MoG+ -Mouse Genome database with high added value-

BAC Information

BAC name
Region	Chromosome -
Gene	search by nearby gene name.
Format	rows / page	Page	1

BAC

Clone Name	B6Ng01-316J06
Chromosome	X (Build37)
Map Location	24,165,697 - 24,287,105
singlet/doublet	doublet
Overlap gene	none
Upstream gene	Wdr44, EG236749, EG214450, EG245376, LOC546271, LOC100043957, LOC100043206, LOC669000, LOC629204, EG546272, LOC100043216
Downstream gene	EG546282, LOC100040417, LOC100040428, LOC100040433, Xmr, LOC100038968, LOC100038977, LOC100038997, LOC664810
Link	Open Mouse BAC browser

Click to get alignment info.

name	Wdr44 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:72404 MGI:1919654
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	EG236749 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:236749 MGI:3648288
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	EG214450 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:214450 MGI:3648623
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 8 Proteins pseudo : _no_value

name	EG245376 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:245376 MGI:3648554
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	LOC546271 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:546271
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 2 mRNAs, 44 ESTs

name	LOC100043957 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:100043957
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 5 Proteins

name	LOC100043206 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:100043206
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 3 ESTs

name	LOC669000 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:669000
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 5 Proteins pseudo : _no_value

name	LOC629204 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:629204
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 2 mRNAs, 5 ESTs, 5 Proteins pseudo : _no_value

name	EG546272 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:546272 MGI:3643862
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 5 mRNAs, 11 ESTs, 5 Proteins

name	LOC100043216 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:100043216
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 5 mRNAs, 7 ESTs, 5 Proteins

name	EG546282 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:546282 MGI:3646322
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	LOC100040417 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:100040417
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 11 ESTs, 5 Proteins pseudo : _no_value

name	LOC100040428 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:100040428
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 66 ESTs

name	LOC100040433 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:100040433
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 12 ESTs, 2 Proteins pseudo : _no_value

name	Xmr (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:382277
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	LOC100038968 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:100038968
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 4 ESTs, 5 Proteins pseudo : _no_value

name	LOC100038977 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:100038977
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 5 mRNAs, 3 ESTs, 5 Proteins

name	LOC100038997 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:100038997
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 5 ESTs, 5 Proteins

name	LOC664810 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:664810
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 3 ESTs, 5 Proteins pseudo : _no_value

name	Wdr44 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:124249072 GeneID:72404 MGI:1919654
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : WD repeat domain 44 transcript_id : NM_175180.2

name	EG236749 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:142362382 GeneID:236749 MGI:3648288
definition	exception : mismatches in transcription note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : predicted gene, EG236749 transcript_id : NM_001034864.2

name	EG245376 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:126157496 GeneID:245376 MGI:3648554
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : predicted gene, EG245376 transcript_id : NM_001081666.1

name	LOC546271 (CDS detail)
type	mRNA
link	vega ensembl NCBI
xref	GI:149271011 GeneID:546271
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 2 mRNAs, 44 ESTs product : similar to LOC635138 protein transcript_id : XM_001478408.1

name	LOC100043957 (CDS detail)
type	mRNA
link	vega ensembl NCBI
xref	GI:149271064 GeneID:100043957
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 5 Proteins product : similar to XMR transcript_id : XM_001481261.1

name	LOC100043206 (CDS detail)
type	mRNA
link	vega ensembl NCBI
xref	GI:149271013 GeneID:100043206
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 3 ESTs product : hypothetical protein LOC100043206 transcript_id : XM_001478415.1

name	EG546272 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:94406980 GeneID:546272 MGI:3643862
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 3 mRNAs, 11 ESTs, 5 Proteins product : predicted gene, EG546272, transcript variant 2 transcript_id : XM_620960.3

name	EG546272 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:149271016 GeneID:546272 MGI:3643862
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 2 mRNAs, 9 ESTs, 5 Proteins product : predicted gene, EG546272, transcript variant 1 transcript_id : XM_001478430.1

name	LOC100043216 (CDS detail)
type	mRNA
link	vega ensembl NCBI
xref	GI:149271020 GeneID:100043216
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 3 mRNAs, 6 ESTs, 5 Proteins product : hypothetical protein LOC100043216, transcript variant 2 transcript_id : XM_001478456.1

