MoG+ -Mouse Genome database with high added value-

BAC Information

BAC name
Region	Chromosome -
Gene	search by nearby gene name.
Format	rows / page	Page	1

BAC

Clone Name	B6Ng01-303C01
Chromosome	X (Build37)	X (Build37)
Map Location	144,598,389 - 144,603,800	144,950,502 - 144,950,636
singlet/doublet	singlet	singlet
Overlap gene	none
Upstream gene	Htr2c, Il13ra2, V1rb10, Lrch2, LOC100039462, LOC666789, LOC434863, EG623995, EG624023, LOC666184, LOC100039511, LOC666812, LOC100039519
Downstream gene	LOC434864, EG624096, LOC100039545, LOC666837, LOC100039553, LOC100034729, LOC666861, EG666864, LOC434866, EG666868, EG624260, LOC434865, EG624310, Ott
Link	Open Mouse BAC browser

Click to get alignment info.

name	Htr2c (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:15560 MGI:96281
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Il13ra2 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:16165 MGI:1277954
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	V1rb10 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:113867 MGI:2148521
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Lrch2 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:210297 MGI:2147870
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	LOC100039462 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:100039462
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 12 Proteins pseudo : _no_value

name	LOC666789 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:666789
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 10 Proteins pseudo : _no_value

name	LOC434863 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:434863
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 10 mRNAs, 17 ESTs, 9 Proteins

name	EG623995 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:623995 MGI:3642951
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 Protein pseudo : _no_value

name	EG624023 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:624023 MGI:3644694
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 2 Proteins

name	LOC666184 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:666184
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 11 mRNAs, 15 ESTs, 4 Proteins

name	LOC100039511 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:100039511
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 9 Proteins pseudo : _no_value

name	LOC666812 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:666812
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 8 Proteins pseudo : _no_value

name	LOC100039519 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:100039519
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 Protein pseudo : _no_value

name	LOC434864 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:434864
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	EG624096 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:624096 MGI:3643280
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 2 Proteins pseudo : _no_value

name	LOC100039545 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:100039545
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 6 mRNAs, 15 ESTs, 2 Proteins pseudo : _no_value

name	LOC666837 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:666837
definition	note : lysyl-tRNA synthetase pseudogene pseudo : _no_value

name	LOC100039553 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:100039553
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 Protein pseudo : _no_value

name	LOC100034729 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:100034729
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	LOC666861 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:666861
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 8 Proteins pseudo : _no_value

name	EG666864 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:666864 MGI:3648921
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 Protein pseudo : _no_value

name	LOC434866 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:434866
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 10 mRNAs, 17 ESTs, 8 Proteins

name	EG666868 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:666868 MGI:3644011
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 8 Proteins pseudo : _no_value

name	EG624260 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:624260 MGI:3646683
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 Protein pseudo : _no_value

name	LOC434865 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:434865
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 11 mRNAs, 16 ESTs, 4 Proteins

name	EG624310 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:624310 MGI:3644796
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 2 Proteins

name	Ott (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:18422 MGI:107573
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Htr2c (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:142373665 GeneID:15560 MGI:96281
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : 5-hydroxytryptamine (serotonin) receptor 2C transcript_id : NM_008312.3

name	Il13ra2 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:142345552 GeneID:16165 MGI:1277954
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : interleukin 13 receptor, alpha 2 transcript_id : NM_008356.2

name	V1rb10 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:118200340 GeneID:113867 MGI:2148521
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : vomeronasal 1 receptor, B10 transcript_id : NM_053240.2

name	Lrch2 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:124487174 GeneID:210297 MGI:2147870
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : leucine-rich repeats and calponin homology (CH) domain containing 2 transcript_id : NM_001081173.1

name	LOC434863 (CDS detail)
type	mRNA
link	vega ensembl NCBI
xref	GI:94408343 GeneID:434863
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 5 mRNAs, 17 ESTs, 5 Proteins product : ovary testis transcribed-like, transcript variant 1 transcript_id : XM_486785.3

name	LOC434863 (CDS detail)
type	mRNA
link	vega ensembl NCBI
xref	GI:149272432 GeneID:434863
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 2 mRNAs, 17 ESTs, 1 Protein product : ovary testis transcribed-like, transcript variant 3 transcript_id : XM_897719.3

name	LOC434863 (CDS detail)
type	mRNA
link	vega ensembl NCBI
xref	GI:149272434 GeneID:434863
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 3 mRNAs, 16 ESTs, 5 Proteins product : ovary testis transcribed-like transcript_id : XM_001473108.1

name	EG624023 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:149272425 GeneID:624023 MGI:3644694
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 2 Proteins product : predicted gene, EG624023 transcript_id : XM_888549.3

name	LOC666184 (CDS detail)
type	mRNA
link	vega ensembl NCBI
xref	GI:94408346 GeneID:666184
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 7 mRNAs, 15 ESTs, 2 Proteins product : ovary testis transcribed-like, transcript variant 4 transcript_id : XM_982169.1

name	LOC666184 (CDS detail)
type	mRNA
link	vega ensembl NCBI
xref	GI:94408350 GeneID:666184
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 4 mRNAs, 15 ESTs, 2 Proteins product : ovary testis transcribed-like, transcript variant 2 transcript_id : XM_982089.1

name	LOC434864 (CDS detail)
type	mRNA
link	vega ensembl NCBI
xref	GI:126032330 GeneID:434864
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : ovary testis transcribed-like transcript_id : NM_001081648.1

name	LOC100034729 (CDS detail)
type	mRNA
link	vega ensembl NCBI
xref	GI:131887312 GeneID:100034729
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : ovary testis transcribed-like transcript_id : NM_001082966.1

name	LOC434866 (CDS detail)
type	mRNA
link	vega ensembl NCBI
xref	GI:149272441 GeneID:434866
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 6 mRNAs, 16 ESTs, 2 Proteins product : novel protein similar to ovary testis transcribed (Ott), transcript variant 1 transcript_id : XM_001487784.1

name	LOC434866 (CDS detail)
type	mRNA
link	vega ensembl NCBI
xref	GI:149272443 GeneID:434866
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 2 mRNAs, 16 ESTs, 1 Protein product : novel protein similar to ovary testis transcribed (Ott), transcript variant 3 transcript_id : XM_001487786.1

