BAC Information

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BAC

Clone NameB6Ng01-310G02
ChromosomeX (Build37)
Map Location 63,480,782 - 63,481,927
singlet/doubletsinglet
Overlap genenone
Upstream geneLOC671840
Downstream geneSlitrk2, LOC666824, LOC627734, EG666828
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-310G02.bB6Ng01-310G02.g
ACCGA102371GA102372
length1,132529
definitionB6Ng01-310G02.b B6Ng01-310G02.g
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattcacatgatgcctacatgtatatataaacaaatacccatacatata
acaataaaaatattttaaaaattcaaaaccctaaccatcacactacctaa
aataccacgttagactttgcctcctcacaacaaccctcaaaaagattcaa
aagagaaattttctaagctttggatactatcattcaactgattactagcc
tattatctgctgagcacattgagctaattattcaaatttcatcattggta
acatctttaaaagaactaagtatagcagagcaatagttcaagaacacagt
tttagagacttttagcacagaaaacagtgggaagatggagataaaggttg
cattggttttagtgtcaatatatttttctgtaagtagtatgtgattcacc
tatcaggatatgtgttgatggtgctgtcatcatataaagttgagtgtaca
tgaaaaacaatagaaatatacattttattttccattttatttatgagttg
gttataggccatcaaagattacagtgctttggtaataggtttgtactcca
aacaaataatctctttgtagaaaaaataaatcacatgagaaaactaaaaa
gtaaagtgtaacttagacattggtctggaaagcttgctctgggttctgtg
atcactaatatgttgctaagaaatacaaacaataaaatgaagagtattta
tagaaatgtaagggacaagaggtggtaattgtaggcaattatggtcaaag
ttcactatatacacatacaaaaatatcataaggaaactcattattatgta
taattaacatatgttaataaaaacaaaaacatggtattaaagaaatggtc
cagaagttaagagcactgtctgctttttagtagaacctaagtttatttcc
cagcacccatttaatgtctcataacagtctgtacctgcaattccagagaa
tctgatgctatcttctgcctccttgagcacagtatgcatgcagtacatag
aatacatgtagcaaatgtccctacacacaaataataaacatttgacaagg
tatctatactttatacatacgtagagtcaaagattctgtgttatcgatga
aggttccacactgtgtctgctattctattagt

attcaactcctgatgggagcagatggagattcccacagccaaatattagg
cagagcttaggagacctacggaagaaaggaaggaaggattagaggaatca
gagggatcaaggacaccataagaacttggctcacagaatcaactgaccag
ggctcaagtaggatcgcaaaaaatcatgtagcctatatgggtctgaccta
ggtcctctgcatatatattatggttggatatcttggtgttcttgtggaat
ttgtaattgtggtatggggtctgtcttttaactctttagactccctttag
gacccttttcctcctactgggtcgcctcgccattttttgatatgagaaaa
tgtgtttggtcgtattgtagcttgttatgccatatttggttattgtacct
ggaagtcctgctctttttttgagaggagttgaagggggtgggtgaggaga
gcatctgggaaaattggaaagtggaggttaggagtgaaattgggggaatt
ttttttttttttttcttgtttttttatta
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chrX_63480782_63481927
seq2: B6Ng01-310G02.b_45_1176 (reverse)

seq1  ACTAATAAGGATTAGCAGACACAGTGTGAAACTCTCATTCGAT-ACACAG  49
      |||||||  || |||||||||||||||| |||  ||| ||||| ||||||
seq2  ACTAATA--GAATAGCAGACACAGTGTGGAACCTTCA-TCGATAACACAG  47

seq1  ATTCTTTGACTCTTACGTTATGGTATAAAGTATTAGATACCTTTGTCAAA  99
      | |||||||||| |||| ||| |||||||||| |||||||| ||||||||
seq2  AATCTTTGACTC-TACG-TAT-GTATAAAGTA-TAGATACC-TTGTCAAA  92

seq1  TTGTTTTATTATTTGTGTGTAGGGACATTTTGCTTACATGTATTTCTATG  149
      |   ||||||||||||||||||||||| ||||| |||||||| |||||||
seq2  T--GTTTATTATTTGTGTGTAGGGACA-TTTGC-TACATGTA-TTCTATG  137

seq1  TACTGCATGCATACTTGTTGCTCAAGGAGGCAGAAGATAGCATCAGATTC  199
      |||||||||||||||   ||||||||||||||||||||||||||||||||
seq2  TACTGCATGCATACT--GTGCTCAAGGAGGCAGAAGATAGCATCAGATTC  185