name	LOC100043216 (CDS detail)
type	mRNA
link	vega ensembl NCBI
xref	GI:149271018 GeneID:100043216
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 2 mRNAs, 6 ESTs, 5 Proteins product : hypothetical protein LOC100043216, transcript variant 1 transcript_id : XM_001478447.1

name	EG546282 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:126090645 GeneID:546282 MGI:3646322
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : predicted gene, EG546282 transcript_id : NM_001081657.1

name	LOC100040428 (CDS detail)
type	mRNA
link	vega ensembl NCBI
xref	GI:149271221 GeneID:100040428
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 66 ESTs product : hypothetical protein LOC100040428 transcript_id : XM_001474898.1

name	Xmr (CDS detail)
type	mRNA
link	vega ensembl NCBI
xref	GI:100816606 GeneID:382277
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : Xmr protein transcript_id : NM_001040669.1

name	LOC100038977 (CDS detail)
type	mRNA
link	vega ensembl NCBI
xref	GI:149271231 GeneID:100038977
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 3 mRNAs, 3 ESTs, 5 Proteins product : hypothetical protein LOC100038977, transcript variant 2 transcript_id : XM_001472083.1

name	LOC100038977 (CDS detail)
type	mRNA
link	vega ensembl NCBI
xref	GI:149271229 GeneID:100038977
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 2 mRNAs, 2 ESTs, 5 Proteins product : hypothetical protein LOC100038977, transcript variant 1 transcript_id : XM_001472060.1

name	LOC100038997 (CDS detail)
type	mRNA
link	vega ensembl NCBI
xref	GI:149271233 GeneID:100038997
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 5 ESTs, 5 Proteins product : similar to XMR transcript_id : XM_001472117.1

name	Wdr44 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:124249073 GeneID:72404 MGI:1919654
definition	codon_start : 1 product : WD repeat domain 44 protein_id : NP_780389.2

name	EG236749 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:85702205 GeneID:236749 MGI:3648288
definition	codon_start : 1 exception : mismatches in translation note : novel protein similar to testis derived transcript (Tes) product : similar to hypothetical protein protein_id : NP_001030036.1

name	EG245376 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:126157497 GeneID:245376 MGI:3648554
definition	GO_function : GO:0008270 - zinc ion binding [Evidence IEA] codon_start : 1 product : hypothetical protein LOC245376 protein_id : NP_001075135.1

name	LOC546271 (CDS detail)
type	CDS
link	vega ensembl NCBI
xref	GI:149271012 GeneID:546271
definition	codon_start : 1 product : similar to LOC635138 protein protein_id : XP_001478458.1

name	LOC100043957 (CDS detail)
type	CDS
link	vega ensembl NCBI
xref	GI:149271065 GeneID:100043957
definition	codon_start : 1 product : similar to XMR protein_id : XP_001481311.1

name	LOC100043206 (CDS detail)
type	CDS
link	vega ensembl NCBI
xref	GI:149271014 GeneID:100043206
definition	codon_start : 1 product : hypothetical protein protein_id : XP_001478465.1

name	EG546272 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:149271017 GeneID:546272 MGI:3643862
definition	codon_start : 1 product : similar to XMR isoform 1 protein_id : XP_001478480.1

name	EG546272 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:83000007 GeneID:546272 MGI:3643862
definition	codon_start : 1 product : similar to XMR isoform 2 protein_id : XP_620960.2

name	LOC100043216 (CDS detail)
type	CDS
link	vega ensembl NCBI
xref	GI:149271019 GeneID:100043216
definition	codon_start : 1 product : hypothetical protein isoform 1 protein_id : XP_001478497.1

name	LOC100043216 (CDS detail)
type	CDS
link	vega ensembl NCBI
xref	GI:149271021 GeneID:100043216
definition	codon_start : 1 product : hypothetical protein isoform 2 protein_id : XP_001478506.1

name	EG546282 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:126090646 GeneID:546282 MGI:3646322
definition	codon_start : 1 note : novel protein similar to Xlr-related, meiosis regulated (Xmr) product : hypothetical protein LOC546282 protein_id : NP_001075126.1

name	LOC100040428 (CDS detail)
type	CDS
link	vega ensembl NCBI
xref	GI:149271222 GeneID:100040428
definition	codon_start : 1 product : hypothetical protein protein_id : XP_001474948.1

