BAC Information

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BAC

Clone NameB6Ng01-306B01
ChromosomeX (Build37)
Map Location 114,162,782 - 114,163,896
singlet/doubletsinglet
Overlap genenone
Upstream geneLOC100039277, Cpxcr1, EG624153, LOC100039300, EG665045, LOC100039319
Downstream geneLOC624284, LOC665066, EG624388
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-306B01.bB6Ng01-306B01.g
ACCGA099198GA099199
length1,1801,117
definitionB6Ng01-306B01.b B6Ng01-306B01.g
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattcctcagattaatccaatagatattcacatatgtgtattaaaattt
aaatacaagaatttttgcatcagtactccttacagtggacaaagttgaaa
acaaatgtacatgaaaatagtcaacattataaacaataacatagctaaac
cctaggtaactatgtaataataaaaacaaattagttactcttgcttgcaa
taagatgaacacatccaacctatatgaattttgagaaacataagagtatc
caatagatgtttctgtacttaaagtttgacttttgaaaacaaaaagtgga
tttaaataaaataaaaattgctcttactttcggtggctgtacatgatgga
gagggagtctaaagaaggctgccatgaagaaagtctcaacaagaaaggtt
ctttcattttggaaggatacatagcaccactgacttatgatatgtgaact
atatgaatatatgttacagtttaataaaagttgtataaactgtgaaagtt
cacaagaaaaataacagggaacattggacaatccataaacgtagggaaac
agataacattgtcataagaaaaccatagatccttctacaaaaggctatac
tcaacaaaactggagaacctggatgaaatggaaaagattctagacagata
ccaggtaccaaagttgaatcaagatcaggttaatgaaagaaatagaagca
gtcattaacagtttcccaaccaaaaaaagcccaggaccagatgggtttag
tgcagagttctatcagacattcaaagaagatctaatcccagttcttcaca
aactattcaacaaaatagaactagaaaggaactctacccaactcattcta
tgaagccacaattactctgatgcctaaaccacaaaaagacccaacaaaga
tagagaacttcagaccaatttccttatgaatattgatgcaaaaatcctca
ataagttcttgctaaccgaatccaagaacatatcaaaacaatcatcatcc
tgaccagtagttcatccaggatgcaggatgttcaatattatgaaatctat
gactatccagttataacaaactcaaaccaaacccacatgatcatctcata
gaccgggaaataggcattggacaaaatcgaactcgattcatataagctct
ggaggatacgagttccaggcctatacctta

gaattcttctgccatttgtttgacatagaaactcacattcttcgtgcttt
atttgtactcttgagaccaatttgtagagacattatgaggcaaagagacg
caggtgtatctggaaatcacggtcatggtttgtgtgagaacagaaagtgc
tctttttgtttccttgttccctgaagaaatatcacttaggacttagaaaa
ggtcccttttattcttgtgacttctgtagccaaaagagcattctgatttc
atgaaaccatgtcatttaagaaatgacttattcgtgtatctattgtcact
tttagttgttatgcaacaaatatttatggctttctcactcttttattttg
tatatgcatagcagacatagatatatatgtatgtatgttgtgaacaaaat
tcctggatacagagcaatatcctttgctggaccttttacaagactgatta
accaagcagagctttgttgtgtttgcaatttcagaaacacagaagaacat
gcttgattttttccatgtcagaatgtattgaccagcagtaaattcaaaaa
atatggcagtttcaaaggtagcaatttgcctgatagttttgctttttctt
gtgagctggtcaaggcaaattattgtttaccttaattactaatattaaca
ttcatatgatacatcaaatagaaatgtgtctttctacataaatgtatgta
gattacagaaatggatgtaaagagacaaagagaaggtagcagggttaaag
atgcttcacaagtggacttactgaaatgtaaatggaataagataaggtat
acaaacacaaaggtgctcagaaaaggctgcttctgtggaatcagatcact
gttgagtgggaattgagaaaggaaatgcagagaagagtccagatgtgagg
tgaaagggccagatcaggtcctaataaagagtagataggtagatgatatc
tccagatggcaacaggagaacagaaagatggcagacgaacaaaatattat
caataaatattctgggttatcaggatgaaaggtgatcatgctgtctactt
tttagtgtctggacactttgtagtactaacggagtaatcataactttcct
gaatcagggtgtaatag
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chrX_114162782_114163896
seq2: B6Ng01-306B01.g_66_1182

seq1  GAATTCTTCTGCCATTTGTTTGACATAGAAACTCACATTCTTCGTGCTTT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTTCTGCCATTTGTTTGACATAGAAACTCACATTCTTCGTGCTTT  50

seq1  ATTTGTACTCTTGAGACCAATTTGTAGAGACATTATGAGGCAAAGAGACG  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTTGTACTCTTGAGACCAATTTGTAGAGACATTATGAGGCAAAGAGACG  100

seq1  CAGGTGTATCTGGAAATCACGGTCATGGTTTGTGTGAGAACAGAAAGTGC  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGGTGTATCTGGAAATCACGGTCATGGTTTGTGTGAGAACAGAAAGTGC  150

