagaaaagccatggaaagatcaggaactcaagacccatacctaaaca
tagtaaaagtaatcaacagcaaagctgtaaccaaagaaactaaatggaga
gaagctggaagcaatcccactaaaatcaggaactagaaaaggctgcccac
tttctccctacctattcaatatagcacttggaagtcctatccatagcaat
tagacaacaaaaggatatcaagggaacacaaattagaaaggaagtaggca
aaataccactatttgcagatgatatggtagtatatataagtgaccctaaa
aatcccaccagagaactcctaaacctgataaacagcttcagtgcagtagc
tagatatcaaattaactcaaacaagtcaatggccttttaatacacaaaag
ataaacaggatgagaaagaaattagggaaacaacacccttctcaatagtc
acaaatataatataaaataccttggtgtgactctgactaaggaagtgaaa
gatctgtatgacaagaatgtcaagactctgaagaaagaaattgaagatct
cagaagatgggaaagacctcccatgctcatgggattggcagatcaacatt
gtaaaaatggctattcttgccaaagcattcttacagtttgatgcatcgca
tcaaaattccaactcattctcacgattagaaagaagcaatctgcaatctc
tggataacaaaaacctaggatagccaaaactctttctaacaataaagagc
tctctggggatcacatggctgaacttcaagccgaactatctgagacaagt
tggtgtgaatataaaatttggccactggtgctt

gaattctcttggtggtttatatagctcctttcatagaattagggtaggaa
tccaaaacaaaccaaaaccaaaaacccagcattgtttaaagctataataa
tgaggatgcttcactttaagtggactaaattctaaagtgatcccagtggc
tctgaagaagtcagggagtccattttattctgtgcttaagaagcattccc
ctgaaggaatcctgctgattctggagattaaggaagaacttcctggtgat
aattaattaattgcatgcaccactttaatttcaaatgaatcatttaagtt
tggggataaataaaatcctctaaactgtgaaaggaaaaggaaaaggagtg
ttgatgaccatatccttatttgtgtactttagtttatttctcttactaat
gttgccatgactgccacctctagagctcagaagaggtccagactgctttt
taaaaatcatcataattattttacttaattaacaattcagcattgcaccc
tcagacccctctcccacagttcctcatcttattcttcctccccactgtct
ctaagaggatgctcccctccccaccagccctcccctctccctggggcctc
aagtctctccaggattaagtgcatcttcttccactgaggtcagactgctt
tttaaaactagacttacatacaccccttaactgttgccagaggactgacc
cctggtacagatagtatgttgctagaaaaataacatgacccaaggcattt
tgtgcatttcttcttatttaaattcattactatagtttgtgtgtgtgtgc
ttgtgtgtgtgtgtgtgtgtgtgtgtatctgtgttcgggaaagcatgcac
atttcatgcaattatcattcatatggagagaacagaggacaactttttgg
aaattggttctctttttccactgtagattttgaggatcaactcaggtcat
ctctttgagtagaatagggattcttctaaaactgggtaaaatttagctac
ccctaatagtgtgaacacagtaaaggcgttcagcagttttgaatgacttg
atctagtgtagatt
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chrX_63777043_63778107
seq2: B6Ng01-300L07.g_68_1131 (reverse)

seq1  AATCTACACTAGAATCAATTCATTCAAAAACTGCTGAACGCCTTTACTGT  50
      |||||||||||| ||||| |||||| ||||||||||||||||||||||||
seq2  AATCTACACTAG-ATCAAGTCATTC-AAAACTGCTGAACGCCTTTACTGT  48

seq1  GGTCAACACTATAGGGGGTAGCTAAATTTTAACCAGTTTTAGAAGAATCC  100
      | || |||||||  ||||||||||||||||| ||||||||||||||||||
seq2  GTTC-ACACTATTAGGGGTAGCTAAATTTTACCCAGTTTTAGAAGAATCC  97

seq1  CTATTCTACTCAAAGAGATGACCTGAGTTTGATCCTCAAAATCTACAGTG  150
      ||||||||||||||||||||||||||| ||||||||||||||||||||||
seq2  CTATTCTACTCAAAGAGATGACCTGAG-TTGATCCTCAAAATCTACAGTG  146

seq1  GAAAAAGAGAACCAATTTCC-AAAAGTTGTCCTCTGTTCTCTCCATATGA  199
      |||||||||||||||||||| |||||||||||||||||||||||||||||
seq2  GAAAAAGAGAACCAATTTCCAAAAAGTTGTCCTCTGTTCTCTCCATATGA  196

