BAC Information

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BAC

Clone NameB6Ng01-316L13
ChromosomeX (Build37)
Map Location 84,678,760 - 84,679,946
singlet/doubletsinglet
Overlap genenone
Upstream geneIl1rapl1
Downstream geneLOC667876, EG667883
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-316L13.bB6Ng01-316L13.g
ACCGA107046GA107047
length9821,166
definitionB6Ng01-316L13.b B6Ng01-316L13.g
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattctttgcttagctctgtaccacattttttccccaaagacatggttt
ctctgtataatcctggctgacctggaactctctctgtagaccaggctgac
ctagaactcagaaatctgcctgcctctgcttcctgagtgctgggattaaa
ggcatgtgccaccactgcccagctgtaccccatttttaatggatatttat
ttggttctctggagtctaacttcttttttttatgttactctattttattt
tattttttttaattaggtattttcctcgtttacattttcaatgctatccc
aaaggtcccccatacccaccccccaatcccctacccacccactccccctt
tttggccctggtgttcccctgtactggggcatataaagtttgcaagtcca
atgggcctctctttgcagtgatggccgactaggccatcttttgatacata
tgcagctaaagacaagagctcccgggtactggttagttcatattgttgtt
ccacctatagggttgcagttccctttagctccttgggtaatttctctagc
tcctccattaggggccgtgtgacccatccaatagctgactgtgatcatcc
acttctgtgtttgctaggccctggcatagtctcacaagagagagctatat
ctgggtcctttcagcgaaatcttgctagtgtatgcaatggtgtcaacttc
ttaagttctttgtatatttcagatattagcccgctatcagatatagggtt
ggtaatgattttttttttcttaatctgtaggatgccattttgtcctatag
gagtcaaatgtcttaaaagatagctaacaattttcatatgggattacata
gctaaatgtaaactttaaaaaaatattttagccaggatactatttacaga
tgccaagaagtacttgcttctgatatagcatccgatataccttctgatat
agcctgattatagctgcttcctgaagaggctc
gaattcaattatatagatattaaattattctgagtttcaatctatttatt
tgcttggagccagaaggtatatgtcacactatgcatgtggaagttggagg
acaagttttcaacagaagttgaaagtagaaagcaatgggtcttcctttga
attcattttatccatcttggtgacaagtaatccagctcaatactctattt
tttaagtcattcaattatgtatttgggattatctttattgaatctataac
tatataacctagtgaataattatctgaatttatgtctcaaaacttagaaa
ttgaccctttatgtcattcttatatctgtagcttgcttaagtctaattaa
ataactagaattatctatgtatctatatgcatttttctactattgatgag
gcatacaacgtacaataagcatgttttaaatgaatgtgtggttatgtaag
taaatatttacattgagcttaagtctaattaaataactagaattatctat
atgcatttttctactattgatgaggcatacaacgtacaataagcatgttt
taaatgaatgtgtggttatgtaagtaaatatttacattgacagacattca
atatcttacgtgttagcacattcaaaatgtttgttttttaaagatatttt
gtgttagtgaatttggaataagtaatattactcctttacttataacacta
caagcagcatacatttttgaatcagagaaatttgattgtacaagtcagaa
tatacttcaaatctcagtaaagcctttatgatctaccaaacagtacatta
ctttgtattccttaggcaaacatttattcatgtatatttttacaaaactc
ctctgtttggatgacaaaataggtacagatgtacattatgaaagtattgt
tagtgttggatattttgcacctctgggatacttgcgagacactgggctca
taagaacatgatgagcacaggcaaacagcaatgatcaatttaacttcttc
cccaattagaggttcttacaggaaagtctgttggatggcaggctatgtcc
tgtaatttgctttatagagaatagcaggctcaaggccagattactttgaa
ttttattttgattccagcaagcagcgagcctgaactaattttcaagcatt
gcaagttatacaggtc
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chrX_84678760_84679946
seq2: B6Ng01-316L13.g_67_1232

seq1  GAATTCAATTATATAGATATTAAATTATTCTGAGTTTCAATCTATTTATT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCAATTATATAGATATTAAATTATTCTGAGTTTCAATCTATTTATT  50

seq1  TGCTTGGAGCCAGAAGGTATATGTCACACTATGCATGTGGAAGTTGGAGG  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCTTGGAGCCAGAAGGTATATGTCACACTATGCATGTGGAAGTTGGAGG  100

seq1  ACAAGTTTTCAACAGAAGTTGAAAGTAGAAAGCAATGGGTCTTCCTTTGA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAAGTTTTCAACAGAAGTTGAAAGTAGAAAGCAATGGGTCTTCCTTTGA  150

seq1  ATTCATTTTATCCATCTTGGTGACAAGTAATCCAGCTCAATACTCTATTT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTCATTTTATCCATCTTGGTGACAAGTAATCCAGCTCAATACTCTATTT  200

seq1  TTTAAGTCATTCAATTATGTATTTGGGATTATCTTTATTGAATCTATAAC  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTAAGTCATTCAATTATGTATTTGGGATTATCTTTATTGAATCTATAAC  250

