BAC Information

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BAC

Clone NameB6Ng01-308M04
ChromosomeX (Build37)
Map Location 162,219,743 - 162,220,917
singlet/doubletsinglet
Overlap genenone
Upstream geneMospd2, Fancb, LOC627045, Glra2
Downstream geneLOC100040753, Gemin8, Gpm6b, Ofd1, Trappc2, Rab9, LOC100040795, A630018P17Rik, Egfl6, LOC100041912
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-308M04.bB6Ng01-308M04.g
ACCGA101179GA101180
length1,167129
definitionB6Ng01-308M04.b B6Ng01-308M04.g
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattcacatacatgaaataaataaatcttttaaaaaaaaggaaattact
gaatataagtgcatgaaatagtctttatattttaaatgtctgttccattt
tgcagaatctagggttggcaagtttaggcatacctcttacatagtaataa
caaagcaggaaaaaaagaagaaaaacttaagccttatgaaatctaaactt
agaattcatgcactagcatagataccccatttaaaaatatttagttctgt
tacatgcatgtttgtatatctgtgtatatatactggcaccactttcacag
tggtgcccaaagaaggtagaagtgctgcatcagataccttggaactggag
ttatagataattatggaatgctcaacaagggtgctgggaactgaacatga
gtcctctgtaagtgtagcaagaactcttaactacgtagtcttcttttcag
cctctcattattttcattaaaacaaggtacatggttgagtccagatttta
ttttgagagaacaagaaattacctcattagtgagagcttgaatgccaccc
aaacaaagggagtaagcaatggagcaatgagaaatcaaaatatacatcaa
aatgagacatgtttagaagtgatgaattgtgtttagttgtatacagtaga
caccttgagaacaggtctatgtatgcgtatcaattattagtgagcattgg
gtacactgatctttcaattaattctaagaaaatggagaactttttatttg
ggtaagactatgtttatctgtggaataactcctgcctgtccccaaattac
atttttgatgcaaaggtttttaaatgttcttcatatactatttattgttt
atcttggaaatgccaatctgttaaatgagatttaattgactttaatatgt
gtcctcatattcaacagtgaactgaaattatatttactatttggatatcc
tagttcctactaatgggttagaaaaagggaaactatttgttcattacttt
caaattctctgtagtagggcaagtctttatatccagtaaaccgaaagttt
gagcagtaaagtttagtgcacagaactcccattttatagcacatgatatg
tcatgacataaaagtctctcatactattttcttatcccaagtagctggtc
taacattggctatattc

aaatgtaattctaatagctctgcctttatatgttacgtggtctttttcct
ttacacctcttaatactctttgttctgtaagtttaatgttttaatcatta
tgtggcagatggtgggggaggtgggggag
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chrX_162219743_162220917
seq2: B6Ng01-308M04.b_45_1211 (reverse)

seq1  GAATATAGCCATTGTTTAGCACAGCTACTTGGGGAATAAGAAAATAGTAT  50
      ||||||||||| || ||||  ||||||||||||  |||||||||||||| 
seq2  GAATATAGCCAATG-TTAGACCAGCTACTTGGG--ATAAGAAAATAGTA-  46

seq1  TGAGAGA-TTTTATGTCATTGACATTATCCATGTGGCTATAAAATGGGAG  99
      ||||||| |||||||||| ||||| ||| ||||| |||||||||||||||
seq2  TGAGAGACTTTTATGTCA-TGACA-TAT-CATGT-GCTATAAAATGGGAG  92

seq1  TTCTGTGCACTAAACTTTACTGCTCAAACTTTCGGGTTTACTGGATATAA  149
      ||||||||||||||||||||||||||||||||| ||||||||||||||||
seq2  TTCTGTGCACTAAACTTTACTGCTCAAACTTTC-GGTTTACTGGATATAA  141

seq1  AGACTTGCCCTACTACAGAGAATTTGAAAGTAATGAACAAATAGTTTCCC  199
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGACTTGCCCTACTACAGAGAATTTGAAAGTAATGAACAAATAGTTTCCC  191

seq1  TTTTTTCTAA-CCATTAGTAGGAACTAGGATATCCAAATAGTAAATATAA  248
       ||||||||| |||||||||||||||||||||||||||||||||||||||
seq2  -TTTTTCTAACCCATTAGTAGGAACTAGGATATCCAAATAGTAAATATAA  240