seq1  ATGAT-ATTGCATG-AATGTGCATGCTTTCCCGAACACAGATACACACAC  247
      ||||| |||||||| |||||||||||||||||||||||||||||||||||
seq2  ATGATAATTGCATGAAATGTGCATGCTTTCCCGAACACAGATACACACAC  246

seq1  ACACACACACACACACAAGCACACACACACAAACTATAGTAATGAATTTA  297
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACACACACACACACACAAGCACACACACACAAACTATAGTAATGAATTTA  296

seq1  AATAAGAAGAAATGCACAAAATGCCTTGGGTCATGTTATTTTTCTAGCAA  347
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATAAGAAGAAATGCACAAAATGCCTTGGGTCATGTTATTTTTCTAGCAA  346

seq1  CATACTATCTGTACCAGGGGTCAGTCCTCTGGCAACAGTTAAGGGGTGTA  397
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATACTATCTGTACCAGGGGTCAGTCCTCTGGCAACAGTTAAGGGGTGTA  396

seq1  TGTAAGTCTAGTTTTAAAAAGCAGTCTGACCTCAGTGGAAGAAGATGCAC  447
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTAAGTCTAGTTTTAAAAAGCAGTCTGACCTCAGTGGAAGAAGATGCAC  446

seq1  TTAATCCTGGAGAGACTTGAGGCCCCAGGGAGAGGGGAGGGCTGGTGGGG  497
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAATCCTGGAGAGACTTGAGGCCCCAGGGAGAGGGGAGGGCTGGTGGGG  496

seq1  AGGGGAGCATCCTCTTAGAGACAGTGGGGAGGAAGAATAAGATGAGGAAC  547
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGGGAGCATCCTCTTAGAGACAGTGGGGAGGAAGAATAAGATGAGGAAC  546

seq1  TGTGGGAGAGGGGTCTGAGGGTGCAATGCTGAATTGTTAATTAAGTAAAA  597
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTGGGAGAGGGGTCTGAGGGTGCAATGCTGAATTGTTAATTAAGTAAAA  596

seq1  TAATTATGATGATTTTTAAAAAGCAGTCTGGACCTCTTCTGAGCTCTAGA  647
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAATTATGATGATTTTTAAAAAGCAGTCTGGACCTCTTCTGAGCTCTAGA  646

seq1  GGTGGCAGTCATGGCAACATTAGTAAGAGAAATAAACTAAAGTACACAAA  697
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTGGCAGTCATGGCAACATTAGTAAGAGAAATAAACTAAAGTACACAAA  696

seq1  TAAGGATATGGTCATCAACACTCCTTTTCCTTTTCCTTTCACAGTTTAGA  747
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAGGATATGGTCATCAACACTCCTTTTCCTTTTCCTTTCACAGTTTAGA  746

seq1  GGATTTTATTTATCCCCAAACTTAAATGATTCATTTGAAATTAAAGTGGT  797
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGATTTTATTTATCCCCAAACTTAAATGATTCATTTGAAATTAAAGTGGT  796

seq1  GCATGCAATTAATTAATTATCACCAGGAAGTTCTTCCTTAATCTCCAGAA  847
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCATGCAATTAATTAATTATCACCAGGAAGTTCTTCCTTAATCTCCAGAA  846

seq1  TCAGCAGGATTCCTTCAGGGGAATGCTTCTTAAGCACAGAATAAAATGGA  897
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCAGCAGGATTCCTTCAGGGGAATGCTTCTTAAGCACAGAATAAAATGGA  896

seq1  CTCCCTGACTTCTTCAGAGCCACTGGGATCACTTTAGAATTTAGTCCACT  947
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCCCTGACTTCTTCAGAGCCACTGGGATCACTTTAGAATTTAGTCCACT  946

seq1  TAAAGTGAAGCATCCTCATTATTATAGCTTTAAACAATGCTGGGTTTTTG  997
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAAGTGAAGCATCCTCATTATTATAGCTTTAAACAATGCTGGGTTTTTG  996

seq1  GTTTTGGTTTGTTTTGGATTCCTACCCTAATTCTATGAAAGGAGCTATAT  1047
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTTTGGTTTGTTTTGGATTCCTACCCTAATTCTATGAAAGGAGCTATAT  1046

seq1  AAACCACCAAGAGAATTC  1065
      ||||||||||||||||||
seq2  AAACCACCAAGAGAATTC  1064


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