seq1  TCTGGAATTGCAGGTACAGACTGTTATGAGACATTAAATGGGTGCTGGGA  249
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTGGAATTGCAGGTACAGACTGTTATGAGACATTAAATGGGTGCTGGGA  235

seq1  AATAAACTTAGGTTCTACTAAAAAGCAGACAGTGCTCTTAACTTCTGGAC  299
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATAAACTTAGGTTCTACTAAAAAGCAGACAGTGCTCTTAACTTCTGGAC  285

seq1  CATTTCTTTAATACCATGTTTTTGTTTTTATTAACATATGTTAATTATAC  349
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATTTCTTTAATACCATGTTTTTGTTTTTATTAACATATGTTAATTATAC  335

seq1  ATAATAATGAGTTTCCTTATGATATTTTTGTATGTGTATATAGTGAACTT  399
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATAATAATGAGTTTCCTTATGATATTTTTGTATGTGTATATAGTGAACTT  385

seq1  TGACCATAATTGCCTACAATTACCACCTCTTGTCCCTTACATTTCTATAA  449
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGACCATAATTGCCTACAATTACCACCTCTTGTCCCTTACATTTCTATAA  435

seq1  ATACTCTTCATTTTATTGTTTGTATTTCTTAGCAACATATTAGTGATCAC  499
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATACTCTTCATTTTATTGTTTGTATTTCTTAGCAACATATTAGTGATCAC  485

seq1  AGAACCCAGAGCAAGCTTTCCAGACCAATGTCTAAGTTACACTTTACTTT  549
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAACCCAGAGCAAGCTTTCCAGACCAATGTCTAAGTTACACTTTACTTT  535

seq1  TTAGTTTTCTCATGTGATTTATTTTTTCTACAAAGAGATTATTTGTTTGG  599
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAGTTTTCTCATGTGATTTATTTTTTCTACAAAGAGATTATTTGTTTGG  585

seq1  AGTACAAACCTATTACCAAAGCACTGTAATCTTTGATGGCCTATAACCAA  649
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTACAAACCTATTACCAAAGCACTGTAATCTTTGATGGCCTATAACCAA  635

seq1  CTCATAAATAAAATGGAAAATAAAATGTATATTTCTATTGTTTTTCATGT  699
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCATAAATAAAATGGAAAATAAAATGTATATTTCTATTGTTTTTCATGT  685

seq1  ACACTCAACTTTATATGATGACAGCACCATCAACACATATCCTGATAGGT  749
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACACTCAACTTTATATGATGACAGCACCATCAACACATATCCTGATAGGT  735

seq1  GAATCACATACTACTTACAGAAAAATATATTGACACTAAAACCAATGCAA  799
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATCACATACTACTTACAGAAAAATATATTGACACTAAAACCAATGCAA  785

seq1  CCTTTATCTCCATCTTCCCACTGTTTTCTGTGCTAAAAGTCTCTAAAACT  849
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTTTATCTCCATCTTCCCACTGTTTTCTGTGCTAAAAGTCTCTAAAACT  835

seq1  GTGTTCTTGAACTATTGCTCTGCTATACTTAGTTCTTTTAAAGATGTTAC  899
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGTTCTTGAACTATTGCTCTGCTATACTTAGTTCTTTTAAAGATGTTAC  885

seq1  CAATGATGAAATTTGAATAATTAGCTCAATGTGCTCAGCAGATAATAGGC  949
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAATGATGAAATTTGAATAATTAGCTCAATGTGCTCAGCAGATAATAGGC  935

seq1  TAGTAATCAGTTGAATGATAGTATCCAAAGCTTAGAAAATTTCTCTTTTG  999
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGTAATCAGTTGAATGATAGTATCCAAAGCTTAGAAAATTTCTCTTTTG  985

seq1  AATCTTTTTGAGGGTTGTTGTGAGGAGGCAAAGTCTAACGTGGTATTTTA  1049
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATCTTTTTGAGGGTTGTTGTGAGGAGGCAAAGTCTAACGTGGTATTTTA  1035

seq1  GGTAGTGTGATGGTTAGGGTTTTGAATTTTTAAAATATTTTTATTGTTAT  1099
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTAGTGTGATGGTTAGGGTTTTGAATTTTTAAAATATTTTTATTGTTAT  1085

seq1  ATGTATGGGTATTTGTTTATATATACATGTAGGCATCATGTGAATTC  1146
      |||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGTATGGGTATTTGTTTATATATACATGTAGGCATCATGTGAATTC  1132


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