name	LOC434866 (CDS detail)
type	mRNA
link	vega ensembl NCBI
xref	GI:149272445 GeneID:434866
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 4 mRNAs, 16 ESTs, 2 Proteins product : novel protein similar to ovary testis transcribed (Ott), transcript variant 4 transcript_id : XM_001487787.1

name	LOC434866 (CDS detail)
type	mRNA
link	vega ensembl NCBI
xref	GI:149272447 GeneID:434866
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 2 mRNAs, 17 ESTs, 4 Proteins product : novel protein similar to ovary testis transcribed (Ott), transcript variant 2 transcript_id : XM_001487785.1

name	LOC434866 (CDS detail)
type	mRNA
link	vega ensembl NCBI
xref	GI:149272451 GeneID:434866
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 2 mRNAs, 17 ESTs, 4 Proteins product : novel protein similar to ovary testis transcribed (Ott), transcript variant 5 transcript_id : XM_001487788.1

name	LOC434866 (CDS detail)
type	mRNA
link	vega ensembl NCBI
xref	GI:149272449 GeneID:434866
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 mRNA, 17 ESTs, 1 Protein product : novel protein similar to ovary testis transcribed (Ott), transcript variant 6 transcript_id : XM_001487789.1

name	LOC434865 (CDS detail)
type	mRNA
link	vega ensembl NCBI
xref	GI:94408362 GeneID:434865
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 7 mRNAs, 16 ESTs, 2 Proteins product : novel protein similar to ovary testis transcribed (Ott), transcript variant 1 transcript_id : XM_486789.4

name	LOC434865 (CDS detail)
type	mRNA
link	vega ensembl NCBI
xref	GI:94408364 GeneID:434865
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 4 mRNAs, 16 ESTs, 2 Proteins product : novel protein similar to ovary testis transcribed (Ott), transcript variant 4 transcript_id : XM_897890.2

name	EG624310 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:149272430 GeneID:624310 MGI:3644796
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 2 Proteins product : predicted gene, EG624310 transcript_id : XM_888852.2

name	Ott (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:33859585 GeneID:18422 MGI:107573
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : ovary testis transcribed transcript_id : NM_011022.1

name	Htr2c (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:31542977 CCDS:CCDS30459.1 GeneID:15560 MGI:96281
definition	GO_component : GO:0009897 - external side of plasma membrane [Evidence ISS]; GO:0016021 - integral to membrane [Evidence IEA]; GO:0016020 - membrane [Evidence IEA] GO_function : GO:0004930 - G-protein coupled receptor activity [Evidence IEA]; GO:0004872 - receptor activity [Evidence IEA]; GO:0001584 - rhodopsin-like receptor activity [Evidence IEA]; GO:0004993 - serotonin receptor activity [Evidence ISS]; GO:0004871 - signal transducer activity [Evidence IEA] GO_process : GO:0007186 - G-protein coupled receptor protein signaling pathway [Evidence IEA]; GO:0048016 - inositol phosphate-mediated signaling [Evidence ISS]; GO:0007165 - signal transduction [Evidence IEA] codon_start : 1 exception : mismatches in translation note : 5-HT2C receptor; snoRNA MBI-36 product : 5-hydroxytryptamine (serotonin) receptor 2C protein_id : NP_032338.2

name	Il13ra2 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:6680405 CCDS:CCDS30460.1 GeneID:16165 MGI:1277954
definition	GO_component : GO:0005887 - integral to plasma membrane [Evidence IEA] GO_function : GO:0004907 - interleukin receptor activity [Evidence IEA]; GO:0004872 - receptor activity [Evidence IEA] GO_process : GO:0007166 - cell surface receptor linked signal transduction [Evidence IEA] codon_start : 1 product : interleukin 13 receptor, alpha 2 protein_id : NP_032382.1

name	V1rb10 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:118200341 GeneID:113867 MGI:2148521
definition	GO_component : GO:0016021 - integral to membrane [Evidence IEA]; GO:0016020 - membrane [Evidence IEA] GO_function : GO:0004930 - G-protein coupled receptor activity [Evidence IEA]; GO:0016503 - pheromone receptor activity [Evidence IEA]; GO:0004872 - receptor activity [Evidence IEA] [Evidence ISS]; GO:0001584 - rhodopsin-like receptor activity [Evidence IEA]; GO:0004871 - signal transducer activity [Evidence IEA] GO_process : GO:0007186 - G-protein coupled receptor protein signaling pathway [Evidence IEA]; GO:0019236 - response to pheromone [Evidence IEA]; GO:0007606 - sensory perception of chemical stimulus [Evidence TAS]; GO:0007165 - signal transduction [Evidence IEA] codon_start : 1 product : vomeronasal 1 receptor, B10 protein_id : NP_444470.2

name	Lrch2 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:124487175 GeneID:210297 MGI:2147870
definition	GO_function : GO:0016740 - transferase activity [Evidence IEA] codon_start : 1 product : leucine-rich repeats and calponin homology (CH) domain containing 2 protein_id : NP_001074642.1

name	LOC434863 (CDS detail)
type	CDS
link	vega ensembl NCBI
xref	GI:51772467 GeneID:434863
definition	codon_start : 1 product : hypothetical protein LOC434863 isoform 1 protein_id : XP_486785.1

name	LOC434863 (CDS detail)
type	CDS
link	vega ensembl NCBI
xref	GI:149272433 GeneID:434863
definition	codon_start : 1 product : hypothetical protein LOC434863 isoform 3 protein_id : XP_902812.3

name	LOC434863 (CDS detail)
type	CDS
link	vega ensembl NCBI
xref	GI:149272435 GeneID:434863
definition	codon_start : 1 product : hypothetical protein LOC434863 protein_id : XP_001473158.1

name	EG624023 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:149272426 GeneID:624023 MGI:3644694
definition	codon_start : 1 product : similar to AU022751 protein protein_id : XP_893642.3

name	LOC666184 (CDS detail)
type	CDS
link	vega ensembl NCBI
xref	GI:94408347 GeneID:666184
definition	codon_start : 1 product : hypothetical protein LOC666184 isoform 4 protein_id : XP_987263.1

name	LOC666184 (CDS detail)
type	CDS
link	vega ensembl NCBI
xref	GI:94408351 GeneID:666184
definition	codon_start : 1 product : hypothetical protein LOC666184 isoform 2 protein_id : XP_987183.1

