BAC Information

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BAC

Clone NameB6Ng01-309L12
ChromosomeX (Build37)
Map Location 145,308,955 - 145,310,110
singlet/doubletsinglet
Overlap genenone
Upstream geneEG624023, LOC666184, LOC100039511, LOC666812, LOC100039519, LOC434864, EG624096, LOC100039545, LOC666837, LOC100039553, LOC100034729, LOC666861, EG666864, LOC434866, EG666868, EG624260
Downstream geneLOC434865, EG624310, Ott, LOC666888, LOC100039598, LOC100039890, LOC100039612, EG666923, EG624378, LOC100039934, LOC100039629, LOC382243, EG666961, EG666968, OTTMUSG00000018988, LOC100039651
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-309L12.bB6Ng01-309L12.g
ACCGA101890GA101891
length1,1761,136
definitionB6Ng01-309L12.b B6Ng01-309L12.g
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattcctgatctttccagaacttttatcgtgaatgggtgttggatcttg
tcaaatgctttttctgcatctagcgagatgatcatgtggtttttgtcttt
gagtttgtttatataatggattacattgatggattttcgtatattaaacc
atccctgcatccctggaataaaacctacttggtcaggatggatgattgct
ttaatgtgttcttggattcggttagcgagaattttattgaggatttttgc
atcgatattcataagagaaattggtctgaagttctctatctttgttgggc
ctttctgtggtttaggtatcagagtaatagtggcttcataaaatgagttg
ggtagagtaccttctacttctatcttgtgaaatagtttgtgcagaactgg
aattagatcttctttgaaggtctgatagaactctgcactaaacccgtctg
gtcctgggctttttttggttgggagactatttataactgcttttatttct
ttaggggatatgggactgtttagaagatcaacttgatcctgattcaactt
tggtacctggtttctgtccagaaatttgtccatttcgtcccggtttccca
gttttttgagtatagccttttgtagaaggatctgatggtgttttggattt
cttcaggatctgttgttatgtctccattttcagttctgattttgttaatt
aggattttgtccctgtgccctctagtgagtctagctaatggtttatctat
cttgttgatttttctcaaagaaccaactcctcgtttggttaattctttga
atagttcttcttgtttccacttggttgatttcacccctgagtttgattat
ttcctgccatctactcctcttgggtgaatttgcttcctttttttctagag
cttttagatgtgttttcaagctgctagtatgtgctctctcccgtttcttc
ttggaggcactcagagctatgagtttcctcttagaaatgctttcattgtg
tcccaaaaggtttgggtacgtcgtgcttcattttcatttaactctaaagt
cttatttctttcttattctttccttgactagtatcattgagagaaagtgt
ggtcagttcatgtgaagtgtgcttccatattcttaatatgaagaatcacc
ctagagccatagtggatctggattag
gaattcaagactggtacagtctgtctggatcagatggtgccctgggtatc
aaattcagtgtttggtgcaatctagtcaagcactctatgttaaagcaacc
ctccggacttctgaacaagttaagatcttgggtgatttttatgtatatag
gtagattctagatatacagcacaggctggccctctcagtcatacattgct
gtggtcttccgttagagcaagattttagtgtcagccaccacaacagattt
gttgttcaatttgcttttgtttgtctttccataaagtggattgtattata
ttccagagctacagagaaaatcagttactaagtaccattgactggcctca
tggagaaacaggagcaaacattttgaggtataaaatgaaaccagagcaaa
ggttaaggaataattacatgttcactgcgcaaataacctaatttttcttt
tcttctctgccagaatcacttgtgtgtgtgtgtatgatggtgaaggtatg
actacatctctgtgtgcttctgttagtatgtgaacaggtgcacatgtgtg
tataggagtgctgttaggtttgtctacttccatttggatgctcactgtta
ctactgacacttgttcatcaggattcttcctcatgtctgctgagatcagt
ctctaatagggaccaaggtcttagcagtcaggctgggtatttgtccacta
caacatcccaggaattctctgagctctgccttcccacatgagggaatact
gttataaatcatgatgcttcacatattacttccatatattgttttttttg
tgattgattcagacgtcatgtcgcatgctatggtacatatatgtgtgaat
aagtgcataaggtgaaggaattgcttcattattttcaaactgccatttcc
caggtatccaacataaggttgcccagtaaggagcactacagtgactcact
gagccatttcactggtccttgagtgtgtggttctgcaggaatctgggcat
ctaatcagtcctaagcatcttaagaaagagtttacagctgttatatgtct
caggtcctttgacagaaaacaagcaagaaagtatcccatttggatttcta
tcatcacagacactatgctaggtaccagaattcaag
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chrX_145308955_145310110
seq2: B6Ng01-309L12.g_69_1204

seq1  GAATTCAAGACTGGTACAGTCTGTCTGGATCAGATGGTGCCCTGGGTATC  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCAAGACTGGTACAGTCTGTCTGGATCAGATGGTGCCCTGGGTATC  50

seq1  AAATTCAGTGTTTGGTGCAATCTAGTCAAGCACTCTATGTTAAAGCAACC  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAATTCAGTGTTTGGTGCAATCTAGTCAAGCACTCTATGTTAAAGCAACC  100

seq1  CTCCGGACTTCTGAACAAGTTAAGATCTTGGGTGATTTTTATGTATATAG  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCCGGACTTCTGAACAAGTTAAGATCTTGGGTGATTTTTATGTATATAG  150