seq1  TATATAACCTAGTGAATAATTATCTGAATTTATGTCTCAAAACTTAGAAA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATATAACCTAGTGAATAATTATCTGAATTTATGTCTCAAAACTTAGAAA  300

seq1  TTGACCCTTTATGTCATTCTTATATCTGTAGCTTGCTTAAGTCTAATTAA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGACCCTTTATGTCATTCTTATATCTGTAGCTTGCTTAAGTCTAATTAA  350

seq1  ATAACTAGAATTATCTATGTATCTATATGCATTTTTCTACTATTGATGAG  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATAACTAGAATTATCTATGTATCTATATGCATTTTTCTACTATTGATGAG  400

seq1  GCATACAACGTACAATAAGCATGTTTTAAATGAATGTGTGGTTATGTAAG  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCATACAACGTACAATAAGCATGTTTTAAATGAATGTGTGGTTATGTAAG  450

seq1  TAAATATTTACATTGAGCTTAAGTCTAATTAAATAACTAGAATTATCTAT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAATATTTACATTGAGCTTAAGTCTAATTAAATAACTAGAATTATCTAT  500

seq1  ATGCATTTTTCTACTATTGATGAGGCATACAACGTACAATAAGCATGTTT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGCATTTTTCTACTATTGATGAGGCATACAACGTACAATAAGCATGTTT  550

seq1  TAAATGAATGTGTGGTTATGTAAGTAAATATTTACATTGACAGACATTCA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAATGAATGTGTGGTTATGTAAGTAAATATTTACATTGACAGACATTCA  600

seq1  ATATCTTACGTGTTAGCACATTCAAAATGTTTGTTTTTTAAAGATATTTT  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATATCTTACGTGTTAGCACATTCAAAATGTTTGTTTTTTAAAGATATTTT  650

seq1  GTGTTAGTGAATTTGGAATAAGTAATATTACTCCTTTACTTATAACACTA  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGTTAGTGAATTTGGAATAAGTAATATTACTCCTTTACTTATAACACTA  700

seq1  CAAGCAGCATACATTTTTGAATCAGAGAAATTTGATTGTACAAGTCAGAA  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAGCAGCATACATTTTTGAATCAGAGAAATTTGATTGTACAAGTCAGAA  750

seq1  TATACTTCAAATCTCAGTAAAGCCTTTATGATCTACCAAACAGTACATTA  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATACTTCAAATCTCAGTAAAGCCTTTATGATCTACCAAACAGTACATTA  800

seq1  CTTTGTATTCCTTAGGCAAAACATTTATTCATGTATATTTTTACAAAACT  850
      ||||||||||||||||| ||||||||||||||||||||||||||||||||
seq2  CTTTGTATTCCTTAGGC-AAACATTTATTCATGTATATTTTTACAAAACT  849

seq1  CCTCTGTTTGGATGACAAAATAGGTACAGATGTACATTATGAAAGTATTG  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTCTGTTTGGATGACAAAATAGGTACAGATGTACATTATGAAAGTATTG  899

seq1  TTAGTGTTGGATATTTTGCACCTCTGGGATACTTGCGAGACACTGGGCTC  950
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAGTGTTGGATATTTTGCACCTCTGGGATACTTGCGAGACACTGGGCTC  949

seq1  AATAAGAACATGATGAGCAACAGGCAAAACAAGCAATGATCAAATTTAAT  1000
       ||||||||||||||||| |||||||||   |||||||||||| || | |
seq2  -ATAAGAACATGATGAGC-ACAGGCAAA--CAGCAATGATCAATTTAACT  995

seq1  TCTTCCCCCAATTTAGAGGTTCCTTACAGGGAAAGGCCTGTTGGATGGCA  1050
      ||||||||  | ||||||||| ||||||||  || | |||||||||||||
seq2  TCTTCCCC--AATTAGAGGTT-CTTACAGG--AAAGTCTGTTGGATGGCA  1040

seq1  GGCTATTGGTCCTGTAAATTGGCCTTTTATAGAGAATAGCAGGGCTCAAG  1100
      ||||||  ||||||||| |||    |||||||||||||||| ||||||||
seq2  GGCTAT--GTCCTGTAATTTG---CTTTATAGAGAATAGCA-GGCTCAAG  1084

seq1  GCACAGATTTACTTTGATTTTATTTTTGATTTAGAGCAAGCAGCAGAG-C  1149
      || |||| ||||||||| |||  |||||| ||  |||||||||| ||| |
seq2  GC-CAGA-TTACTTTGAATTTTATTTTGA-TTCCAGCAAGCAGC-GAGCC  1130

seq1  TGAATTATATTTTTAAAGATTGCAAGTTATAAAAGGTC  1187
      |||| || ||||| ||  |||||||||||| | |||||
seq2  TGAACTA-ATTTTCAAGCATTGCAAGTTAT-ACAGGTC  1166