name	LOC434864 (CDS detail)
type	CDS
link	vega ensembl NCBI
xref	GI:126032331 GeneID:434864
definition	codon_start : 1 product : hypothetical protein LOC434864 protein_id : NP_001075117.1

name	LOC100034729 (CDS detail)
type	CDS
link	vega ensembl NCBI
xref	GI:131887313 GeneID:100034729
definition	codon_start : 1 product : hypothetical protein LOC100034729 protein_id : NP_001076435.1

name	LOC434866 (CDS detail)
type	CDS
link	vega ensembl NCBI
xref	GI:149272442 GeneID:434866
definition	codon_start : 1 product : hypothetical protein isoform 1 protein_id : XP_001487834.1

name	LOC434866 (CDS detail)
type	CDS
link	vega ensembl NCBI
xref	GI:149272446 GeneID:434866
definition	codon_start : 1 product : hypothetical protein isoform 4 protein_id : XP_001487837.1

name	LOC434866 (CDS detail)
type	CDS
link	vega ensembl NCBI
xref	GI:149272444 GeneID:434866
definition	codon_start : 1 product : hypothetical protein isoform 3 protein_id : XP_001487836.1

name	LOC434866 (CDS detail)
type	CDS
link	vega ensembl NCBI
xref	GI:149272448 GeneID:434866
definition	codon_start : 1 product : hypothetical protein isoform 2 protein_id : XP_001487835.1

name	LOC434866 (CDS detail)
type	CDS
link	vega ensembl NCBI
xref	GI:149272452 GeneID:434866
definition	codon_start : 1 product : hypothetical protein isoform 5 protein_id : XP_001487838.1

name	LOC434866 (CDS detail)
type	CDS
link	vega ensembl NCBI
xref	GI:149272450 GeneID:434866
definition	codon_start : 1 product : hypothetical protein isoform 6 protein_id : XP_001487839.1

name	LOC434865 (CDS detail)
type	CDS
link	vega ensembl NCBI
xref	GI:51772471 GeneID:434865
definition	codon_start : 1 product : hypothetical protein LOC434865 isoform 1 protein_id : XP_486789.1

name	LOC434865 (CDS detail)
type	CDS
link	vega ensembl NCBI
xref	GI:94408365 GeneID:434865
definition	codon_start : 1 product : hypothetical protein LOC434865 isoform 4 protein_id : XP_902983.2

name	EG624310 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:149272431 GeneID:624310 MGI:3644796
definition	codon_start : 1 product : similar to AU022751 protein protein_id : XP_893945.2

name	Ott (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:33859586 GeneID:18422 MGI:107573
definition	codon_start : 1 product : ovary testis transcribed protein_id : NP_035152.1

name	LOC100039462 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:100039462
definition	number : 1 pseudo : _no_value

name	LOC100039462 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:100039462
definition	number : 2 pseudo : _no_value

name	LOC100039462 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:100039462
definition	number : 3 pseudo : _no_value

name	LOC100039462 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:100039462
definition	number : 4 pseudo : _no_value

name	LOC100039462 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:100039462
definition	number : 5 pseudo : _no_value

name	LOC100039462 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:100039462
definition	number : 6 pseudo : _no_value

name	LOC666789 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:666789
definition	number : 1 pseudo : _no_value

name	LOC666789 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:666789
definition	number : 2 pseudo : _no_value

name	LOC666789 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:666789
definition	number : 3 pseudo : _no_value

name	LOC666789 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:666789
definition	number : 4 pseudo : _no_value

name	LOC666789 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:666789
definition	number : 5 pseudo : _no_value

name	LOC666789 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:666789
definition	number : 6 pseudo : _no_value

name	LOC666789 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:666789
definition	number : 7 pseudo : _no_value

name	EG623995 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:623995
definition	number : 2 pseudo : _no_value

name	EG623995 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:623995
definition	number : 1 pseudo : _no_value

name	LOC100039511 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:100039511
definition	number : 1 pseudo : _no_value

name	LOC100039511 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:100039511
definition	number : 2 pseudo : _no_value

name	LOC100039511 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:100039511
definition	number : 3 pseudo : _no_value

name	LOC100039511 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:100039511
definition	number : 4 pseudo : _no_value

name	LOC666812 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:666812
definition	number : 1 pseudo : _no_value

name	LOC100039519 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:100039519
definition	number : 2 pseudo : _no_value

name	LOC100039519 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:100039519
definition	number : 1 pseudo : _no_value

name	EG624096 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:624096
definition	number : 2 pseudo : _no_value

name	EG624096 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:624096
definition	number : 1 pseudo : _no_value

name	LOC100039553 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:100039553
definition	number : 2 pseudo : _no_value

name	LOC100039553 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:100039553
definition	number : 1 pseudo : _no_value

name	LOC666861 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:666861
definition	number : 1 pseudo : _no_value

name	EG666864 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:666864
definition	number : 2 pseudo : _no_value

name	EG666864 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:666864
definition	number : 1 pseudo : _no_value

name	EG666868 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:666868
definition	number : 1 pseudo : _no_value

name	EG624260 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:624260
definition	number : 2 pseudo : _no_value

name	EG624260 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:624260
definition	number : 1 pseudo : _no_value

name	LOC100039545 (CDS detail)
type	misc_RNA
link	vega ensembl NCBI
xref	GI:149272427 GeneID:100039545
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 6 mRNAs, 15 ESTs, 2 Proteins product : similar to Ott protein pseudo : _no_value transcript_id : XR_031018.1

clone name	MSMg01-103J02
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-366B07
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-376L16
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-134J14
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-195B06
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-376D15
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-531F24
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-119B18
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-539E01
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-319O11
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-080M22
singlet/doublet	singlet
plural/unique	plural

clone name	MSMg01-209C17
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-414M11
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-175M06
singlet/doublet	singlet
plural/unique	plural