name	Xmr (CDS detail)
type	CDS
link	vega ensembl NCBI
xref	GI:100816607 GeneID:382277
definition	codon_start : 1 product : Xmr protein protein_id : NP_001035759.1

name	LOC100038977 (CDS detail)
type	CDS
link	vega ensembl NCBI
xref	GI:149271230 GeneID:100038977
definition	codon_start : 1 product : hypothetical protein isoform 1 protein_id : XP_001472110.1

name	LOC100038977 (CDS detail)
type	CDS
link	vega ensembl NCBI
xref	GI:149271232 GeneID:100038977
definition	codon_start : 1 product : hypothetical protein isoform 2 protein_id : XP_001472133.1

name	LOC100038997 (CDS detail)
type	CDS
link	vega ensembl NCBI
xref	GI:149271234 GeneID:100038997
definition	codon_start : 1 product : similar to XMR protein_id : XP_001472167.1

name	EG214450 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:214450
definition	number : 1 pseudo : _no_value

name	LOC669000 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:669000
definition	number : 1 pseudo : _no_value

name	LOC669000 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:669000
definition	number : 2 pseudo : _no_value

name	LOC669000 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:669000
definition	number : 3 pseudo : _no_value

name	LOC669000 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:669000
definition	number : 4 pseudo : _no_value

name	LOC669000 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:669000
definition	number : 5 pseudo : _no_value

name	LOC669000 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:669000
definition	number : 6 pseudo : _no_value

name	LOC669000 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:669000
definition	number : 7 pseudo : _no_value

name	LOC669000 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:669000
definition	number : 8 pseudo : _no_value

name	LOC629204 (CDS detail)
type	misc_RNA
link	vega ensembl NCBI
xref	GI:149271015 GeneID:629204
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 2 mRNAs, 5 ESTs, 5 Proteins product : hypothetical LOC629204 pseudo : _no_value transcript_id : XR_035701.1

name	LOC100040417 (CDS detail)
type	misc_RNA
link	vega ensembl NCBI
xref	GI:149271220 GeneID:100040417
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 11 ESTs, 5 Proteins product : similar to XMR pseudo : _no_value transcript_id : XR_031969.1

name	LOC100040433 (CDS detail)
type	misc_RNA
link	vega ensembl NCBI
xref	GI:149271223 GeneID:100040433
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 12 ESTs, 2 Proteins product : similar to Xlr-like pseudo : _no_value transcript_id : XR_031984.1

name	LOC100038968 (CDS detail)
type	misc_RNA
link	vega ensembl NCBI
xref	GI:149271228 GeneID:100038968
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 4 ESTs, 5 Proteins product : similar to Sycp3 like X-linked pseudo : _no_value transcript_id : XR_030540.1

name	LOC664810 (CDS detail)
type	misc_RNA
link	vega ensembl NCBI
xref	GI:149271237 GeneID:664810
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 3 ESTs, 5 Proteins product : hypothetical LOC664810 pseudo : _no_value transcript_id : XR_001649.2

clone name	MSMg01-079G17
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-547M10
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-335L15
singlet/doublet	doublet
plural/unique	plural

clone name	MSMg01-536M02
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-142N05
singlet/doublet	singlet
plural/unique	plural

clone name	MSMg01-167D20
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-053P14
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-053L03
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-139N23
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-548G17
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-352C24
singlet/doublet	singlet
plural/unique	plural

clone name	MSMg01-385A01
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-177M12
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-411B03
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-304I16
singlet/doublet	singlet
plural/unique	plural

clone name	B6Ng01-014I03
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-194J12
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-123N01
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-332G13
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-329A09
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-310H07
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-048G01
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-005M01
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-234M13
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-241N04
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-129J11
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-181I03
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-175C09
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-307H18
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-028A21
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-110P19
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-293E10
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-339K11
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-182B06
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-044B04
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-221E01
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-297N03
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-118K01
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-086N23
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-013G04
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-084A24
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-316J06
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-259B03
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-306K11
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-031D01
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-329D15
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-099I23
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-232P15
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-291H09
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-269L22
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-348C17
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-029A18
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-293F21
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-043I05
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-174F24
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-312C12
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-076L14
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-258G14
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-125L18
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-103O19
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-127D05
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-349L06
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-323E07
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-102F14
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-047F07
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-150L01
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-120J12
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-139D11
singlet/doublet	singlet
plural/unique	unique