seq1  TTTCAGTTCACTGTTGAATATGAGGACACATATTAAAGTCAATTAAATCT  298
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTCAGTTCACTGTTGAATATGAGGACACATATTAAAGTCAATTAAATCT  290

seq1  CATTTAACAGATTGGCATTTCCAAGATAAACAATAAATAGTATATGAAGA  348
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATTTAACAGATTGGCATTTCCAAGATAAACAATAAATAGTATATGAAGA  340

seq1  ACATTTAAAAACCTTTGCATCAAAAATGTAATTTGGGGACAGGCAGGAGT  398
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACATTTAAAAACCTTTGCATCAAAAATGTAATTTGGGGACAGGCAGGAGT  390

seq1  TATTCCACAGATAAACATAGTCTTACCCAAATAAAAAGTTCTCCATTTTC  448
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATTCCACAGATAAACATAGTCTTACCCAAATAAAAAGTTCTCCATTTTC  440

seq1  TTAGAATTAATTGAAAGATCAGTGTACCCAATGCTCACTAATAATTGATA  498
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAGAATTAATTGAAAGATCAGTGTACCCAATGCTCACTAATAATTGATA  490

seq1  CGCATACATAGACCTGTTCTCAAGGTGTCTACTGTATACAACTAAACACA  548
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CGCATACATAGACCTGTTCTCAAGGTGTCTACTGTATACAACTAAACACA  540

seq1  ATTCATCACTTCTAAACATGTCTCATTTTGATGTATATTTTGATTTCTCA  598
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTCATCACTTCTAAACATGTCTCATTTTGATGTATATTTTGATTTCTCA  590

seq1  TTGCTCCATTGCTTACTCCCTTTGTTTGGGTGGCATTCAAGCTCTCACTA  648
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGCTCCATTGCTTACTCCCTTTGTTTGGGTGGCATTCAAGCTCTCACTA  640

seq1  ATGAGGTAATTTCTTGTTCTCTCAAAATAAAATCTGGACTCAACCATGTA  698
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGAGGTAATTTCTTGTTCTCTCAAAATAAAATCTGGACTCAACCATGTA  690

seq1  CCTTGTTTTAATGAAAATAATGAGAGGCTGAAAAGAAGACTACGTAGTTA  748
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTTGTTTTAATGAAAATAATGAGAGGCTGAAAAGAAGACTACGTAGTTA  740

seq1  AGAGTTCTTGCTACACTTACAGAGGACTCATGTTCAGTTCCCAGCACCCT  798
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAGTTCTTGCTACACTTACAGAGGACTCATGTTCAGTTCCCAGCACCCT  790

seq1  TGTTGAGCATTCCATAATTATCTATAACTCCAGTTCCAAGGTATCTGATG  848
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTTGAGCATTCCATAATTATCTATAACTCCAGTTCCAAGGTATCTGATG  840

seq1  CAGCACTTCTACCTTCTTTGGGCACCACTGTGAAAGTGGTGCCAGTATAT  898
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGCACTTCTACCTTCTTTGGGCACCACTGTGAAAGTGGTGCCAGTATAT  890

seq1  ATACACAGATATACAAACATGCATGTAACAGAACTAAATATTTTTAAATG  948
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATACACAGATATACAAACATGCATGTAACAGAACTAAATATTTTTAAATG  940

seq1  GGGTATCTATGCTAGTGCATGAATTCTAAGTTTAGATTTCATAAGGCTTA  998
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGTATCTATGCTAGTGCATGAATTCTAAGTTTAGATTTCATAAGGCTTA  990

seq1  AGTTTTTCTTCTTTTTTTCCTGCTTTGTTATTACTATGTAAGAGGTATGC  1048
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTTTTTCTTCTTTTTTTCCTGCTTTGTTATTACTATGTAAGAGGTATGC  1040

seq1  CTAAACTTGCCAACCCTAGATTCTGCAAAATGGAACAGACATTTAAAATA  1098
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTAAACTTGCCAACCCTAGATTCTGCAAAATGGAACAGACATTTAAAATA  1090

seq1  TAAAGACTATTTCATGCACTTATATTCAGTAATTTCCTTTTTTTTAAAAG  1148
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAAGACTATTTCATGCACTTATATTCAGTAATTTCCTTTTTTTTAAAAG  1140

seq1  ATTTATTTATTTCATGTATGTGAATTC  1175
      |||||||||||||||||||||||||||
seq2  ATTTATTTATTTCATGTATGTGAATTC  1167


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