BAC Information

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BAC

Clone NameB6Ng01-311F03
ChromosomeX (Build37)
Map Location 89,659,308 - 89,659,407
singlet/doubletsinglet
Overlap geneMageb18
Upstream geneEG667988, EG667993, EG385489, 1700084M14Rik, EG236891, LOC629542, Mageb5, LOC673766, LOC633484, LOC674396, EG278087, Mageb1, EG236892, EG236893, EG436259, EG668061
Downstream geneEG546347, LOC629568, LOC100042663, Rp23-438h3.2, Arx, Pola1
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-311F03.bB6Ng01-311F03.g
ACCGA103069GA103070
length911700
definitionB6Ng01-311F03.b B6Ng01-311F03.g
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattctcaactgaggaatactgaatggctgagaagcacctgaaaaaatg
ttcagcatccttaatcatcagggaaatgcaaatcaaaacaactctgagat
tccacctcacaccagtcagaatggctaaggtcaaaaattcagttgacagc
agatgctggtgaggatgtggagaaagaggaacactcctccattgttggtg
ggatttcaagcttgtacaaccaatctggaaatcagtctggcgattcctca
gtaaattggacatagtattaccagaggatcctgcaatacctctcctaggc
atatatccagaagatgttccaactggtaagaaggacatatgctccactgt
gttcatagcagccttatttataatagccagaagctggaaagaacctagat
gcccctcaacagatgaatggatacagaaaatgtggtacatttacacaatg
gagtactactcagctattttttttaattcggtattttcctcgtttacatt
ttaaatgctatcccaaaggtcccccatacccacgcccccaatcccctacc
cacccactccccctttttggccctggcgttcccctgtactggggcatata
aagtttgcaagtccaatgggcctctcttttgcagtgatggctgactaggc
catcttttgatacatatgcagctagagtcaagagctccggggtactggtt
agtttcataatgttgttccacctatagggttgcagatccctttagctcct
tggggtacttttctctagctcctccattggggagccctgtgattccatcc
attagctgactgtgagcatccacttctgtgtttgctaagccccggcatta
gtctcataagagacagctaccatctgggtacattcgagaaaaccttgcaa
gagtgatgaat
gaattctgtttagctctgtgcctcatttttaatatggttatatagtttgt
tggtttctaacttcttgagttcttaatatattttgaatattagacctctg
tcagatgtagggttggtaaatatcttttccgtgatggtgagttttattta
cagtgtctttgtctttgacttacagaagcttcccagtttcatgaggaccc
tattattaattattgatattagtgcctgagccattgctgacttgttcagg
aagttgtcttctgtaccaatgagttcaaagttatgagttccctactttct
gttctattaaatttagtgtatctggttttatgttgagatcttgatccatt
tgggattgagttttgtgcacgttggtaaatatggatttatttccaatctt
ctacatgcagacatcccgttagatcactaccatttgttaaagatgcattc
cctttaacattgtatagttttgacttctatatcaagagtcaattatcctt
aggtgtgtaagtttatttctaggtcttcaattttattccattgatcaaca
tgtctattcctataccaatatcacacattttttattactatagctctatt
ggatagcttgaagtcagggatggtgatatctccagaagttcttttattgt
tcagtacagttttggctattctgagttttttgttgtttgttgttttgttt

quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chrX_89659308_89659407
seq2: B6Ng01-311F03.g_328_430 (reverse)

seq1  AAACTCAATCCCAAATGGATCAAAATCCTCAACATAAAACTAAATACACT  50
      ||||||||||||||||||||||| || ||||||||||||| | |||||||
seq2  AAACTCAATCCCAAATGGATCAAGAT-CTCAACATAAAACCAGATACACT  49

seq1  GATCCTGATAGACATGAAAATGGGGA----ATAGCCTTGAACTCATTGGC  96
       |   | |||||   |||| | ||||    ||| | ||||||||||||| 
seq2  AAATTTAATAGAACAGAAAGTAGGGAACTCATAACTTTGAACTCATTGGT  99

seq1  ACAG  100
      ||||
seq2  ACAG  103