BAC End Information

BAC end	BAC-end 1	BAC-end 2
end name	B6Ng01-316J06.b	B6Ng01-316J06.g
ACC	GA106938	GA106939
length	1,088	286
definition	B6Ng01-316J06.b	B6Ng01-316J06.g
singlet/doublet	doublet	doublet
BLAST hit	unique	unique
Map location.	(24,165,697 - 24,166,423)	(24,286,820 - 24,287,105)
sequence	gaattctttgtttagctctgtaccccatttttaatagggtcattttttct ctggcatctaacttcttgagttctttgtatgtattggattttaggtttct agttgatgtaggattgttaaaaatttttcccattctgttagttttccatt ttgtcctattgacagtgtcctttgccttacagaagctttgcaattttatg aggtcccatttgttaactcttgtttttcaggaaattgtcccctgtgccca tgtgcccaagactcttccccacttacttttctattagtttcaatatatct ggttttatgaggaggtccttgatccatttggaattgagctttgtacgagg aggcaagaatggttcaatttgcacttttctacaagctaacttctacttga aacagcaccttctgttgaaaatgctgacttttttatattggattattgtt agctcccttgtcaaagaacaagtgaccatatgtgtgttgattcatttctg gttctcaatcccattccactgatctacatgcctgtctctgtaccaatacc atgcagttttttttttttgtttgtttttttaattacaattgctctgtaat acaacttgaggtcagggaatgtggttccaccagaagttcttttattgttg agaatagttttcgctatcctaggttttttgttactcccaataaattttca aattgttgtttcttttgagataacccccactctagttcttcaggacccgc atgaagaacaagctgtacatctactaccctttaagctgagaggcctagat ccagcctgtgtattttgttagttacttagaagctgaatagttaatatagt ttgttgttcaggagcttttgggctttaattcttggcattatttgtttttc tctctcatgggaactatacactttagcattgtgcaccactaccacatttc accaaccaaaagttgaattcccatcaaaatcctccaaacctccacaggtt aatcaatgaagttagtcccaacttgatttcctaatgtctctttctgtggt ttgccttctttaaccatttgggagaagaattggacatt	tctcttgttcttcagttagggttaggctgcagcatctgctgaaaatcatc cctagtaggctgatgagagaacataagggactccaccaacactgtgaggc attggggatcctctgagaagagggggtgtttagtttcccagttataaaaa tcagcagaggaaaatgaccagtactgaagggattgaagattgggcgagtc cactggattccattcggactctgcactctccagctcagtgtactcggagc aggtccgtaggcctggacacttgggggggggggttg
quality values	Open. Hide. 47 29 24 32 58 54 58 58 58 58 58 58 36 38 54 62 62 62 62 62 62 56 62 62 62 47 41 62 62 62 62 41 56 43 56 31 32 49 44 56 47 62 62 62 62 62 62 62 62 62 62 62 62 59 62 62 62 62 59 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 59 62 62 62 62 62 62 62 62 62 59 59 62 62 62 59 62 62 62 62 62 62 59 59 62 62 62 62 59 59 62 62 62 62 62 59 59 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 59 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 59 62 62 62 62 62 62 62 62 59 62 62 62 62 59 62 62 62 62 62 62 62 62 62 54 54 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 59 62 62 62 62 62 62 62 62 62 62 62 62 62 62 59 62 62 62 54 54 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 59 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 59 59 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 59 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 54 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 49 43 62 62 62 59 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 59 62 62 59 62 62 62 62 62 62 62 62 54 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 54 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 56 54 47 56 62 62 62 62 54 47 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 52 48 62 62 62 62 62 42 62 62 62 62 62 62 52 62 62 62 62 54 47 49 62 62 62 62 62 62 35 31 30 43 30 30 43 43 58 52 58 31 35 58 49 58 45 50 58 50 58 32 47 58 54 27 58 54 42 52 52 54 58 58 58 43 46 42 58 42 35 58 54 58 34 58 58 47 58 52 54 58 45 54 54 36 42 54 52 52 52 52 52 52 22 54 40 58 58 54 36 32 54 32 54 42 52 42 54 42 45 33 52 34 31 29 42 37 30 58 41 22 29 58 50 50 58 42 30 50 50 35 58 50 50 32 58 58 58 46 45 39 51 32 32 23 32 58 58 51 51 37 39 50 52 40 35 37 41 53 46 50 41 40 35 10 44 49 23 50 48 27 32 51 53 46 51 58 33 38 58 21 52 53 50 50 53 47 40 31 42 32 50 28 50 28 25 26 32 22 58 49 20 58 22 14 22 17 38 53 38 53 18 25 10 58 28 50 30 51 23 41 29 31 45 21 32 41 54 31 53 21 50 35 37 35 54 54 29 35 16 54 49 42 46 27 21 26 23 52 53 20 49 21 10 37 32 30 24 28 13 33 24 13 36 29 40 12 15 27 21 8 14 45 15 53 21 18 39 35 32 13 12 12 37 31 13 24 8 51 42 26 12 40 9 9 33 53 53 18 13 22 13 15 14 53 31 19 26 21 32 28 23 17 9 12 28 33 53 52 52 34 32 30 34 26 23 15 9 9 6 7 31 26 33 21 29 32 17 30 22 17 6 29 13 45 34 18 26 14 25 19 9 31 15 18 21 12 18 13 8 23 28 21 16 17 13 31 18 16 23 18 27 44 9 8 8 6 31 23 13 36 42 9 15 23 11 18 31 9 9 12 11 46 9 9 19 9 8 31 41 24 9 14 6 19 15 39 22 26 25 6 7 23 18 15 7 23 8 18 11 9 6 6 6 7 14 36 31 21 11 9 27 8 24 11 23 16 6 10 31 12 13 15 17 22 8 9 31 9 44 13 30 21 8 8 8 5 6 8 16 10 10 38 36 7 8 5 10 10 8 19 10 32 21 17 7 12 9 12 6 14 9 16 14 20 8 7 12 11 36 10 15 36 17 30 5 9 25 5 7 5 4 11 19 14 15 18 9 14 32	Open. Hide. 62 62 54 56 51 50 43 32 32 43 48 59 46 59 59 62 59 59 62 62 62 62 62 59 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 59 62 62 62 62 62 62 62 59 62 54 42 56 59 59 62 62 62 62 62 62 59 62 62 59 54 54 62 62 62 62 62 62 62 62 62 62 62 59 59 62 62 62 62 62 62 62 62 62 62 59 59 59 59 59 59 59 62 62 62 62 62 62 62 62 62 59 62 62 62 62 62 59 59 59 59 54 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 59 62 62 62 62 62 62 62 59 62 62 62 62 62 59 62 62 62 62 62 62 62 62 62 62 62 62 62 62 59 59 62 62 62 62 62 59 62 62 62 62 62 62 62 62 62 62 62 62 62 59 62 62 62 59 62 62 62 62 59 62 62 62 62 62 59 59 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 54 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 49 62 62 62 62 62 62 62 46 62 62 62 62 62 62 62 46 27 27 17