seq1  TCTTTTTGTTTCCTTGTTCCCTGAAGAAATATCACTTAGGACTTAGAAAA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTTTTTGTTTCCTTGTTCCCTGAAGAAATATCACTTAGGACTTAGAAAA  200

seq1  GGTCCCTTTTATTCTTGTGACTTCTGTAGCCAAAAGAGCATTCTGATTTC  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTCCCTTTTATTCTTGTGACTTCTGTAGCCAAAAGAGCATTCTGATTTC  250

seq1  ATGAAACCATGTCATTTAAGAAATGACTTATTCGTGTATCTATTGTCACT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGAAACCATGTCATTTAAGAAATGACTTATTCGTGTATCTATTGTCACT  300

seq1  TTTAGTTGTTATGCAACAAATATTTATGGCTTTCTCACTCTTTTATTTTG  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTAGTTGTTATGCAACAAATATTTATGGCTTTCTCACTCTTTTATTTTG  350

seq1  TATATGCATAGCAGACATAGATATATATGTATGTATGTTGTGAACAAAAT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATATGCATAGCAGACATAGATATATATGTATGTATGTTGTGAACAAAAT  400

seq1  TCCTGGATACAGAGCAATATCCTTTGCTGGACCTTTTACAAGACTGATTA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCTGGATACAGAGCAATATCCTTTGCTGGACCTTTTACAAGACTGATTA  450

seq1  ACCAAGCAGAGCTTTGTTGTGTTTGCAATTTCAGAAACACAGAAGAACAT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCAAGCAGAGCTTTGTTGTGTTTGCAATTTCAGAAACACAGAAGAACAT  500

seq1  GCTTGATTTTTTCCATGTCAGAATGTATTGACCAGCAGTAAATTCAAAAA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTTGATTTTTTCCATGTCAGAATGTATTGACCAGCAGTAAATTCAAAAA  550

seq1  ATATGGCAGTTTCAAAGGTAGCAATTTGCCTGATAGTTTTGCTTTTTCTT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATATGGCAGTTTCAAAGGTAGCAATTTGCCTGATAGTTTTGCTTTTTCTT  600

seq1  GTGAGCTGGTCAAGGCAAATTATTGTTTACCTTAATTACTAATATTAACA  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGAGCTGGTCAAGGCAAATTATTGTTTACCTTAATTACTAATATTAACA  650

seq1  TTCATATGATACATCAAATAGAAATGTGTCTTTCTACATAAATGTATGTA  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCATATGATACATCAAATAGAAATGTGTCTTTCTACATAAATGTATGTA  700

seq1  GATTACAGAAATGGATGTAAAGAGACAAAGAGAAGGTAGCAGGGTTAAAG  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATTACAGAAATGGATGTAAAGAGACAAAGAGAAGGTAGCAGGGTTAAAG  750

seq1  ATGCTTCACAAGTGGACTTACTGAAATGTAAATGGAATAAGATAAGGTAT  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGCTTCACAAGTGGACTTACTGAAATGTAAATGGAATAAGATAAGGTAT  800

seq1  ACAAACACAAAGGTGCTCAGAAAAGGCTGCTTCTGTGGAATCAGATCACT  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAAACACAAAGGTGCTCAGAAAAGGCTGCTTCTGTGGAATCAGATCACT  850

seq1  GTTGAGTGGGAATTGAGAAAGGAAATGCAGAGAAGAGTCCAGATGTGAGG  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTGAGTGGGAATTGAGAAAGGAAATGCAGAGAAGAGTCCAGATGTGAGG  900

seq1  TGAAAGGGCCAGATCAGGTCCTAATAAAGAGTAGATAGGTAGATGATATC  950
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAAAGGGCCAGATCAGGTCCTAATAAAGAGTAGATAGGTAGATGATATC  950

seq1  TCCAGATGGCAACAAGAGAACAGAAAGATGGCAGACGAACAAAATA-TAT  999
      |||||||||||||| ||||||||||||||||||||||||||||||| |||
seq2  TCCAGATGGCAACAGGAGAACAGAAAGATGGCAGACGAACAAAATATTAT  1000

seq1  CAAT-AATATTCTGGG-TATCA-GATGAAAGGTGATCATTGCTGTCTTAC  1046
      |||| ||||||||||| ||||| ||||||||||||||| ||||||| |||
seq2  CAATAAATATTCTGGGTTATCAGGATGAAAGGTGATCA-TGCTGTC-TAC  1048

seq1  TTTTAAGTGTCT-GACACTTTGTAAGTACTAAGGGAGTTAT-ATATACTT  1094
      |||| ||||||| |||||||||| |||||||| ||||| || ||| ||||
seq2  TTTTTAGTGTCTGGACACTTTGT-AGTACTAACGGAGTAATCATA-ACTT  1096

seq1  TCCTTGATCA-GGTGTATATAG  1115
      ||||  |||| |||||| ||||
seq2  TCCTGAATCAGGGTGTA-ATAG  1117


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