clone name	MSMg01-090H04
singlet/doublet	singlet
plural/unique	plural

clone name	MSMg01-081E04
singlet/doublet	singlet
plural/unique	plural

clone name	MSMg01-328P16
singlet/doublet	singlet
plural/unique	plural

clone name	MSMg01-350H24
singlet/doublet	singlet
plural/unique	plural

clone name	MSMg01-356A02
singlet/doublet	singlet
plural/unique	plural

clone name	MSMg01-361E24
singlet/doublet	singlet
plural/unique	plural

clone name	MSMg01-416F21
singlet/doublet	singlet
plural/unique	plural

clone name	MSMg01-346B20
singlet/doublet	singlet
plural/unique	plural

clone name	MSMg01-506I17
singlet/doublet	singlet
plural/unique	plural

clone name	MSMg01-527N13
singlet/doublet	singlet
plural/unique	plural

clone name	MSMg01-509F07
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-175L02
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-512H21
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-348E02
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-269G19
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-048L03
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-462E10
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-327K12
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-047B23
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-047C24
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-263F13
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-351G12
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-137J15
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-187E10
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-276M05
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-277B12
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-235H01
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-258H19
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-042K12
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-026H01
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-218O06
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-234F19
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-161M23
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-329I24
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-232D10
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-138L15
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-261G07
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-271K15
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-253E10
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-144O21
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-291K17
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-256G05
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-206I04
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-171J21
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-073K03
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-008C20
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-060K23
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-240B17
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-163C13
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-080K12
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-100C23
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-218J17
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-146H24
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-148B17
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-232E09
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-100M20
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-157J10
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-167E14
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-066J04
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-295K11
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-006M14
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-084F24
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-203B22
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-226I09
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-303C01
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-291P10
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-319C09
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-178H08
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-140B10
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-308G13
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-146F03
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-192K22
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-076K01
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-282G17
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-163D19
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-015C18
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-044B20
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-261N11
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-303C01
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-130F13
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-276G09
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-331P24
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-160E03
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-309L12
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-047E08
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-314E21
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-262I24
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-115F21
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-109K12
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-046P03
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-046P03
singlet/doublet	singlet
plural/unique	unique

BAC End Information

BAC end	BAC-end 1	BAC-end 2
end name	B6Ng01-303C01.b	B6Ng01-303C01.g
ACC	GA097004	GA097005
length	1,172	135
definition	B6Ng01-303C01.b	B6Ng01-303C01.g
singlet/doublet	singlet	singlet
BLAST hit	unique	unique
Map location.	(144,598,389 - 144,603,800)	(144,950,502 - 144,950,636)
sequence	gaattcaggctcagtgaatactggattttaggacaggcctttgaccaaag tattgtttcaagacaggttgccccttcactctgtagcttcatataaaaaa ttaagaggtaaataaacgaagcaatgaacacacaaacacataaacaaatg cagcacaatttcaactgaaaggtcagaaaatggtaatagggtaagtgttc tttgctcccaaactctcaatgtaccaatgaaagatgcataaattacgtga aatgtgtaacctgaaagtaagaatgcttttccccccaacaactggtccct tgattttctgtgtacccagcttgatgtcttgttggctggattagaaatca aaatgggaataattttcctggctttgttttctctctcaaaagaactggag acatataacagctgttaaactctttccttagatgccttaggacctgaatt agatgcccagattccctgcagaaaccacacactcaaggaccagtgaaatg gctcagtgagtcactgtagttgctcccttactgggcaacctatgatggat ccctaggaatggcattttgaaaataatgaagaaactccttcaccttatgc actaatccacacatatatgcaccatagcatgccacatgacatctgaatca atcacaaaagaaacaatatatggaaataatatgtggagcatcatgattta taacagtattccctcatgtgggaaggcagagctcagagaatccctgggat attgtagtggacacctaccctggcctgactgctaagccccaggtccctat tagagactgatctcagcagacatgaggaggattcctgatgaacaagtgtc agtggtaacagtaagcgtccacatggaaatagagaaacctaacagcactc ctacacacacatgtgcacctgttcacatactaacagaagcacacagagat gtagccataccttcaccatcatacacacacacacagagattctggcagag aagaaagaaaaattaggtttattttgcacagtgagcatgtaattatttcc tcacctcttgctcctggatcatttttagaacctcaacctggtttgtctgc tccctccaagaggcagtcaatgtacgttagtaacctggaattcctgtggg ctccagatagaactacaatccg	actctgtaggccagcctggctatgaattcaaagatatgcctgtctctacc tcccatgtgcttgggttaaaggcatgtactaccactacagcttggtggta tattgaggaaggaaggaaggaaggaaggagggagg
quality values	Open. Hide. 41 22 19 35 54 25 15 52 58 52 58 37 25 62 62 62 47 42 42 49 54 62 62 62 22 29 62 62 54 47 62 62 47 51 39 27 38 32 56 56 56 62 62 59 59 44 39 62 62 62 62 62 59 62 62 62 62 62 59 46 59 62 59 62 62 62 62 62 62 62 62 62 62 62 62 62 59 59 59 62 62 62 62 59 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 59 59 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 59 35 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 59 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 54 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 54 54 49 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 49 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 54 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 49 62 62 62 62 62 62 62 62 62 62 58 58 54 58 58 58 46 58 58 58 52 58 58 58 45 58 58 58 58 52 58 58 58 58 58 58 58 58 58 54 54 58 58 58 58 58 58 58 58 54 58 58 58 58 58 54 49 58 58 58 54 58 58 58 58 58 45 58 58 49 42 58 58 52 54 58 58 58 58 58 58 58 58 58 52 58 58 51 58 58 58 47 58 58 51 51 58 58 58 58 58 58 50 49 58 58 46 53 54 58 49 51 51 51 47 58 58 58 45 39 53 53 58 49 58 52 58 53 58 58 58 39 51 58 53 58 54 52 49 49 58 58 52 58 53 54 51 54 58 41 42 50 58 58 58 58 58 33 44 47 50 58 51 58 52 53 52 58 58 58 53 58 58 50 50 50 49 51 52 52 53 51 58 48 44 58 50 49 51 52 52 52 41 58 53 58 51 58 50 52 50 50 53 39 49 51 32 28 58 52 40 52 49 54 50 47 49 52 39 49 53 58 58 44 49 53 39 52 51 52 54 54 44 50 33 19 42 23 49 39 46 23 51 52 52 38 18 33 26 54 25 32 37 54 54 47 44 54 54 33 24 39 39 38 54 31 53 39 42 54 29 42 24 45 45 44 45 37 33 54 54 33 51 42 37 52 30 38 33 33 39 52 42 45 40 35 23 39 54 54 51 33 13 49 33 32 54 32 36 40 30 23 34 32 47 32 45 29 40 53 29 32 34 45 31 31 29 52 32 25 41 21 23 32 32 31 9 51 41 21 42 21 12 34 31 40 27 30 37 24 31 31 33 31 31 31 29 31 45 31 38 34 39 26 19 24 24 33 33 32 29 30 31 31 36 31 45 27 38 33 37 32 31 26 31 31 35 30 46 31 31 21 29 42 24 32 47 33 31 35 32 32 32 31 28 31 32 26 31 38 32 34 25 31 37 18 29 21 31 29 26 16 23 36 31 36 31 20 30 39 31 32 24 24 25 19 27 26 38 33 43 32 27 30 29 24 26 30 30 20 32 23 31 23 33 29 19 21 12 15 20 31 23 29 19 25 19 16 31 29 24 24 21 29 17 14 17 19 20 34 34 30 31 31 32 27 34 27 29 22 29 20 32 21 14 15 9 20 13 29 25 17 32 14 19 21 24 27 9 30 10 26 29 10 27 24 7 9 30 47 47 47 32 13 25 12 13 9 15 8 7 10 8 40 27 11 21 27 11 26 11 6 6 21 10 10 29 13 16 27 13 9 8 27 16 6 5 13 15 9 13 11 10 8 6 9 11 18 10 27 28 20 6 4 3 3 4 21 4 9 19 24 28 40 47 16 4 3 9 13 15 20 18 7 4 6 5 4 13 6 16 6 8 25 15 5 3 3 2 8 6 5 4 20 8 20 9 21 14 4 4 14 4 6 3 5 10 10 7 17 19 5 14 13 17 14 6 7 7 23 5 6 18 19 7 9 4 5 6 4 2 5 6 2 1 3 2 5 7 21 16 4 4 7 6 6 5 5 2 4 8 7 6 10 14 11 7 4 7 6 18 16 6	Open. Hide. 30 59 62 62 59 43 34 34 23 38 30 23 20 26 41 62 59 62 62 62 62 56 59 62 62 59 59 62 59 49 62 59 59 49 43 49 59 54 54 62 59 59 62 62 62 62 62 62 62 62 62 62 62 59 49 62 62 62 59 62 62 62 62 62 59 59 62 62 62 62 62 59 59 62 59 59 62 62 62 62 62 62 59 62 62 62 62 62 59 62 62 62 62 62 43 54 62 47 51 62 62 62 49 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 50 22 15