Alignment Information

BAC End 1

BAC End 2

seq1: chrX_24165697_24166423
seq2: B6Ng01-316J06.b_372_1134

seq1  ATTTGGAATTGAGCTTTGTACGAGGAGGCAAGAATGGTTCAATTTGCACT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTTGGAATTGAGCTTTGTACGAGGAGGCAAGAATGGTTCAATTTGCACT  50

seq1  TTTCTACAAGCTAACTTCTACTTGAAACAGCACCTTCTGTTGAAAATGCT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTCTACAAGCTAACTTCTACTTGAAACAGCACCTTCTGTTGAAAATGCT  100

seq1  GACTTTTTTATATTGGATTATTGTTAGCTCCCTTGTCAAAGAACAAGTGA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GACTTTTTTATATTGGATTATTGTTAGCTCCCTTGTCAAAGAACAAGTGA  150

seq1  CCATATGTGTGTTGATTCATTTCTGGTTCTCAATCCCATTCCACTGATCT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCATATGTGTGTTGATTCATTTCTGGTTCTCAATCCCATTCCACTGATCT  200

seq1  ACATGCCTGTCTCTGTACCAATACCATGCAGTTTTTTTTTTTTGTTTGTT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACATGCCTGTCTCTGTACCAATACCATGCAGTTTTTTTTTTTTGTTTGTT  250

seq1  TTTTTAATTACAATTGCTCTGTAATACAACTTGAGGTCAGGGAATGTGGT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTTAATTACAATTGCTCTGTAATACAACTTGAGGTCAGGGAATGTGGT  300

