BAC Information

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BAC

Clone NameB6Ng01-300O16
ChromosomeX (Build37)
Map Location 119,951,071 - 119,951,589
singlet/doubletsinglet
Overlap genenone
Upstream geneEG245575, LOC100039544, Nap1l3
Downstream gene3110007F17Rik, LOC100039751, LOC100039763, LOC665281, EG625591, LOC665325, EG382265
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-300O16.bB6Ng01-300O16.g
ACCGA095367GA095368
length1,0241,168
definitionB6Ng01-300O16.b B6Ng01-300O16.g
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattccctttctccaaatactatccccagctagaacatcttataccaaa
gattactagatggtgaaaatccttaaagcaaaaccacaaaaatcccttca
agaattacaggaaaacacaaataacaggtgatggaattgaacaaaaccat
ctaagatctaaaaatggaagtagacaaaattaagaaaacccaaagggaga
caactatggagatagaaatcctaggaaagaaatcaggaaccagcatcagg
aacagaatacaagagatggaagagaaaatctcaggttcagaagattccat
agaaaacatggacacaacaatctaagaaaatgcaaattgcaaaaagatcc
taactcaaaacatccaggaaatccaggacaaagtgagaagaccaaaccta
aggaaaagacgtacagatgagaatgaagatttttaatttaaagggccagt
aaaaatcttaacaaaattaagaagaaaacttctctaacctaaagaaagag
atgcccatgaacatacaagtagactacagaactccaaagagactgaacca
gaaaagaagttcccccgacacataataatcagaacaacaaatgtactaaa
taaagatagaatattaaaagcagtaagggaaaaaggtcaagtaacatata
aaggaagacctattagaattacaccagatttcacaatacagaccatgaaa
gacagaagtttctggacagatgttatacagaacctaagagaacacaaatg
ccagccaagtctactatacccagcaaaactctcaattaccatagatggaa
gaactaaagtattccatgactataccaaattcacacaatatctttccacg
aattcaacccttcaaaggataattaagggaaaactccaacacaaggaagg
gaaactatgccctagaaaaagcaagaagtaatccttcaacaaccctaaaa
gaagatagccacaagaacagaatcccagctctaacaacaaaaataacagg
aagcaacaattactttttgtaata

gaattctcacctgaggaataccgaatggcagagaagcacctgaaaaaatg
ttcaacatccttaatcatcagggaaatgcaaatcaaaacaaccctgagat
tccacctcacaccagtgagaatggctaagatcaaaaattcaggtgacagc
agatgctggcgaggatgtggagaaagaggaacactcctccattgttggtg
ggattgcaggcttgtacaaccactctggaaatcagtctggcggttcctca
gaaaattggacatagtactaccggaggatccagcaatacctctcctgggc
atatatccagaagaagccccaactggtaagaaggacacatgctccactat
gttcatagcagccttatttataatagccagaaactggaaagaacccagat
gcccctcaacagaggaatggatacagaaaatgtggtacatctacacaatg
gagtactactcagctattaaaaagaatgaatttatgaaattcctagccaa
atggatggacctggagagcatcatcctgagtgaggtaacacaatcacaaa
ggaactcacacaatatgtactcactgataagtggatactagcccaaaacc
taggatacccacgatataagatacaatttcctaaacacatgaaactcaag
aaaaatgaagactgaagtgtggacactatgcccctccttagaagtgggaa
caaaacacccatggaaggagttacagaaacaaagtttggagctgagatga
aaggatggaccatgtagagactgccatatccagggatccaccccataatc
agcatccaaacgctgacaccattgcatatactagcaagattttatcaaaa
ggacccagatgtagctgtctcttgtaagactatgccggggcctagcaaac
acagaagtggatgctcacagtcagctaatggatggatcacagggctccca
tggaggagctagagaagtacccagagctaaagggatctcaaccctatagt
gaacacatatgactaccagtacccctgagctctgactctagctgcatatg
tatcaaagatgcctagtcgcatcactggaaagagagccatgaaccgcgac
ttgtgtgccgatatgcagccagccatggaggaatgctgcatcgcatcgca
tcctcgatcaccactcga
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chrX_119951071_119951589
seq2: B6Ng01-300O16.b_48_566 (reverse)

seq1  CTTGTATGTTCATGGGCATCTCTTTCTTTAGGTTAGAGAAGTTTTCTTCT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTGTATGTTCATGGGCATCTCTTTCTTTAGGTTAGAGAAGTTTTCTTCT  50

seq1  TAATTTTGTTAAGATTTTTACTGGCCCTTTAAATTAAAAATCTTCATTCT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAATTTTGTTAAGATTTTTACTGGCCCTTTAAATTAAAAATCTTCATTCT  100

seq1  CATCTGTACGTCTTTTCCTTAGGTTTGGTCTTCTCACTTTGTCCTGGATT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATCTGTACGTCTTTTCCTTAGGTTTGGTCTTCTCACTTTGTCCTGGATT  150

seq1  TCCTGGATGTTTTGAGTTAGGATCTTTTTGCAATTTGCATTTTCTTAGAT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCTGGATGTTTTGAGTTAGGATCTTTTTGCAATTTGCATTTTCTTAGAT  200

seq1  TGTTGTGTCCATGTTTTCTATGGAATCTTCTGAACCTGAGATTTTCTCTT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTTGTGTCCATGTTTTCTATGGAATCTTCTGAACCTGAGATTTTCTCTT  250

seq1  CCATCTCTTGTATTCTGTTCCTGATGCTGGTTCCTGATTTCTTTCCTAGG  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCATCTCTTGTATTCTGTTCCTGATGCTGGTTCCTGATTTCTTTCCTAGG  300

seq1  ATTTCTATCTCCATAGTTGTCTCCCTTTGGGTTTTCTTAATTTTGTCTAC  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTTCTATCTCCATAGTTGTCTCCCTTTGGGTTTTCTTAATTTTGTCTAC  350

seq1  TTCCATTTTTAGATCTTAGATGGTTTTGTTCAATTCCATCACCTGTTATT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCCATTTTTAGATCTTAGATGGTTTTGTTCAATTCCATCACCTGTTATT  400

seq1  TGTGTTTTCCTGTAATTCTTGAAGGGATTTTTGTGGTTTTGCTTTAAGGA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTGTTTTCCTGTAATTCTTGAAGGGATTTTTGTGGTTTTGCTTTAAGGA  450

seq1  TTTTCACCATCTAGTAATCTTTGGTATAAGATGTTCTAGCTGGGGATAGT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTCACCATCTAGTAATCTTTGGTATAAGATGTTCTAGCTGGGGATAGT  500

seq1  ATTTGGAGAAAGGGAATTC  519
      |||||||||||||||||||
seq2  ATTTGGAGAAAGGGAATTC  519


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