Alignment Information

BAC End 1

BAC End 2

seq1: chrX_144598389_144603800
seq2: B6Ng01-303C01.b_45_1216 (reverse)

seq1  CGGATTGTAGTCTATTCCTGAGCCACAGAGAAAATCAGTTACTACGTACA  50
                                                        
seq2  --------------------------------------------------  0

seq1  TTTGACTGGCCTCTTGGAGAAACAGGAGCAAACAGTTTGAGGTCTAAAAT  100
                                                        
seq2  --------------------------------------------------  0

seq1  GATCCCAGAGCAAGAGGATGAGGAATAATTACATGCTCACTGTGCAAATA  150
                                                        
seq2  --------------------------------------------------  0

seq1  ACCTAATTTTTCTTTTCTTCTCTGCCAGAATCTCTTGTGTGTGTGTGTGT  200
                                                        
seq2  --------------------------------------------------  0

seq1  ATGATGGTGAAGGTGTTGCTACATCTCTGTGTGCTTCTGTTAGTATGTGA  250
                                                        
seq2  --------------------------------------------------  0

seq1  ACAGGTGCCCATGTGTGTGTAGGATTGCTGTTAGGTTTGTCCTCTTCCAT  300
                                                        
seq2  --------------------------------------------------  0

seq1  GTGGATGCTCTCTGTTACCACTGACACTTGTTCATCAGGAATCTTCCTCA  350
                                                        
seq2  --------------------------------------------------  0

seq1  TGTCTGCTGAGATCAGTCTCTAATAGGGACCTGGGGCTTAGCAGTCAGGC  400
                                                        
seq2  --------------------------------------------------  0

seq1  CAGGGTAGTTGTCCACTACAATATCCCAGGGATTCTCTGAGCTCTGCCTT  450
                                                        
seq2  --------------------------------------------------  0

seq1  CCCACATGAGGGAATACTGTTATAAATCATGATGCTCCACATATTATTTC  500
                                                        
seq2  --------------------------------------------------  0

seq1  CATATATTGTTTCTTTTGTGATTGATTCAGATGTCATGTGGCATGCTATG  550
                                                        
seq2  --------------------------------------------------  0

seq1  GTGCATATATGTGTGGATTAGCGCATAAGGTGAAGGAGTTTCTTCATTAT  600
                                                        
seq2  --------------------------------------------------  0

seq1  TTTCAAAATGCCATTCCCAGGGATCCAACAAATGTTGCCCAGTAAAGGAG  650
                                                        
seq2  --------------------------------------------------  0

seq1  CAACTACAGTGACTCACTGATCCATTTCACTGGTCCTTGAGTGTGTGGTT  700
                                                        
seq2  --------------------------------------------------  0

seq1  CCTGCAGGGAATCTGAGCATCTAATTCAGGTCCTAAGGCCTCCATGGAAA  750
                                                        
seq2  --------------------------------------------------  0

seq1  GAGTTTAACTGCTGCTATATGTCTCCAGTTTGTTTAACAGACAAAAAAAA  800
                                                        
seq2  --------------------------------------------------  0

seq1  GACAGGCTCTTTTAACAAAAAAAAAAGCAAGACAGGAATATTATTCCCAT  850
                                                        
seq2  --------------------------------------------------  0

seq1  TCTGATTTCTAATCCAGACAACAAGATATTAAGCTGCGTACCCAGAAAAT  900
                                                        
seq2  --------------------------------------------------  0

seq1  CATGTAAACAGTTGTTGGGGAGAAAAGCATTCTTTCTTTCAGGTTATACA  950
                                                        
seq2  --------------------------------------------------  0

seq1  TTTCAAATAACATATGCATCTATCATCAGTACATTTGGAGTTTGGGAGCA  1000
                                                        
seq2  --------------------------------------------------  0

seq1  AAGAAAACTCATCCTATTACTATTTTCTGACATTTCAGTTGATATTGTGC  1050
                                                        
seq2  --------------------------------------------------  0

seq1  TGCATTTGTTTGTGTTTGTGTGTTCACTACCTTATTTATATACCTCTTGA  1100
                                                        
seq2  --------------------------------------------------  0

seq1  TTTTTTTCCGTGAAACTTCATAGTGTAGGGGCAACCTGTCTTGAAACAAT  1150
                                                        
seq2  --------------------------------------------------  0

seq1  ATTGTGGTCAAAGGTCTGTACTAAAATCCAGTATTCACTGAGCTGGCAAT  1200
                                                        
seq2  --------------------------------------------------  0

seq1  CCAATGCAATCCTTCTGCTTCTGCAGTTTAAGACATGAAATTGTAGATAT  1250
                                                        
seq2  --------------------------------------------------  0

seq1  AAACTGTCAGGTGATGCTCATTCAGCGATGTGATAATTTCATTTGTTTGG  1300
                                                        
seq2  --------------------------------------------------  0

seq1  TATGATTTTTAAGAAAGTGTTTCCTATAAAGCCTGCTGGCTAGAGACACC  1350
                                                        
seq2  --------------------------------------------------  0

seq1  CATTGTGGCTGAGGGTGACAGCAAATTCCCCATTCTTCTGCTTCTAACAG  1400
                                                        
seq2  --------------------------------------------------  0

seq1  TGCTGGGATTTTGCATAAACACTGTCCTACCTGGAGTATTCTTCTAAAGA  1450
                                                        