seq1  TCCACCAGAAGTTCTTTTATTGTTGAGAATAGTTTTCGCTATCCTAGGTT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCACCAGAAGTTCTTTTATTGTTGAGAATAGTTTTCGCTATCCTAGGTT  350

seq1  TTTTGTTACTCCCAATAAATTTTCAAATTGTTGTTTCTTTTGAGATAACC  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTGTTACTCCCAATAAATTTTCAAATTGTTGTTTCTTTTGAGATAACC  400

seq1  CCCACTCTAGTTCTTCAGGACCCGCATGAAGAACAAGCTGTACATCTACT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCACTCTAGTTCTTCAGGACCCGCATGAAGAACAAGCTGTACATCTACT  450

seq1  ACCC-TTAAGCTGAGAGGCCTAGATCCAGCCTGTGTATTTTGTTAGTTAC  499
      |||| |||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCCTTTAAGCTGAGAGGCCTAGATCCAGCCTGTGTATTTTGTTAGTTAC  500

seq1  TTAGAAGCTGAATAGTTAATATAGTTTGTTGTTCAGGAGCTTT--GGCTT  547
      |||||||||||||||||||||||||||||||||||||||||||  |||||
seq2  TTAGAAGCTGAATAGTTAATATAGTTTGTTGTTCAGGAGCTTTTGGGCTT  550

seq1  T-ATTCTT-GCATTATTTGTTTTTCTCTCTCAT-GGAACTATACAC-TTA  593
      | |||||| |||||||||||||||||||||||| |||||||||||| |||
seq2  TAATTCTTGGCATTATTTGTTTTTCTCTCTCATGGGAACTATACACTTTA  600

seq1  GCA-TGTGCA-CACTA-CACA-TTCAACACCCAAA--GTGAATT-CCATC  636
      ||| |||||| ||||| |||| |||| || |||||   |||||| |||||
seq2  GCATTGTGCACCACTACCACATTTCACCAACCAAAAGTTGAATTCCCATC  650

seq1  AAA--TCTCCAAAC--TCACAGGTT-ATCAATGA--GTAGTCC--AC-TG  676
      |||   ||||||||   |||||||| ||||||||   ||||||  || ||
seq2  AAAATCCTCCAAACCTCCACAGGTTAATCAATGAAGTTAGTCCCAACTTG  700

seq1  A-TTCCTA---TGTCTTTCTGTG--TTGC--TTTTTAACAATT--GGAGA  716
      | ||||||   | ||||||||||  ||||  | |||||| |||  |||||
seq2  ATTTCCTAATGTCTCTTTCTGTGGTTTGCCTTCTTTAACCATTTGGGAGA  750

seq1  AGA--TTGACATT  727
      |||  | ||||||
seq2  AGAATTGGACATT  763

seq1: chrX_24286820_24287105
seq2: B6Ng01-316J06.g_76_361 (reverse)

seq1  CAACCCCCCCCCCCAAGTGTCCAGGCCTACGGACCTGCTCCGAGTACACT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAACCCCCCCCCCCAAGTGTCCAGGCCTACGGACCTGCTCCGAGTACACT  50

seq1  GAGCTGGAGAGTGCAGAGTCCGAATGGAATCCAGTGGACTCGCCCAATCT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGCTGGAGAGTGCAGAGTCCGAATGGAATCCAGTGGACTCGCCCAATCT  100

seq1  TCAATCCCTTCAGTACTGGTCATTTTCCTCTGCTGATTTTTATAACTGGG  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCAATCCCTTCAGTACTGGTCATTTTCCTCTGCTGATTTTTATAACTGGG  150

seq1  AAACTAAACACCCCCTCTTCTCAGAGGATCCCCAATGCCTCACAGTGTTG  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAACTAAACACCCCCTCTTCTCAGAGGATCCCCAATGCCTCACAGTGTTG  200

seq1  GTGGAGTCCCTTATGTTCTCTCATCAGCCTACTAGGGATGATTTTCAGCA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGGAGTCCCTTATGTTCTCTCATCAGCCTACTAGGGATGATTTTCAGCA  250

seq1  GATGCTGCAGCCTAACCCTAACTGAAGAACAAGAGA  286
      ||||||||||||||||||||||||||||||||||||
seq2  GATGCTGCAGCCTAACCCTAACTGAAGAACAAGAGA  286

BAC Information

Search Parameter

Search Result

BAC

BAC End Information

Alignment Information