BAC Information

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BAC

Clone NameB6Ng01-308J10
ChromosomeX (Build37)
Map Location 92,528,432 - 92,529,306
singlet/doubletsinglet
Overlap genenone
Upstream geneLOC385495, LOC670263, LOC100042098, LOC631145, 0610008C08Rik, EG668148, Maged1, LOC668150, EG385499, EG668156, Gspt2, LOC385500, Zxdb, LOC631331, EG631319, Zxda, Gm371, 9630042H07Rik, Arhgef9, LOC619688, LOC100042189
Downstream gene2810002O09Rik, Asb12, LOC668202, AK129302, A130028J20Rik, 1700010D01Rik, Las1l, Msn, Psmb7-ps1, LOC668221, Vsig4, B230358A15Rik
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-308J10.bB6Ng01-308J10.g
ACCGA101049GA101050
length1,114992
definitionB6Ng01-308J10.b B6Ng01-308J10.g
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattcacatcatttatgtttcacagcatttttggaaaacataaattgtg
acatcagttatcatactacttcttgatgacataatgtaaccttcgaagtt
aatatgaggtgatgcttcatatctcctccgtaactccatagtcactgttt
tcacattaaacatgaaaaaaaaaagagtaaagctttctattacctaccct
ctcccatacttaaaactctcaaaggaaatgcctagaccttcaggaagaat
tagagtccatgtccattttcagccacagacactcagcagtaagaaaaaca
atgaatttatgaaatttttaggcaaacagatggatctggaggatatgatc
ttgagtgaggtaatgcaatcacaagagaacacacatggtatacactcact
gataagtagatattagcccagaagctcagaatactcaagatacaatttga
ttctatttctttaggggatatgggactgtttgggtcattaatctgatcct
gatttaattttgttacctggtacctgtctagaaatttgtccatttcttcc
aggttttccagttttgttcagtatagccttttgtagaaggatctgatggt
gttttggatttcttcaggatctgttgttatgtctcccttttcattcctgc
ttttgttaattaggatgctgtccctgtgccctctagtgagtctggctaag
ggtttatctatcgtgttgattttctcaaagaaccagctcctggtttggtt
gattctttgattagttcttcttgtttccacttggttgatttcacccctga
gtttgattatttcctgccatctactcctcttggatttgcttccttttgtt
ctagagcttttaggtgtgttgtcaagctgctaatgtgtgctctctctagt
ttctttttggaggcactcagggctatgaatttttcctcttaggactgctt
tcattgtgtcccataagtttgggtattgttgtggccttccattttcatta
aacctctaaaaagtctgtaatttctttattcctttccttgaccaagtatc
atttgaggagaggtgtgttcagcttccacgtgatgttgctttgaataatt
tatgctgtttttga
gaattctctgtttagctctatatttttttaatagggttatttggttctct
agagtctaacttcttgagttctttttatatttttggtagtagccctctat
tggatatagagtaggtaaagatcttttacaatctgtgcgtttccattttg
tcccattgacaatgtcctttgcttttcatttttaaaaaaaatttttttta
gagacgaaggacacaatttttaatatcatttgtctggctggggcaaatgt
ccaaggaaaagccagccttgaacagacgatttcacaaacatatgcacact
ttaggcttatatttttcttatgtagtatcatccttaaatgtcttttagat
cctgaccccaggttacacttttttgttttttttttattttgtttttttaa
ttaggtatttatttcatttaaatttccaacacgacagagccgctgaggca
gcacccttggcgggacgcagacagccggccaccgtccggaccagatgaca
ggtgtccgcctggcttgggaggcggcctcagcctcagcagcagcggtcgc
catcttggttcccggactcagcagaacttaggaaattagtctgaacaggt
gagagggtgcaccagagaaccggacagcttctgggacaggcagaagcaca
gagccgctgaggcagcacccttggcgggccgcagacagccggccaccgtc
tggaccagaaggcaggtgtccgcctggcttgggaggcggcctcagcctca
ggagcagcggtcgccatcttggttccgggactccctggaacttaggaatt
tagtctgcacaggtgagagtctgcaccacagaagctgacagcttctggga
actgccaaagcaacacagcttctgagaaaggccctgttttgggccttctt
cttcggcacaccttccctataagagagcttgctagcagagagtgctctga
gcactgaaaatcagaggagagaatctgtctcccaggtctgct
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chrX_92528432_92529306
seq2: B6Ng01-308J10.g_67_941