seq2  --------------------------------------------------  0

seq1  GACAAACTGTTTTTAAAAACTTCAATTCCAGGCTCATGTAATACACTGGA  1500
                                                        
seq2  --------------------------------------------------  0

seq1  ACATTAATTTGACTGCTGGCTAAGCTGAGTTCTGGGATATAGTGAATGCT  1550
                                                        
seq2  --------------------------------------------------  0

seq1  TGCAAGCATGAGAATCTGAGTTTGATGCCCAGGATAATGGACTGGAAACC  1600
                                                        
seq2  --------------------------------------------------  0

seq1  TAATAATATCCTTGAATATGTGTAGGTAAGCAAATGTAATGAGACTAGGT  1650
                                                        
seq2  --------------------------------------------------  0

seq1  CAAGAAGATAAGAGTTATTTACATGGAAACTTCAGCTACAGCAAAAGTTC  1700
                                                        
seq2  --------------------------------------------------  0

seq1  TGGACCAGACAGGAATATATCAGAAATGTAGATAAAACATGTACTTCAAA  1750
                                                        
seq2  --------------------------------------------------  0

seq1  TTTATAATTTACTTCCAATTTGAATGGGAAGAATATTTAAGTTTACATAT  1800
                                                        
seq2  --------------------------------------------------  0

seq1  TCTTTCAGATTTGGTCTTAATTACACTTTCCAATTATAAAACCATAGACT  1850
                                                        
seq2  --------------------------------------------------  0

seq1  GGTTTCTATACTCCTTTAGAGTCATATTCTATTTTTTGTCACCTCTGACA  1900
                                                        
seq2  --------------------------------------------------  0

seq1  CCATATAGTTAAGAACATTGGGTCGGCTGTTTCCTCAAACAACACGGATT  1950
                                                        
seq2  --------------------------------------------------  0

seq1  CATTCCCAGTACATGGCACATAACCATCGATTCCATGAGAATCGAACCCT  2000
                                                        
seq2  --------------------------------------------------  0

seq1  CTTCTGGACTGCACAGGCATCAGGCACACTCTTGAGTCACAGGCAACATG  2050
                                                        
seq2  --------------------------------------------------  0

seq1  GAGGCAAAATAACTAAAAAGATGTACTGAGAAATCAAAATGAAAAGAAAT  2100
                                                        
seq2  --------------------------------------------------  0

seq1  AAAACAAATTGAAATTAGTGTGAACAGAATTATTTAGAGCCTGTTAGAAA  2150
                                                        
seq2  --------------------------------------------------  0

seq1  TGATCAGTATTTCCCTACTATACAACAGAGAATACATTTAAGGAGATGGT  2200
                                                        
seq2  --------------------------------------------------  0

seq1  AGAAAAGCATGTGGCATGATGAAATTCTTCCAGGTTTTCTGGAGCAGAGT  2250
                                                        
seq2  --------------------------------------------------  0

seq1  ATCAGGCATGTGAAGATAGCTGCTTTCCCTGCTCCTCACTTGGGATTGGA  2300
                                                        
seq2  --------------------------------------------------  0

seq1  GGCGTGGTGTGGCCTGGCATAGGCTGAACTCTGGCCACTGAGCCTCTGCA  2350
                                                        
seq2  --------------------------------------------------  0

seq1  ACAGTGCAGAAAGCATAGTGATTGGCGGACGCCTTTAGGAAAGTGTTGAG  2400
                                                        
seq2  --------------------------------------------------  0

seq1  AGCCTCAGGCTCATCCAGGGAAGACACACCTCTGCAAGTGGATCTCTGTG  2450
                                                        
seq2  --------------------------------------------------  0

seq1  TTTTGAGGTGGCTGGGACTCCCACAGGAGGTGGCAACATGATGGCGAACC  2500
                                                        
seq2  --------------------------------------------------  0

seq1  TTGAGGTAACCAGTTCTCTCTAGTTTGAGAATAGCAGAGTGACCCCTCTC  2550
                                                        
seq2  --------------------------------------------------  0

seq1  CCTGCTCAGGGTTCCCACTGGTCAGAAAAGGATGTTGACTGGGAGACCTC  2600
                                                        
seq2  --------------------------------------------------  0

seq1  TGCATAATCCTGCTGTTCAAAATCATGCCTAGAGGTGTGGAGATTTCCAG  2650
                                                        
seq2  --------------------------------------------------  0

seq1  AGAGGGCTCGGGCTCTGTCTCTCCTGGCTTCCTAATTCGAGGAGCAAATT  2700
                                                        
seq2  --------------------------------------------------  0

seq1  TAACCTTTCTAGCGCAGTGCCCCTCTATCCCATCAACCCCTCTATTCTAG  2750
                                                        
seq2  --------------------------------------------------  0

seq1  AAGAGAAACTTTAAACATCCTGGCGTTTAGTGGTTATTGGATTCTGTGAC  2800
                                                        
seq2  --------------------------------------------------  0

seq1  AGTAAAATGGCACTTAGTTTTGAGTCAGGACAGGGGGCTTACAGAGTTTC  2850
                                                        
seq2  --------------------------------------------------  0

seq1  CACCTCCAGCATCAAATAGCTGGACCCTAGGATTAGCCTTCTAGGAATCT  2900
                                                        
seq2  --------------------------------------------------  0