seq1  GTAGATTCTAGATATACAGCACAGGCTGGCCCTCTCAGTCATACATTGCT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTAGATTCTAGATATACAGCACAGGCTGGCCCTCTCAGTCATACATTGCT  200

seq1  GTGGTCTTCCGTTAGAGCAAGATTTTAGTGTCAGCCACCACAACAGATTT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGGTCTTCCGTTAGAGCAAGATTTTAGTGTCAGCCACCACAACAGATTT  250

seq1  GTTGTTCAATTTGCTTTTGTTTGTCTTTCCATAAAGTGGATTGTATTATA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTGTTCAATTTGCTTTTGTTTGTCTTTCCATAAAGTGGATTGTATTATA  300

seq1  TTCCAGAGCTACAGAGAAAATCAGTTACTAAGTACCATTGACTGGCCTCA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCCAGAGCTACAGAGAAAATCAGTTACTAAGTACCATTGACTGGCCTCA  350

seq1  TGGAGAAACAGGAGCAAACATTTTGAGGTATAAAATGAAACCAGAGCAAA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGAGAAACAGGAGCAAACATTTTGAGGTATAAAATGAAACCAGAGCAAA  400

seq1  GGTTAAGGAATAATTACATGTTCACTGCGCAAATAACCTAATTTTTCTTT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTTAAGGAATAATTACATGTTCACTGCGCAAATAACCTAATTTTTCTTT  450

seq1  TCTTCTCTGCCAGAATCACTTGTGTGTGTGTGTATGATGGTGAAGGTATG  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTTCTCTGCCAGAATCACTTGTGTGTGTGTGTATGATGGTGAAGGTATG  500

seq1  ACTACATCTCTGTGTGCTTCTGTTAGTATGTGAACAGGTGCACATGTGTG  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTACATCTCTGTGTGCTTCTGTTAGTATGTGAACAGGTGCACATGTGTG  550

seq1  TATAGGAGTGCTGTTAGGTTTGTCTACTTCCATTTGGATGCTCACTGTTA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATAGGAGTGCTGTTAGGTTTGTCTACTTCCATTTGGATGCTCACTGTTA  600

seq1  CTACTGACACTTGTTCATCAGGATTCTTCCTCATGTCTGCTGAGATCAGT  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTACTGACACTTGTTCATCAGGATTCTTCCTCATGTCTGCTGAGATCAGT  650

seq1  CTCTAATAGGGACCAAGGTCTTAGCAGTCAGGCTGGGTATTTGTCCACTA  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCTAATAGGGACCAAGGTCTTAGCAGTCAGGCTGGGTATTTGTCCACTA  700

seq1  CAACATCCCAGGAATTCTCTGAGCTCTGCCTTCCCACATGAGGGAATACT  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAACATCCCAGGAATTCTCTGAGCTCTGCCTTCCCACATGAGGGAATACT  750

seq1  GTTATAAATCATGATGCTTCACATATTACTTCCATATATTGTTTTTTTTG  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTATAAATCATGATGCTTCACATATTACTTCCATATATTGTTTTTTTTG  800

seq1  TGATTGATTCAGACGTCATGTCGCATGCTATGGTACATATATGTGTGAAT  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGATTGATTCAGACGTCATGTCGCATGCTATGGTACATATATGTGTGAAT  850

seq1  AAGTGCATAAGGTGAAGGAATTGCTTCATTATTTTCAAACTGCCA-TTCC  899
      ||||||||||||||||||||||||||||||||||||||||||||| ||||
seq2  AAGTGCATAAGGTGAAGGAATTGCTTCATTATTTTCAAACTGCCATTTCC  900

seq1  CAGGTATCCAACAT-AGGTTGCCCAGTAAGGGAGCAACTACAGTGACTCA  948
      |||||||||||||| |||||||||||||| ||||| ||||||||||||||
seq2  CAGGTATCCAACATAAGGTTGCCCAGTAA-GGAGC-ACTACAGTGACTCA  948

seq1  CTGAGCCATTTCACTGGTCCTTGAGTGTGTGGTTTCTGCAGGGAATCTGG  998
      |||||||||||||||||||||||||||||||| ||||||| |||||||||
seq2  CTGAGCCATTTCACTGGTCCTTGAGTGTGTGG-TTCTGCA-GGAATCTGG  996

seq1  GCATCTAATTCAGGTCCTAAGGCATCTAAGGAAAGAGTTTAACAGCTGTT  1048
      |||||||| ||| ||||||| |||||| | |||||||||| |||||||||
seq2  GCATCTAA-TCA-GTCCTAA-GCATCTTAAGAAAGAGTTT-ACAGCTGTT  1042

seq1  ATATGTCTCCAGTTCTTTTGACAGAGAAAACAAAGCCAGGAAAATTATTC  1098
      |||||||| ||| || ||||||  ||||||| |||| ||  ||| || ||
seq2  ATATGTCT-CAGGTCCTTTGAC--AGAAAAC-AAGCAAG--AAAGTA-TC  1085

seq1  CCATTTTGATTTCTAATCCAGCCAACA-AGACACCATGCTAGGTACACAG  1147
      |||||| ||||||||       || || |||||| ||||||||||| |||
seq2  CCATTTGGATTTCTA------TCATCACAGACACTATGCTAGGTAC-CAG  1128

seq1  AAAATCAAG  1156
       || |||||
seq2  -AATTCAAG  1136