seq1  GAATTCTCTGTTTAGCTCTATATTTTTTTAATAGGGTTATTTGGTTCTCT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTCTGTTTAGCTCTATATTTTTTTAATAGGGTTATTTGGTTCTCT  50

seq1  AGAGTCTAACTTCTTGAGTTCTTTTTATATTTTTGGTAGTAGCCCTCTAT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAGTCTAACTTCTTGAGTTCTTTTTATATTTTTGGTAGTAGCCCTCTAT  100

seq1  TGGATATAGAGTAGGTAAAGATCTTTTACAATCTGTGCGTTTCCATTTTG  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGATATAGAGTAGGTAAAGATCTTTTACAATCTGTGCGTTTCCATTTTG  150

seq1  TCCCATTGACAATGTCCTTTGCTTTTCATTTTTAAAAAAAATTTTTTTTA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCCATTGACAATGTCCTTTGCTTTTCATTTTTAAAAAAAATTTTTTTTA  200

seq1  GAGACGAAGGACACAATTTTTAATATCATTTGTCTGGCTGGGGCAAATGT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGACGAAGGACACAATTTTTAATATCATTTGTCTGGCTGGGGCAAATGT  250

seq1  CCAAGGAAAAGCCAGCCTTGAACAGACGATTTCACAAACATATGCACACT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCAAGGAAAAGCCAGCCTTGAACAGACGATTTCACAAACATATGCACACT  300

seq1  TTAGGCTTATATTTTTCTTATGTAGTATCATCCTTAAATGTCTTTTAGAT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAGGCTTATATTTTTCTTATGTAGTATCATCCTTAAATGTCTTTTAGAT  350

seq1  CCTGACCCCAGGTTACACTTTTTTGTTTTTTTTTTATTTTGTTTTTTTAA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTGACCCCAGGTTACACTTTTTTGTTTTTTTTTTATTTTGTTTTTTTAA  400

seq1  TTAGGTATTTATTTCATTTAAATTTCCAACACGACAGAGCCGCTGAGGCA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAGGTATTTATTTCATTTAAATTTCCAACACGACAGAGCCGCTGAGGCA  450

seq1  GCACCCTTGGCGGGACGCAGACAGCCGGCCACCGTCCGGACCAGATGACA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCACCCTTGGCGGGACGCAGACAGCCGGCCACCGTCCGGACCAGATGACA  500

seq1  GGTGTCCGCCTGGCTTGGGAGGCGGCCTCAGCCTCAGCAGCAGCGGTCGC  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTGTCCGCCTGGCTTGGGAGGCGGCCTCAGCCTCAGCAGCAGCGGTCGC  550

seq1  CATCTTGGTTCCCGGACTCAGCAGAACTTAGGAAATTAGTCTGAACAGGT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATCTTGGTTCCCGGACTCAGCAGAACTTAGGAAATTAGTCTGAACAGGT  600

seq1  GAGAGGGTGCACCAGAGAACCGGACAGCTTCTGGGACAGGCAGAAGCACA  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGAGGGTGCACCAGAGAACCGGACAGCTTCTGGGACAGGCAGAAGCACA  650

seq1  GAGCCGCTGAGGCAGCACCCTTGGCGGGCCGCAGACAGCCGGCCACCGTC  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGCCGCTGAGGCAGCACCCTTGGCGGGCCGCAGACAGCCGGCCACCGTC  700

seq1  TGGACCAGAAGGCAGGTGTCCGCCTGGCTTGGGAGGCGGCCTCAGCCTCA  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGACCAGAAGGCAGGTGTCCGCCTGGCTTGGGAGGCGGCCTCAGCCTCA  750

seq1  GGAGCAGCGGTCGCCATCTTGGTTCCGGGACTCCCTGGAACTTAGGAATT  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGAGCAGCGGTCGCCATCTTGGTTCCGGGACTCCCTGGAACTTAGGAATT  800

seq1  TAGTCTGCACAGGTGAGAGTCTGCACCACAGAAGCTGACAGCTTCTGGGA  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGTCTGCACAGGTGAGAGTCTGCACCACAGAAGCTGACAGCTTCTGGGA  850

seq1  ACTGCCAAAGCAACACAGCTTCTGA  875
      |||||||||||||||||||||||||
seq2  ACTGCCAAAGCAACACAGCTTCTGA  875