seq1  GGGAATTACAATGCCAGAAAGGTATACCTTCCATTTTTTTTTTTAGTGGT  2950
                                                        
seq2  --------------------------------------------------  0

seq1  GGGTGGGGGTGCCTGAGAGAGTGTGTGGTGGGCTTCATTTCTAAATTTAG  3000
                                                        
seq2  --------------------------------------------------  0

seq1  GGATAGCTTTCCAGGGCTGTTCAAATTACAGCGGTAGAAAAAATAGAGCA  3050
                                                        
seq2  --------------------------------------------------  0

seq1  TGAATATTTGTTCAATGGGTTTCTTTGATTGCTTGTATAAATCAGTATTG  3100
                                                        
seq2  --------------------------------------------------  0

seq1  TCCCAAAACTAGATATATACTGCAATAATTCCACAAGCCACAGCTTAATC  3150
                                                        
seq2  --------------------------------------------------  0

seq1  CTGCTGCCCTTCCCTGCCCAGGCCTTTCCTTCTTTCACTCCCTAAACATT  3200
                                                        
seq2  --------------------------------------------------  0

seq1  CCTTGGCTATGCACTAAGCAGCACTTTGTTAGCATTAACAAGGGCTTCAA  3250
                                                        
seq2  --------------------------------------------------  0

seq1  AGTAACAGAGTAAATGGGTGTGTGTGTGTGTGAGTGTGTGTGTGTGTGTG  3300
                                                        
seq2  --------------------------------------------------  0

seq1  TGTGTGTGTGTATCTGTGTGCCTTGTGTGTCTTTGTCTGTGTATTCTGTG  3350
                                                        
seq2  --------------------------------------------------  0

seq1  TGTATGTGGTTGTGTGTCTTTGTGTGTTTGAAATTGTGTATCCTGGTATG  3400
                                                        
seq2  --------------------------------------------------  0

seq1  TTTCTGTTTGGGTGAATCTGTCTGTGAGAGTATGAATGTGAGCATGGCAT  3450
                                                        
seq2  --------------------------------------------------  0

seq1  AAAATATTTACAAGTTACATATGCTGCAGGAACAAGAGTGTCTGCACACT  3500
                                                        
seq2  --------------------------------------------------  0

seq1  GGTGAGAAGGGAGTAAGTGACTGGAAACACAGAATTAAGAATACAGTCAG  3550
                                                        
seq2  --------------------------------------------------  0

seq1  ATCCAGAGCTAGAAACCGGAAGACACATAAGGAGTGAAAGAAATGGGGAG  3600
                                                        
seq2  --------------------------------------------------  0

seq1  AAGATGCAGGGCATGGTAGCACATGACTTGAGTCTTAGCAGTGGTGAGGC  3650
                                                        
seq2  --------------------------------------------------  0

seq1  AGAACAAGTGCATATTTGTGGATGTGAGCCCAGACTGAGCTGTCAGACAG  3700
                                                        
seq2  --------------------------------------------------  0

seq1  ACAGACCCTTTCTCCTAAAAGAAAAACAAAGATTAAAAATGAAGTGGTAT  3750
                                                        
seq2  --------------------------------------------------  0

seq1  AGAGGATTCCTATTAGAGAAAACAGAATCAGTACAGGCATGAGAAAAGAA  3800
                                                        
seq2  --------------------------------------------------  0

seq1  GGTCTGACTAGAGTCTGACAAACAGCAGGTAATCTTGTCTCCAAAGCCAT  3850
                                                        
seq2  --------------------------------------------------  0

seq1  GTGCCTAAAGTAAAATTTAAATTTTTTACTTACCATGGTATTGTTTTTTA  3900
                                                        
seq2  --------------------------------------------------  0

seq1  ACAAGGTCTCACTGCAGGATATCTTCCATTGGGTCCTGAAGCATGGGATA  3950
                                                        
seq2  --------------------------------------------------  0

seq1  ATCTGAATGTAAGGCTGGTACAGTCTGTCTGGATCGGGTGCTGCCCTGGG  4000
                                                        
seq2  --------------------------------------------------  0

seq1  TGTCAAATTCAGTGCTTTGGTGCAATCTAGTCAACCACTCTATGAAAAAG  4050
                                                        
seq2  --------------------------------------------------  0

seq1  TAACTTTCCCGTCTTCTGAACAAGTTAAGACCATGAGTGGTTTTTATATA  4100
                                                        
seq2  --------------------------------------------------  0

seq1  TGTCGGCAGATTCTGGATACACAGCACAGGCTGGCCCTCTTTGTCTTACA  4150
                                                        
seq2  --------------------------------------------------  0

seq1  TTGCTGTGGTCTGCTGCCTGTGCAAGATTTTAGTGTCAGCCACCACAACA  4200
                                                        
seq2  --------------------------------------------------  0

seq1  GGTTTGTTGTTCACTATGCTTTTGGTTTGTCCTTCCATAAAACGGATTGT  4250
                                                ||||||||
seq2  ------------------------------------------CGGATTGT  8

seq1  AG-TCTATTCCTGAGCCACAGAGAAAATC--AGTTACT-ACGTACATTTG  4296
      || |||| ||  ||||| || || || ||   |||||| ||||||| |||
seq2  AGTTCTA-TCTGGAGCC-CACAGGAATTCCAGGTTACTAACGTACA-TTG  55

seq1  ACTGGCCTCTTGGA-GGAGCAGGAACAAA-CAGTTTGAGG-TCT-AAAAT  4342
      ||| |||||||||| |||||||  ||||| ||| |||||| ||| |||||
seq2  ACT-GCCTCTTGGAGGGAGCAG--ACAAACCAGGTTGAGGTTCTAAAAAT  102

seq1  GATCCCAGAGCAAGAGGTTGAGG-AATAATTACATGCTCACTGTGCAAA-  4390
      |||||  |||||||||| ||||| ||||||||||||||||||||||||| 
seq2  GATCCAGGAGCAAGAGG-TGAGGAAATAATTACATGCTCACTGTGCAAAA  151

seq1  -TAACCTAATTTTTCTTTTCTTCTCTGCCAGAATCTCTTGTGTGTGTGTG  4439
        ||||||||||||| ||||||||||||||||||||| ||||||||||||
seq2  TAAACCTAATTTTTC-TTTCTTCTCTGCCAGAATCTC-TGTGTGTGTGTG  199

seq1  TATGATGGTGAAGGTATGGCTACATCTCTGTGTGCTTCTGTTAGTATGTG  4489
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATGATGGTGAAGGTATGGCTACATCTCTGTGTGCTTCTGTTAGTATGTG  249

seq1  AACAGGTGCACATGTGTGTGTAGGAGTGCTGTTAGGTTTCTCTATTTCCA  4539
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACAGGTGCACATGTGTGTGTAGGAGTGCTGTTAGGTTTCTCTATTTCCA  299

seq1  TGTGGACGCTTACTGTTACCACTGACACTTGTTCATCAGGAATCCTCCTC  4589
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTGGACGCTTACTGTTACCACTGACACTTGTTCATCAGGAATCCTCCTC  349

seq1  ATGTCTGCTGAGATCAGTCTCTAATAGGGACCTGGGGCTTAGCAGTCAGG  4639
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGTCTGCTGAGATCAGTCTCTAATAGGGACCTGGGGCTTAGCAGTCAGG  399

seq1  CCAGGGTAGGTGTCCACTACAATATCCCAGGGATTCTCTGAGCTCTGCCT  4689
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCAGGGTAGGTGTCCACTACAATATCCCAGGGATTCTCTGAGCTCTGCCT  449

seq1  TCCCACATGAGGGAATACTGTTATAAATCATGATGCTCCACATATTATTT  4739
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCCACATGAGGGAATACTGTTATAAATCATGATGCTCCACATATTATTT  499

seq1  CCATATATTGTTTCTTTTGTGATTGATTCAGATGTCATGTGGCATGCTAT  4789
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCATATATTGTTTCTTTTGTGATTGATTCAGATGTCATGTGGCATGCTAT  549

seq1  GGTGCATATATGTGTGGATTAGTGCATAAGGTGAAGGAGTTTCTTCATTA  4839
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTGCATATATGTGTGGATTAGTGCATAAGGTGAAGGAGTTTCTTCATTA  599

seq1  TTTTCAAAATGCCATTCCTAGGGATCCATCATAGGTTGCCCAGTAAGGGA  4889
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTCAAAATGCCATTCCTAGGGATCCATCATAGGTTGCCCAGTAAGGGA  649

seq1  GCAACTACAGTGACTCACTGAGCCATTTCACTGGTCCTTGAGTGTGTGGT  4939
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCAACTACAGTGACTCACTGAGCCATTTCACTGGTCCTTGAGTGTGTGGT  699

seq1  TTCTGCAGGGAATCTGGGCATCTAATTCAGGTCCTAAGGCATCTAAGGAA  4989
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCTGCAGGGAATCTGGGCATCTAATTCAGGTCCTAAGGCATCTAAGGAA  749

seq1  AGAGTTTAACAGCTGTTATATGTCTCCAGTTCTTTTGAGAGAGAAAACAA  5039
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAGTTTAACAGCTGTTATATGTCTCCAGTTCTTTTGAGAGAGAAAACAA  799

seq1  AGCCAGGAAAATTATTCCCATTTTGATTTCTAATCCAGCCAACAAGACAT  5089
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCCAGGAAAATTATTCCCATTTTGATTTCTAATCCAGCCAACAAGACAT  849

seq1  CAAGCTGGGTACACAGAAAATCAAGGGACCAGTTGTTGGGGGGAAAAGCA  5139
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAGCTGGGTACACAGAAAATCAAGGGACCAGTTGTTGGGGGGAAAAGCA  899

seq1  TTCTTACTTTCAGGTTACACATTTCACGTAATTTATGCATCTTTCATTGG  5189
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCTTACTTTCAGGTTACACATTTCACGTAATTTATGCATCTTTCATTGG  949

seq1  TACATTGAGAGTTTGGGAGCAAAGAACACTTACCCTATTACCATTTTCTG  5239
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACATTGAGAGTTTGGGAGCAAAGAACACTTACCCTATTACCATTTTCTG  999

seq1  ACCTTTCAGTTGAAATTGTGCTGCATTTGTTTATGTGTTTGTGTGTTCAT  5289
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCTTTCAGTTGAAATTGTGCTGCATTTGTTTATGTGTTTGTGTGTTCAT  1049

seq1  TGCTTCGTTTATTTACCTCTTAATTTTTTATATGAAGCTACAGAGTGAAG  5339
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCTTCGTTTATTTACCTCTTAATTTTTTATATGAAGCTACAGAGTGAAG  1099

seq1  GGGCAACCTGTCTTGAAACAATACTTTGGTCAAAGGCCTGTCCTAAAATC  5389
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGCAACCTGTCTTGAAACAATACTTTGGTCAAAGGCCTGTCCTAAAATC  1149

seq1  CAGTATTCACTGAGCCTGAATTC  5412
      |||||||||||||||||||||||
seq2  CAGTATTCACTGAGCCTGAATTC  1172

seq1: chrX_144950502_144950636
seq2: B6Ng01-303C01.g_70_204

seq1  ACTCTGTAGGCCAGCCTGGCTATGAATTCAAAGATATGCCTGTCTCTACC  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTCTGTAGGCCAGCCTGGCTATGAATTCAAAGATATGCCTGTCTCTACC  50

seq1  TCCCATGTGCTTGGGTTAAAGGCATGTACTACCACTACAGCTTGGTGGTA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCCATGTGCTTGGGTTAAAGGCATGTACTACCACTACAGCTTGGTGGTA  100

seq1  TATTGAGGAAGGAAGGAAGGAAGGAAGGAGGGAGG  135
      |||||||||||||||||||||||||||||||||||
seq2  TATTGAGGAAGGAAGGAAGGAAGGAAGGAGGGAGG  135

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BAC

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Alignment Information